Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0485
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0192 - 15308602-15308869,15309457-15309528,15310271-153103... 54 5e-08
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 50 6e-07
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 41 4e-04
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 41 5e-04
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381... 40 6e-04
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 40 8e-04
12_02_0846 - 23623624-23623784,23624076-23624258,23624601-236246... 39 0.002
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 39 0.002
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 38 0.003
08_01_0268 - 2167639-2167764,2167887-2167937,2169126-2169167,216... 36 0.010
02_05_0810 - 31934965-31935013,31935096-31935217,31935328-319355... 31 0.28
02_05_0506 + 29613307-29613601,29613641-29613678,29613679-296138... 31 0.28
07_03_1061 + 23651404-23651625,23651764-23652954 31 0.38
07_01_0284 - 2082249-2082256,2082496-2083009 31 0.38
12_02_0871 + 23865343-23866016,23866122-23866170,23866276-238663... 31 0.50
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 31 0.50
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 30 0.66
02_05_0061 + 25506648-25509399,25509564-25509901,25510392-255105... 30 0.66
02_04_0518 + 23601355-23602498,23603481-23603779 30 0.66
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 30 0.66
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 30 0.87
07_03_0824 + 21769569-21769689,21770891-21770959,21771047-217711... 30 0.87
11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357 29 1.1
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 29 1.1
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 29 1.1
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 29 1.1
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 29 1.5
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 29 2.0
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 29 2.0
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 29 2.0
07_01_0286 + 2086630-2086856,2087052-2087067 28 2.7
12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220... 28 3.5
09_01_0158 + 2332381-2333211 28 3.5
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 28 3.5
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 28 3.5
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 28 3.5
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 27 4.6
01_06_1533 + 38041499-38041681,38041853-38041985,38042816-380429... 27 4.6
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 27 6.1
08_02_1075 + 24149570-24149833,24150008-24150307 27 6.1
05_05_0170 + 22913791-22914315,22914418-22914581,22914675-229153... 27 6.1
10_08_0338 + 16916429-16916650,16916728-16917900 27 8.1
>03_03_0192 -
15308602-15308869,15309457-15309528,15310271-15310337,
15310449-15310528,15310636-15310714,15310815-15310890
Length = 213
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +3
Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
PP + SL V N+++RTT +DL +F+RCGEV DI IPRDR G
Sbjct: 9 PPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTG 54
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 50.4 bits (115), Expect = 6e-07
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 114 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
+GR PP I SL V N+++RTT +DL +F+R G+V D++IPRDR G
Sbjct: 4 FGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTG 54
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 105 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
+ YGRPP L V N++ PED+R FE+ G V D+Y+PR+
Sbjct: 51 RRGYGRPP----APTGLLVRNISLTARPEDIRIPFEQFGPVKDVYLPRN 95
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
SL V NL PEDLRR F + G + DIYIPRD G+
Sbjct: 42 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGE 80
>07_03_1316 +
25736931-25737206,25737276-25737329,25738036-25738189,
25740235-25740313,25740413-25740492,25740588-25740654,
25741548-25741619,25742071-25742223,25742309-25742392,
25742811-25742877
Length = 361
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3
Query: 180 TTPEDLRRVFERCGEVGDIYIPRDRTQG 263
TT +DL +FE+ GEV DIYIPRDR G
Sbjct: 163 TTADDLSPLFEKYGEVVDIYIPRDRRTG 190
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 320 LDTMDGRMLDGRELRXQMA 376
+D +DGR++DGRE+ Q A
Sbjct: 210 VDRLDGRVVDGREIMVQFA 228
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
SL V NL P+DLRR F + G V DIY+PRD G+
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGE 76
>12_02_0846 -
23623624-23623784,23624076-23624258,23624601-23624641,
23624746-23624910,23625808-23625885,23626024-23626169
Length = 257
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +3
Query: 117 GRPPPRI-------DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
