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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0485
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75755-1|CAA53383.1|  221|Homo sapiens PR264/SC35 protein.             90   2e-18
X62447-1|CAA44307.1|  221|Homo sapiens PR 264 protein.                 90   2e-18
BT007250-1|AAP35914.1|  221|Homo sapiens splicing factor, argini...    90   2e-18
BC070086-1|AAH70086.1|  221|Homo sapiens splicing factor, argini...    90   2e-18
BC066958-1|AAH66958.1|  179|Homo sapiens SFRS2 protein protein.        90   2e-18
BC001303-1|AAH01303.1|  221|Homo sapiens SFRS2 protein protein.        90   2e-18
BC000339-1|AAH00339.1|  221|Homo sapiens SFRS2 protein protein.        90   2e-18
AK223252-1|BAD96972.1|  221|Homo sapiens splicing factor, argini...    90   2e-18
AK093626-1|BAC04206.1|  186|Homo sapiens protein ( Homo sapiens ...    90   2e-18
AK092489-1|BAC03903.1|  201|Homo sapiens protein ( Homo sapiens ...    90   2e-18
M90104-1|AAA60306.1|  221|Homo sapiens splicing factor protein.        87   2e-17
BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.       85   9e-17
AF031165-1|AAK54350.1|  282|Homo sapiens SRp46 splicing factor p...    85   9e-17
AF031166-1|AAK54351.1|  272|Homo sapiens SRp46 splicing factor p...    69   6e-12
L03693-1|AAA60162.1|   34|Homo sapiens splicing factor protein.        64   1e-10
BC021715-1|AAH21715.1|  261|Homo sapiens serine-arginine repress...    40   0.003
AL353135-4|CAI16247.1|  262|Homo sapiens RP11-63L7.3 protein.          40   0.003
AF449428-1|AAL57515.1|  261|Homo sapiens SRrp35 protein.               40   0.003
U96074-1|AAC78728.1|  320|Homo sapiens translation initiation fa...    37   0.024
CR457134-1|CAG33415.1|  320|Homo sapiens EIF3S4 protein.               37   0.024
BT006889-1|AAP35535.1|  320|Homo sapiens eukaryotic translation ...    37   0.024
BC008469-1|AAH08469.1|  320|Homo sapiens eukaryotic translation ...    37   0.024
BC000733-1|AAH00733.1|  320|Homo sapiens eukaryotic translation ...    37   0.024
AF094850-1|AAG15419.1|  320|Homo sapiens eukaryotic translation ...    37   0.024
AF092453-1|AAG15396.1|  320|Homo sapiens eukaryotic translation ...    37   0.024
AF020833-1|AAB71866.1|  320|Homo sapiens eukaryotic translation ...    37   0.024
CR457272-1|CAG33553.1|  357|Homo sapiens PSPC1 protein.                37   0.032
BC014184-1|AAH14184.2|  393|Homo sapiens PSPC1 protein protein.        37   0.032
AL354808-5|CAI41005.1|  248|Homo sapiens paraspeckle component 1...    37   0.032
AL354808-4|CAI41004.1|  523|Homo sapiens paraspeckle component 1...    37   0.032
AK001817-1|BAA91924.1|  357|Homo sapiens protein ( Homo sapiens ...    37   0.032
AF449627-1|AAL59602.1|  393|Homo sapiens paraspeckle protein 1 b...    37   0.032
AF448795-1|AAL59601.1|  523|Homo sapiens paraspeckle protein 1 a...    37   0.032
BC071575-1|AAH71575.1|   69|Homo sapiens FUSIP1 protein protein.       36   0.073
BC010074-1|AAH10074.1|  173|Homo sapiens FUSIP1 protein protein.       36   0.073
BC005039-1|AAH05039.1|  262|Homo sapiens FUS interacting protein...    36   0.073
BC001107-1|AAH01107.1|  183|Homo sapiens FUS interacting protein...    36   0.073
AY150181-1|AAN65381.1|  183|Homo sapiens splicing factor SRp38-2...    36   0.073
AY150180-1|AAN65380.1|  262|Homo sapiens splicing factor SRp38 p...    36   0.073
AY048592-2|AAL06099.1|  262|Homo sapiens TLS-associated SR prote...    36   0.073
AY048592-1|AAL06098.1|  183|Homo sapiens TLS-associated SR prote...    36   0.073
AL590609-10|CAI14808.1|  262|Homo sapiens FUS interacting protei...    36   0.073
AL590609-9|CAI14807.1|  261|Homo sapiens FUS interacting protein...    36   0.073
AL590609-8|CAI14805.1|  173|Homo sapiens FUS interacting protein...    36   0.073
AL590609-7|CAI14806.1|  172|Homo sapiens FUS interacting protein...    36   0.073
AL590609-6|CAI14803.1|  183|Homo sapiens FUS interacting protein...    36   0.073
AL590609-5|CAI14804.1|  182|Homo sapiens FUS interacting protein...    36   0.073
AK222994-1|BAD96714.1|  262|Homo sapiens FUS interacting protein...    36   0.073
AK001286-1|BAA91601.1|  183|Homo sapiens protein ( Homo sapiens ...    36   0.073
AF449427-1|AAL57514.1|  262|Homo sapiens SRrp40 protein.               36   0.073
AF419332-1|AAL16666.1|  261|Homo sapiens TLS-associated protein ...    36   0.073
AF419331-1|AAL16665.1|  183|Homo sapiens TLS-associated protein ...    36   0.073
AF067730-1|AAC26727.1|  262|Homo sapiens TLS-associated protein ...    36   0.073
AF047448-1|AAC70918.1|  183|Homo sapiens TLS-associated protein ...    36   0.073
AL450998-14|CAH70862.1|  296|Homo sapiens SMART/HDAC1 associated...    32   0.90 
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated...    32   0.90 
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr...    32   0.90 
AL034555-6|CAI19528.1|  296|Homo sapiens SMART/HDAC1 associated ...    32   0.90 
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ...    32   0.90 
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc...    32   0.90 
BC012062-1|AAH12062.1|  407|Homo sapiens DAZ associated protein ...    31   1.2  
AY678451-1|AAV97647.1|  454|Homo sapiens DAZAP1/MEF2D fusion pro...    31   1.2  
AY547318-1|AAS55633.1|  236|Homo sapiens unknown protein.              31   1.2  
AL136305-1|CAC36889.1|  236|Homo sapiens protein ( Human DNA seq...    31   1.2  
AK095016-1|BAC04474.1|  211|Homo sapiens protein ( Homo sapiens ...    31   1.2  
AF181719-1|AAF78364.1|  407|Homo sapiens DAZ associated protein ...    31   1.2  
BC013889-1|AAH13889.1|  759|Homo sapiens RNA binding motif prote...    31   2.1  
AK222716-1|BAD96436.1|  759|Homo sapiens RNA binding motif prote...    31   2.1  
AK001239-1|BAA91575.1|  759|Homo sapiens protein ( Homo sapiens ...    31   2.1  
U38175-1|AAB41913.1|  326|Homo sapiens HuR RNA binding protein p...    30   2.7  
BT009793-1|AAP88795.1|  326|Homo sapiens ELAV (embryonic lethal,...    30   2.7  
BC130001-1|AAI30002.1|  255|Homo sapiens LOC390748 protein protein.    30   2.7  
BC003376-1|AAH03376.1|  326|Homo sapiens ELAV (embryonic lethal,...    30   2.7  
AC003982-3|AAB95636.1|  362|Homo sapiens WUGSC:H_166H1.2 protein.      30   2.7  
AB073212-1|BAB70469.1|  179|Homo sapiens Musashi1 protein.             30   2.7  
AB072592-1|BAB69769.1|  181|Homo sapiens Musashi1 protein.             30   2.7  
AB072591-1|BAB69768.1|  181|Homo sapiens Musashi1 protein.             30   2.7  
AB072590-1|BAB69767.1|  180|Homo sapiens Musashi1 protein.             30   2.7  
AB012851-1|BAA33962.1|  362|Homo sapiens Musashi protein.              30   2.7  
BC001526-1|AAH01526.1|  328|Homo sapiens musashi homolog 2 (Dros...    30   3.6  
AK093888-1|BAC04244.1|  251|Homo sapiens protein ( Homo sapiens ...    30   3.6  
AJ405692-1|CAC03805.1|   63|Homo sapiens T-cell receptor beta ch...    29   6.3  
AF009786-1|AAB63916.1|  107|Homo sapiens T cell receptor beta ch...    29   6.3  
U63289-1|AAC50895.1|  482|Homo sapiens CUG-BP/hNab50 protein.          29   8.4  
BC031079-1|AAH31079.1|  483|Homo sapiens CUG triplet repeat, RNA...    29   8.4  
AJ405859-1|CAC03972.1|   66|Homo sapiens T-cell receptor beta ch...    29   8.4  
AJ405825-1|CAC03938.1|   65|Homo sapiens T-cell receptor beta ch...    29   8.4  
AJ007988-1|CAC20566.1|  486|Homo sapiens deadenylation factor CU...    29   8.4  
AF267534-1|AAF78956.1|  483|Homo sapiens CUG-binding protein A i...    29   8.4  
AF267533-1|AAF78955.1|  486|Homo sapiens CUG-binding protein LYL...    29   8.4  
AF248648-1|AAF86230.1|  486|Homo sapiens RNA-binding protein BRU...    29   8.4  
AB210019-1|BAE06101.1|  544|Homo sapiens CUGBP1 variant protein ...    29   8.4  

>X75755-1|CAA53383.1|  221|Homo sapiens PR264/SC35 protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>X62447-1|CAA44307.1|  221|Homo sapiens PR 264 protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>BT007250-1|AAP35914.1|  221|Homo sapiens splicing factor,
           arginine/serine-rich 2 protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>BC070086-1|AAH70086.1|  221|Homo sapiens splicing factor,
           arginine/serine-rich 2 protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>BC066958-1|AAH66958.1|  179|Homo sapiens SFRS2 protein protein.
          Length = 179

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49


>BC001303-1|AAH01303.1|  221|Homo sapiens SFRS2 protein protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>BC000339-1|AAH00339.1|  221|Homo sapiens SFRS2 protein protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>AK223252-1|BAD96972.1|  221|Homo sapiens splicing factor,
           arginine/serine-rich 2 variant protein.
          Length = 221

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>AK093626-1|BAC04206.1|  186|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36307 fis, clone THYMU2004906, moderately
           similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
          Length = 186

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49


>AK092489-1|BAC03903.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
          Length = 201

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>M90104-1|AAA60306.1|  221|Homo sapiens splicing factor protein.
          Length = 221

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+   VGD+YIPRDR
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDR 49



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 320 LDTMDGRMLDGRELRXQMA 376
           +D MDG +LDGRELR QMA
Sbjct: 72  MDAMDGAVLDGRELRVQMA 90


>BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.
          Length = 275

 Score = 85.0 bits (201), Expect = 9e-17
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+
Sbjct: 1   MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 48


>AF031165-1|AAK54350.1|  282|Homo sapiens SRp46 splicing factor
           protein.
          Length = 282

 Score = 85.0 bits (201), Expect = 9e-17
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+
Sbjct: 1   MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 48


>AF031166-1|AAK54351.1|  272|Homo sapiens SRp46 splicing factor
           protein.
          Length = 272

 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+
Sbjct: 1   DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 38


>L03693-1|AAA60162.1|   34|Homo sapiens splicing factor protein.
          Length = 34

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVF 209
           MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVF
Sbjct: 1   MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVF 34


>BC021715-1|AAH21715.1|  261|Homo sapiens serine-arginine repressor
           protein (35 kDa) protein.
          Length = 261

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL + N+   T PEDLRR F R G + D+YIP D
Sbjct: 4   YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44


>AL353135-4|CAI16247.1|  262|Homo sapiens RP11-63L7.3 protein.
          Length = 262

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL + N+   T PEDLRR F R G + D+YIP D
Sbjct: 4   YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44


>AF449428-1|AAL57515.1|  261|Homo sapiens SRrp35 protein.
          Length = 261

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL + N+   T PEDLRR F R G + D+YIP D
Sbjct: 4   YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44


>U96074-1|AAC78728.1|  320|Homo sapiens translation initiation
           factor eIF3 p44 subunit protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>CR457134-1|CAG33415.1|  320|Homo sapiens EIF3S4 protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>BT006889-1|AAP35535.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>BC008469-1|AAH08469.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>BC000733-1|AAH00733.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>AF094850-1|AAG15419.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit p42/p44 protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>AF092453-1|AAG15396.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit p42/p44 protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>AF020833-1|AAB71866.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           +P  R D   +++V NL+  T   DL+ +F   G +  IY+ +D+T G+
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278


>CR457272-1|CAG33553.1|  357|Homo sapiens PSPC1 protein.
          Length = 357

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 48  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 84


>BC014184-1|AAH14184.2|  393|Homo sapiens PSPC1 protein protein.
          Length = 393

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 84  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120


>AL354808-5|CAI41005.1|  248|Homo sapiens paraspeckle component 1
           protein.
          Length = 248

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 84  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120


>AL354808-4|CAI41004.1|  523|Homo sapiens paraspeckle component 1
           protein.
          Length = 523

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 84  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120


>AK001817-1|BAA91924.1|  357|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10955 fis, clone PLACE1000406, moderately
           similar to PTB-ASSOCIATED SPLICING FACTOR. ).
          Length = 357

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 48  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 84


>AF449627-1|AAL59602.1|  393|Homo sapiens paraspeckle protein 1 beta
           isoform protein.
          Length = 393

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 84  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120


>AF448795-1|AAL59601.1|  523|Homo sapiens paraspeckle protein 1
           alpha isoform protein.
          Length = 523

 Score = 36.7 bits (81), Expect = 0.032
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           L V NL    T ED +R+FER GE  +++I RDR  G
Sbjct: 84  LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120


>BC071575-1|AAH71575.1|   69|Homo sapiens FUSIP1 protein protein.
          Length = 69

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>BC010074-1|AAH10074.1|  173|Homo sapiens FUSIP1 protein protein.
          Length = 173

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>BC005039-1|AAH05039.1|  262|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>BC001107-1|AAH01107.1|  183|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AY150181-1|AAN65381.1|  183|Homo sapiens splicing factor SRp38-2
           protein.
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AY150180-1|AAN65380.1|  262|Homo sapiens splicing factor SRp38
           protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AY048592-2|AAL06099.1|  262|Homo sapiens TLS-associated SR protein
           2 protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AY048592-1|AAL06098.1|  183|Homo sapiens TLS-associated SR protein
           1 protein.
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL590609-10|CAI14808.1|  262|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL590609-9|CAI14807.1|  261|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 261

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL590609-8|CAI14805.1|  173|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 173

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL590609-7|CAI14806.1|  172|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 172

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL590609-6|CAI14803.1|  183|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL590609-5|CAI14804.1|  182|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 182

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AK222994-1|BAD96714.1|  262|Homo sapiens FUS interacting protein
           (serine-arginine rich) 1 isoform 2 variant protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AK001286-1|BAA91601.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
           Homo sapiens TLS-associated protein TASR-2 mRNA. ).
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AF449427-1|AAL57514.1|  262|Homo sapiens SRrp40 protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AF419332-1|AAL16666.1|  261|Homo sapiens TLS-associated protein
           TASR-2 protein.
          Length = 261

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AF419331-1|AAL16665.1|  183|Homo sapiens TLS-associated protein
           TASR-1 protein.
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AF067730-1|AAC26727.1|  262|Homo sapiens TLS-associated protein
           TASR-2 protein.
          Length = 262

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AF047448-1|AAC70918.1|  183|Homo sapiens TLS-associated protein
           TASR protein.
          Length = 183

 Score = 35.5 bits (78), Expect = 0.073
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251
           Y RPP       SL V N+   T  EDLRR F R G + D+Y+P D
Sbjct: 4   YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44


>AL450998-14|CAH70862.1|  296|Homo sapiens SMART/HDAC1 associated
           repressor protein (SHARP) protein.
          Length = 296

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
           +L + NL   TT  DLR +F+R GE+ DI I +
Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210


>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
           repressor protein (SHARP) protein.
          Length = 3664

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
           +L + NL   TT  DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471


>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
           protein.
          Length = 3261

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
           +L + NL   TT  DLR +F+R GE+ DI I +
Sbjct: 36  TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 68


>AL034555-6|CAI19528.1|  296|Homo sapiens SMART/HDAC1 associated
           repressor protein (SHARP) protein.
          Length = 296

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
           +L + NL   TT  DLR +F+R GE+ DI I +
Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210


>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
           repressor protein (SHARP) protein.
          Length = 3664

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
           +L + NL   TT  DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471


>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
           transcription cofactor protein.
          Length = 3664

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248
           +L + NL   TT  DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471


>BC012062-1|AAH12062.1|  407|Homo sapiens DAZ associated protein 1
           protein.
          Length = 407

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
           D +  L V  L + TT E LR  F + GEV D  I +D+T
Sbjct: 7   DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46


>AY678451-1|AAV97647.1|  454|Homo sapiens DAZAP1/MEF2D fusion
           protein protein.
          Length = 454

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
           D +  L V  L + TT E LR  F + GEV D  I +D+T
Sbjct: 7   DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46


>AY547318-1|AAS55633.1|  236|Homo sapiens unknown protein.
          Length = 236

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           V  L Y TT   LR+ FE  GE+ +  +  DR  GK
Sbjct: 15  VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50


>AL136305-1|CAC36889.1|  236|Homo sapiens protein ( Human DNA
           sequence from clone RP1-259A10 on chromosome 6p22.1-23
           Contains the gene for an ssDNA binding protein and a CpG
           island.  ).
          Length = 236

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           V  L Y TT   LR+ FE  GE+ +  +  DR  GK
Sbjct: 15  VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50


>AK095016-1|BAC04474.1|  211|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to
           Xenopus laevis RRM-containing protein SEB-4 mRNA. ).
          Length = 211

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           V  L Y TT   LR+ FE  GE+ +  +  DR  GK
Sbjct: 15  VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50


>AF181719-1|AAF78364.1|  407|Homo sapiens DAZ associated protein 1
           protein.
          Length = 407

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
           D +  L V  L + TT E LR  F + GEV D  I +D+T
Sbjct: 7   DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46


>BC013889-1|AAH13889.1|  759|Homo sapiens RNA binding motif protein
           28 protein.
          Length = 759

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
           D    L + NL+++ + +DL+ VF + G V ++ IPR +  GK+
Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKM 153


>AK222716-1|BAD96436.1|  759|Homo sapiens RNA binding motif protein
           28 variant protein.
          Length = 759

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
           D    L + NL+++ + +DL+ VF + G V ++ IPR +  GK+
Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKM 153


>AK001239-1|BAA91575.1|  759|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
           NUCLEOLAR PROTEIN NOP4. ).
          Length = 759

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269
           D    L + NL+++ + +DL+ VF + G V ++ IPR +  GK+
Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKM 153


>U38175-1|AAB41913.1|  326|Homo sapiens HuR RNA binding protein
           protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           +K+SY RP   +    +L +  L    T +D+  +F R G + +  +  D+T G
Sbjct: 91  IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144



 Score = 29.5 bits (63), Expect = 4.8
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +3

Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLK 314
           G  +L V+ L    T ++LR +F   GEV    + RD+  G    S   GF + VT K
Sbjct: 18  GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG---HSLGYGFVNYVTAK 72


>BT009793-1|AAP88795.1|  326|Homo sapiens ELAV (embryonic lethal,
           abnormal vision, Drosophila)-like 1 (Hu antigen R)
           protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           +K+SY RP   +    +L +  L    T +D+  +F R G + +  +  D+T G
Sbjct: 91  IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144



 Score = 29.5 bits (63), Expect = 4.8
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +3

Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLK 314
           G  +L V+ L    T ++LR +F   GEV    + RD+  G    S   GF + VT K
Sbjct: 18  GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG---HSLGYGFVNYVTAK 72


>BC130001-1|AAI30002.1|  255|Homo sapiens LOC390748 protein protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 117 GRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           G P  +++    S+ V N+ Y  + E+L   F RCGEV  + I  D+  G
Sbjct: 136 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSG 185


>BC003376-1|AAH03376.1|  326|Homo sapiens ELAV (embryonic lethal,
           abnormal vision, Drosophila)-like 1 (Hu antigen R)
           protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263
           +K+SY RP   +    +L +  L    T +D+  +F R G + +  +  D+T G
Sbjct: 91  IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144



 Score = 29.5 bits (63), Expect = 4.8
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +3

Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLK 314
           G  +L V+ L    T ++LR +F   GEV    + RD+  G    S   GF + VT K
Sbjct: 18  GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG---HSLGYGFVNYVTAK 72


>AC003982-3|AAB95636.1|  362|Homo sapiens WUGSC:H_166H1.2 protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           P  +     + V  L+  TT ED+++ FE+ G+V D  +  D+T  +
Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 148


>AB073212-1|BAB70469.1|  179|Homo sapiens Musashi1 protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           P  +     + V  L+  TT ED+++ FE+ G+V D  +  D+T  +
Sbjct: 36  PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 82


>AB072592-1|BAB69769.1|  181|Homo sapiens Musashi1 protein.
          Length = 181

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           P  +     + V  L+  TT ED+++ FE+ G+V D  +  D+T  +
Sbjct: 39  PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 85


>AB072591-1|BAB69768.1|  181|Homo sapiens Musashi1 protein.
          Length = 181

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           P  +     + V  L+  TT ED+++ FE+ G+V D  +  D+T  +
Sbjct: 39  PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 85


>AB072590-1|BAB69767.1|  180|Homo sapiens Musashi1 protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           P  +     + V  L+  TT ED+++ FE+ G+V D  +  D+T  +
Sbjct: 39  PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 85


>AB012851-1|BAA33962.1|  362|Homo sapiens Musashi protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266
           P  +     + V  L+  TT ED+++ FE+ G+V D  +  D+T  +
Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 148


>BC001526-1|AAH01526.1|  328|Homo sapiens musashi homolog 2
           (Drosophila) protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
           +  L+++T+P+ LR  F + GE+ +  + RD T
Sbjct: 25  IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPT 57


>AK093888-1|BAC04244.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
           Ribonucleoprotein. ).
          Length = 251

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257
           +  L+++T+P+ LR  F + GE+ +  + RD T
Sbjct: 21  IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPT 53


>AJ405692-1|CAC03805.1|   63|Homo sapiens T-cell receptor beta chain
           protein.
          Length = 63

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLGM 239
           S  R +G FS   +++  +G+S+ + C  SLG+
Sbjct: 23  SAERPKGSFSTLEIQRTEQGDSAMYLCASSLGL 55


>AF009786-1|AAB63916.1|  107|Homo sapiens T cell receptor beta chain
           protein.
          Length = 107

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLG 242
           S  R +G FS   +++  +G+S+ + C  SLG
Sbjct: 42  SAERAKGSFSTLEIQRTEQGDSAMYLCASSLG 73


>U63289-1|AAC50895.1|  482|Homo sapiens CUG-BP/hNab50 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 11  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53


>BC031079-1|AAH31079.1|  483|Homo sapiens CUG triplet repeat, RNA
           binding protein 1 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 11  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53


>AJ405859-1|CAC03972.1|   66|Homo sapiens T-cell receptor beta chain
           protein.
          Length = 66

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLGM 239
           S  R +G FS   +++  +G+S+ + C  SLG+
Sbjct: 27  SAERPKGSFSTLEIQRTEQGDSAMYLCASSLGV 59


>AJ405825-1|CAC03938.1|   65|Homo sapiens T-cell receptor beta chain
           protein.
          Length = 65

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLGM 239
           S  R +G FS   +++  +G+S+ + C  SLG+
Sbjct: 26  SAERPKGSFSTLEIQRTEQGDSAMYLCASSLGV 58


>AJ007988-1|CAC20566.1|  486|Homo sapiens deadenylation factor
           CUG-BP protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 11  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53


>AF267534-1|AAF78956.1|  483|Homo sapiens CUG-binding protein A
           isoform protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 11  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53


>AF267533-1|AAF78955.1|  486|Homo sapiens CUG-binding protein LYLQ
           isoform protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 11  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53


>AF248648-1|AAF86230.1|  486|Homo sapiens RNA-binding protein
           BRUNOL2 protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 11  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53


>AB210019-1|BAE06101.1|  544|Homo sapiens CUGBP1 variant protein
           protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260
           P +D  + + V  +    + +DLR +FE+ G V +I + RDR+Q
Sbjct: 70  PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,349,924
Number of Sequences: 237096
Number of extensions: 963982
Number of successful extensions: 2170
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 1982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2165
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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