GR PPR G SL V N+ EDLR FER G V D+Y+P+D G+
Sbjct: 20 GRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGE 76
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +3
Query: 117 GRPPPRI-------DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
GR PPR G SL V N+ EDLR FER G V D+Y+P+D G+
Sbjct: 20 GRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGE 76
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
VSL V NL PED++ F++ G V D+Y+P+D G+
Sbjct: 397 VSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGE 436
>08_01_0268 -
2167639-2167764,2167887-2167937,2169126-2169167,
2169343-2169449,2169536-2169604,2170542-2170665
Length = 172
Score = 36.3 bits (80), Expect = 0.010
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 123 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
PPP+ D +L + L+ RTT + L+ F + GEV + DR G
Sbjct: 28 PPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTG 74
>02_05_0810 -
31934965-31935013,31935096-31935217,31935328-31935519,
31937689-31937759,31938708-31938819,31938911-31939015
Length = 216
Score = 31.5 bits (68), Expect = 0.28
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
S+ V N+ Y TPE++++ F+ CG V + I D+
Sbjct: 91 SVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDK 125
>02_05_0506 +
29613307-29613601,29613641-29613678,29613679-29613802,
29614358-29614484,29614915-29615002,29615539-29615631,
29616380-29616529
Length = 304
Score = 31.5 bits (68), Expect = 0.28
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L + TT E LRR ++R GE+ + + DR G+
Sbjct: 41 VGGLAWETTSERLRRFYDRFGEILEAVVITDRHSGR 76
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 31.1 bits (67), Expect = 0.38
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L V +++ T + LR F R GEV + I RDR G+
Sbjct: 8 LFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGR 45
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 31.1 bits (67), Expect = 0.38
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 177 RTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLKKPWTRWTDE 341
RTT DLRR F+R G V DI++ R V+ + + K P +W +E
Sbjct: 118 RTTELDLRRHFKRYGYVADIWLRRRGGYAFVQLRTPSHAALALADKNPGRQWPEE 172
>12_02_0871 +
23865343-23866016,23866122-23866170,23866276-23866356,
23866599-23866718,23866957-23867055,23867135-23867194,
23867316-23867410,23867483-23867508,23869212-23869285,
23870194-23870259,23871027-23871099,23871585-23871622,
23873758-23873871,23876079-23876195,23876288-23876368,
23876468-23876536,23876631-23876669,23876809-23876973,
23877380-23877484,23877569-23877637,23877754-23877816,
23877903-23878021,23878124-23878348,23878409-23878610
Length = 940
Score = 30.7 bits (66), Expect = 0.50
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
V NL T E LR++FE CGEV + + R
Sbjct: 568 VGNLPANVTEEYLRKLFEHCGEVVRVAVSR 597
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 30.7 bits (66), Expect = 0.50
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
S+ V N+ Y TPE++++ F CG V + I D+
Sbjct: 83 SVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDK 117
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 30.3 bits (65), Expect = 0.66
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V + Y T DL VF + GEV D+ + RD+ GK
Sbjct: 40 VGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGK 75
>02_05_0061 +
25506648-25509399,25509564-25509901,25510392-25510593,
25510779-25510854,25512036-25512294
Length = 1208
Score = 30.3 bits (65), Expect = 0.66
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Frame = +3
Query: 48 FNNIV---LFNLFDLS*ISILLKMSY----GRPPPRIDGMVSLKVDNLTYRTTPEDLRRV 206
FNN + +LF+++ +SI L +SY G PP + + +L + Y ++
Sbjct: 504 FNNFIGTIPTSLFNITTLSIYLDISYNHLDGSIPPEVGNLPNLVYLDARYNQLSGEIPIT 563
Query: 207 FERCGEVGDIYIPRDRTQGKVEDS 278
FE+C + +Y+ + G + S
Sbjct: 564 FEKCQLLQILYLQNNSFIGNIPSS 587
>02_04_0518 + 23601355-23602498,23603481-23603779
Length = 480
Score = 30.3 bits (65), Expect = 0.66
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L VDN+ R ++LRR+F R GE+ + DR G+
Sbjct: 193 LFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQ 230
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 30.3 bits (65), Expect = 0.66
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
G + V L EDLR F + G + D YIP+D
Sbjct: 237 GNKKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIPKD 273
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
P D + L V L ED+R VF +CGEV I I + R
Sbjct: 247 PDGNDKTLELFVGGLPKDCVEEDIRVVFSQCGEVESIRIVKKR 289
>07_03_0824 +
21769569-21769689,21770891-21770959,21771047-21771153,
21771310-21771414
Length = 133
Score = 29.9 bits (64), Expect = 0.87
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
P D +L V L RTT + LR F + G+V + + DR G
Sbjct: 29 PLADPCNNLFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISG 73
>11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357
Length = 481
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L + +++ T + LR F++ GEV + I RDR G+
Sbjct: 8 LFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGR 45
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 111 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
+Y P P ++ L + NL Y + ED++ +F G+V I D++
Sbjct: 57 AYTHPTP-VETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKS 104
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L + T E LRR FE+ GE+ + + DR G+
Sbjct: 43 VGGLAWETPSEGLRRHFEQYGEILEAVVIADRLTGR 78
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 123 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
PPP L VD+L+ + L+ +FE GEV ++ + DR
Sbjct: 131 PPPE---STVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDR 171
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 123 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
P ++ L + NL Y + ED++ +F G+V I DR+
Sbjct: 64 PAANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRS 108
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
S+ V NL T L+R+FE GE+ + +P R
Sbjct: 283 SVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSR 317
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
S+ V NL T L+R+FE GE+ + +P R
Sbjct: 691 SVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSR 725
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 28.7 bits (61), Expect = 2.0
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +1
Query: 124 LRHESMAWSR*K*IILPTERRLKTYAAFSKGAEKLVIST--FPEIGHKGK*RIRLXEV-- 291
+R ++ AW +I R + Y A K E L+ ++ + ++GK RIR
Sbjct: 466 IRAKNNAW-----VIAKVTRGRELYMALEKAGETLLYASTAIEKFSNRGKRRIRRGRCEG 520
Query: 292 -FRAS*R*RSPGHDGRTNVGRQGTSRSDGAIW 384
+ AS G V RQGTS S ++W
Sbjct: 521 RWHASPSPEGFAGRGEREVARQGTSGSKCSLW 552
>07_01_0286 + 2086630-2086856,2087052-2087067
Length = 80
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 132 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
RI L V ++ +LR F R G+V DI++ RDR G
Sbjct: 2 RIPESARLSVGGVSPDMGDTELRDHFGRYGDVADIWLRRDRLTG 45
>12_02_0875 -
23920023-23920967,23921045-23921599,23921678-23922083,
23922175-23922452
Length = 727
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 177 RTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
RT E + R+F+ CG GD Y R G
Sbjct: 332 RTEVEQIHRIFKLCGSPGDAYWRRAAAGG 360
>09_01_0158 + 2332381-2333211
Length = 276
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +3
Query: 63 LFNLFDLS*ISILLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 242
L N +L + + G PP + G+++L V NL+ + R RC + I +
Sbjct: 95 LSNCTNLQSLDLSSNALSGAIPPELSGLLNLAVLNLSANRLSGAIPRDLARCAYLNVIDL 154
Query: 243 PRDRTQGKVED 275
++ G + D
Sbjct: 155 HANQLTGSIPD 165
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 147 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L + ++ T +D+R +FE G+V ++ + +DR G+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGE 161
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
P I+G + V NL + T +DL++ F C ++ I D+ G
Sbjct: 260 PKMIEGYNRVYVGNLAWDITEDDLKKFFSDC-KISSIRFGTDKETG 304
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 96 ILLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVG 230
I+ + S+ RP RI G+ V + + + P+ + + CG G
Sbjct: 1984 IIFRQSFNRPNLRIAGINKPDVRFVIHHSLPKSIEGYHQECGRAG 2028
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
V NL + + E L +F + G V ++Y+P+DR
Sbjct: 29 VGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
>01_06_1533 +
38041499-38041681,38041853-38041985,38042816-38042954,
38043331-38043367,38045606-38045897,38046384-38046502
Length = 300
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
V L + T E +R+ FE+ GE+ + + D+ G+
Sbjct: 20 VGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGR 55
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
G L V NL T + LR+VFE G+V + +P R +
Sbjct: 288 GARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPFARLE 327
>08_02_1075 + 24149570-24149833,24150008-24150307
Length = 187
Score = 27.1 bits (57), Expect = 6.1
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPE-DLRRVFERCGEVGDIYIPR 248
M + R P DG V ++ L T E DL R F+R G V ++ IPR
Sbjct: 1 MDFRRRKPPKDGRVFVR--GLAAGTAGEADLLRHFDRYGVVDEVSIPR 46
>05_05_0170 +
22913791-22914315,22914418-22914581,22914675-22915325,
22915425-22915542,22915635-22915823,22915948-22916118
Length = 605
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 391 GATISRHLXAKFPAVQHSSVHRVQGFFSVTTLE 293
GAT+ RHL + + + V V G F++T L+
Sbjct: 42 GATLGRHLARRLVQIGATDVFAVPGDFNLTLLD 74
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
L + +++ TT E LR F G+V + RD+ G+
Sbjct: 8 LFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGR 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,080,853
Number of Sequences: 37544
Number of extensions: 184581
Number of successful extensions: 524
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -