BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0485 (419 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 90 2e-18 X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 90 2e-18 BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 90 2e-18 BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 90 2e-18 BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. 90 2e-18 BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 90 2e-18 BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 90 2e-18 AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 90 2e-18 AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens ... 90 2e-18 AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 90 2e-18 M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 87 2e-17 BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 85 9e-17 AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 85 9e-17 AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 69 6e-12 L03693-1|AAA60162.1| 34|Homo sapiens splicing factor protein. 64 1e-10 BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 40 0.003 AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein. 40 0.003 AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 40 0.003 U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 37 0.024 CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 37 0.024 BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 37 0.024 BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 37 0.024 BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 37 0.024 AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 37 0.024 AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 37 0.024 AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 37 0.024 CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 37 0.032 BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 37 0.032 AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 37 0.032 AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 37 0.032 AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 37 0.032 AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 37 0.032 AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 37 0.032 BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein. 36 0.073 BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 36 0.073 BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 36 0.073 BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 36 0.073 AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 36 0.073 AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 36 0.073 AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 36 0.073 AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 36 0.073 AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 36 0.073 AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 36 0.073 AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 36 0.073 AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 36 0.073 AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 36 0.073 AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 36 0.073 AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 36 0.073 AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 36 0.073 AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 36 0.073 AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 36 0.073 AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 36 0.073 AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 36 0.073 AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 36 0.073 AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 32 0.90 AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 32 0.90 AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 32 0.90 AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 32 0.90 AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 32 0.90 AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 32 0.90 BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 31 1.2 AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 31 1.2 AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 31 1.2 AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 31 1.2 AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 31 1.2 AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 31 1.2 BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 31 2.1 AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 31 2.1 AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 31 2.1 U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 30 2.7 BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 30 2.7 BC130001-1|AAI30002.1| 255|Homo sapiens LOC390748 protein protein. 30 2.7 BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 30 2.7 AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 30 2.7 AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 30 2.7 AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 30 2.7 AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 30 2.7 AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 30 2.7 AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 30 2.7 BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 30 3.6 AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 30 3.6 AJ405692-1|CAC03805.1| 63|Homo sapiens T-cell receptor beta ch... 29 6.3 AF009786-1|AAB63916.1| 107|Homo sapiens T cell receptor beta ch... 29 6.3 U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 29 8.4 BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 29 8.4 AJ405859-1|CAC03972.1| 66|Homo sapiens T-cell receptor beta ch... 29 8.4 AJ405825-1|CAC03938.1| 65|Homo sapiens T-cell receptor beta ch... 29 8.4 AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 29 8.4 AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 29 8.4 AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 29 8.4 AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 29 8.4 AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 29 8.4 >X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, arginine/serine-rich 2 protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, arginine/serine-rich 2 protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. Length = 179 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 >BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, arginine/serine-rich 2 variant protein. Length = 221 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens cDNA FLJ36307 fis, clone THYMU2004906, moderately similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ). Length = 186 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 >AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens cDNA FLJ35170 fis, clone PLACE6012942, highly similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ). Length = 201 Score = 90.2 bits (214), Expect = 2e-18 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. Length = 221 Score = 87.0 bits (206), Expect = 2e-17 Identities = 37/49 (75%), Positives = 43/49 (87%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 254 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ VGD+YIPRDR Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDR 49 Score = 33.5 bits (73), Expect = 0.29 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 320 LDTMDGRMLDGRELRXQMA 376 +D MDG +LDGRELR QMA Sbjct: 72 MDAMDGAVLDGRELRVQMA 90 >BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. Length = 275 Score = 85.0 bits (201), Expect = 9e-17 Identities = 35/48 (72%), Positives = 43/48 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 48 >AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor protein. Length = 282 Score = 85.0 bits (201), Expect = 9e-17 Identities = 35/48 (72%), Positives = 43/48 (89%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 48 >AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor protein. Length = 272 Score = 68.9 bits (161), Expect = 6e-12 Identities = 28/38 (73%), Positives = 35/38 (92%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ Sbjct: 1 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPRE 38 >L03693-1|AAA60162.1| 34|Homo sapiens splicing factor protein. Length = 34 Score = 64.5 bits (150), Expect = 1e-10 Identities = 27/34 (79%), Positives = 31/34 (91%) Frame = +3 Query: 108 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVF 209 MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVF Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVF 34 >BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor protein (35 kDa) protein. Length = 261 Score = 39.9 bits (89), Expect = 0.003 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL + N+ T PEDLRR F R G + D+YIP D Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44 >AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein. Length = 262 Score = 39.9 bits (89), Expect = 0.003 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL + N+ T PEDLRR F R G + D+YIP D Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44 >AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. Length = 261 Score = 39.9 bits (89), Expect = 0.003 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL + N+ T PEDLRR F R G + D+YIP D Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLD 44 >U96074-1|AAC78728.1| 320|Homo sapiens translation initiation factor eIF3 p44 subunit protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation initiation factor 3 subunit p42/p44 protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation initiation factor 3 subunit p42/p44 protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation initiation factor 3 subunit protein. Length = 320 Score = 37.1 bits (82), Expect = 0.024 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 120 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 +P R D +++V NL+ T DL+ +F G + IY+ +D+T G+ Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278 >CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. Length = 357 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 84 >BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. Length = 393 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120 >AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1 protein. Length = 248 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120 >AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1 protein. Length = 523 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120 >AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens cDNA FLJ10955 fis, clone PLACE1000406, moderately similar to PTB-ASSOCIATED SPLICING FACTOR. ). Length = 357 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 84 >AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta isoform protein. Length = 393 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120 >AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 alpha isoform protein. Length = 523 Score = 36.7 bits (81), Expect = 0.032 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 153 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 L V NL T ED +R+FER GE +++I RDR G Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG 120 >BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein. Length = 69 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. Length = 173 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2 protein. Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein 2 protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein 1 protein. Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 261 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 173 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 172 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein (serine/arginine-rich) 1 protein. Length = 182 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein (serine-arginine rich) 1 isoform 2 variant protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to Homo sapiens TLS-associated protein TASR-2 mRNA. ). Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein TASR-2 protein. Length = 261 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein TASR-1 protein. Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein TASR-2 protein. Length = 262 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein TASR protein. Length = 183 Score = 35.5 bits (78), Expect = 0.073 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 114 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 251 Y RPP SL V N+ T EDLRR F R G + D+Y+P D Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44 >AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated repressor protein (SHARP) protein. Length = 296 Score = 31.9 bits (69), Expect = 0.90 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248 +L + NL TT DLR +F+R GE+ DI I + Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210 >AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated repressor protein (SHARP) protein. Length = 3664 Score = 31.9 bits (69), Expect = 0.90 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248 +L + NL TT DLR +F+R GE+ DI I + Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471 >AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein protein. Length = 3261 Score = 31.9 bits (69), Expect = 0.90 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248 +L + NL TT DLR +F+R GE+ DI I + Sbjct: 36 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 68 >AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated repressor protein (SHARP) protein. Length = 296 Score = 31.9 bits (69), Expect = 0.90 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248 +L + NL TT DLR +F+R GE+ DI I + Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210 >AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated repressor protein (SHARP) protein. Length = 3664 Score = 31.9 bits (69), Expect = 0.90 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248 +L + NL TT DLR +F+R GE+ DI I + Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471 >AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transcription cofactor protein. Length = 3664 Score = 31.9 bits (69), Expect = 0.90 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 150 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 248 +L + NL TT DLR +F+R GE+ DI I + Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471 >BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1 protein. Length = 407 Score = 31.5 bits (68), Expect = 1.2 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257 D + L V L + TT E LR F + GEV D I +D+T Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46 >AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion protein protein. Length = 454 Score = 31.5 bits (68), Expect = 1.2 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257 D + L V L + TT E LR F + GEV D I +D+T Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46 >AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. Length = 236 Score = 31.5 bits (68), Expect = 1.2 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 V L Y TT LR+ FE GE+ + + DR GK Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50 >AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA sequence from clone RP1-259A10 on chromosome 6p22.1-23 Contains the gene for an ssDNA binding protein and a CpG island. ). Length = 236 Score = 31.5 bits (68), Expect = 1.2 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 V L Y TT LR+ FE GE+ + + DR GK Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50 >AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to Xenopus laevis RRM-containing protein SEB-4 mRNA. ). Length = 211 Score = 31.5 bits (68), Expect = 1.2 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 V L Y TT LR+ FE GE+ + + DR GK Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGK 50 >AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1 protein. Length = 407 Score = 31.5 bits (68), Expect = 1.2 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257 D + L V L + TT E LR F + GEV D I +D+T Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46 >BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein 28 protein. Length = 759 Score = 30.7 bits (66), Expect = 2.1 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269 D L + NL+++ + +DL+ VF + G V ++ IPR + GK+ Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKM 153 >AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein 28 variant protein. Length = 759 Score = 30.7 bits (66), Expect = 2.1 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269 D L + NL+++ + +DL+ VF + G V ++ IPR + GK+ Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKM 153 >AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to NUCLEOLAR PROTEIN NOP4. ). Length = 759 Score = 30.7 bits (66), Expect = 2.1 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +3 Query: 138 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKV 269 D L + NL+++ + +DL+ VF + G V ++ IPR + GK+ Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKM 153 >U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein protein. Length = 326 Score = 30.3 bits (65), Expect = 2.7 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +3 Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 +K+SY RP + +L + L T +D+ +F R G + + + D+T G Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144 Score = 29.5 bits (63), Expect = 4.8 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +3 Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLK 314 G +L V+ L T ++LR +F GEV + RD+ G S GF + VT K Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG---HSLGYGFVNYVTAK 72 >BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) protein. Length = 326 Score = 30.3 bits (65), Expect = 2.7 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +3 Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 +K+SY RP + +L + L T +D+ +F R G + + + D+T G Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144 Score = 29.5 bits (63), Expect = 4.8 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +3 Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLK 314 G +L V+ L T ++LR +F GEV + RD+ G S GF + VT K Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG---HSLGYGFVNYVTAK 72 >BC130001-1|AAI30002.1| 255|Homo sapiens LOC390748 protein protein. Length = 255 Score = 30.3 bits (65), Expect = 2.7 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 117 GRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 G P +++ S+ V N+ Y + E+L F RCGEV + I D+ G Sbjct: 136 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSG 185 >BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) protein. Length = 326 Score = 30.3 bits (65), Expect = 2.7 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +3 Query: 102 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQG 263 +K+SY RP + +L + L T +D+ +F R G + + + D+T G Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144 Score = 29.5 bits (63), Expect = 4.8 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +3 Query: 141 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGKVEDSPS*GFSSVVTLK 314 G +L V+ L T ++LR +F GEV + RD+ G S GF + VT K Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG---HSLGYGFVNYVTAK 72 >AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. Length = 362 Score = 30.3 bits (65), Expect = 2.7 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 P + + V L+ TT ED+++ FE+ G+V D + D+T + Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 148 >AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. Length = 179 Score = 30.3 bits (65), Expect = 2.7 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 P + + V L+ TT ED+++ FE+ G+V D + D+T + Sbjct: 36 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 82 >AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. Length = 181 Score = 30.3 bits (65), Expect = 2.7 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 P + + V L+ TT ED+++ FE+ G+V D + D+T + Sbjct: 39 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 85 >AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. Length = 181 Score = 30.3 bits (65), Expect = 2.7 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 P + + V L+ TT ED+++ FE+ G+V D + D+T + Sbjct: 39 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 85 >AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. Length = 180 Score = 30.3 bits (65), Expect = 2.7 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 P + + V L+ TT ED+++ FE+ G+V D + D+T + Sbjct: 39 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 85 >AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. Length = 362 Score = 30.3 bits (65), Expect = 2.7 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 126 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQGK 266 P + + V L+ TT ED+++ FE+ G+V D + D+T + Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 148 >BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Drosophila) protein. Length = 328 Score = 29.9 bits (64), Expect = 3.6 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +3 Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257 + L+++T+P+ LR F + GE+ + + RD T Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPT 57 >AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens cDNA FLJ36569 fis, clone TRACH2010824, highly similar to Ribonucleoprotein. ). Length = 251 Score = 29.9 bits (64), Expect = 3.6 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +3 Query: 159 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRT 257 + L+++T+P+ LR F + GE+ + + RD T Sbjct: 21 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPT 53 >AJ405692-1|CAC03805.1| 63|Homo sapiens T-cell receptor beta chain protein. Length = 63 Score = 29.1 bits (62), Expect = 6.3 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLGM 239 S R +G FS +++ +G+S+ + C SLG+ Sbjct: 23 SAERPKGSFSTLEIQRTEQGDSAMYLCASSLGL 55 >AF009786-1|AAB63916.1| 107|Homo sapiens T cell receptor beta chain protein. Length = 107 Score = 29.1 bits (62), Expect = 6.3 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = -2 Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLG 242 S R +G FS +++ +G+S+ + C SLG Sbjct: 42 SAERAKGSFSTLEIQRTEQGDSAMYLCASSLG 73 >U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. Length = 482 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 11 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53 >BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA binding protein 1 protein. Length = 483 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 11 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53 >AJ405859-1|CAC03972.1| 66|Homo sapiens T-cell receptor beta chain protein. Length = 66 Score = 28.7 bits (61), Expect = 8.4 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLGM 239 S R +G FS +++ +G+S+ + C SLG+ Sbjct: 27 SAERPKGSFSTLEIQRTEQGDSAMYLCASSLGV 59 >AJ405825-1|CAC03938.1| 65|Homo sapiens T-cell receptor beta chain protein. Length = 65 Score = 28.7 bits (61), Expect = 8.4 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 337 SVHRVQGFFSVTTLEKPXEGESSTFPCVRSLGM 239 S R +G FS +++ +G+S+ + C SLG+ Sbjct: 26 SAERPKGSFSTLEIQRTEQGDSAMYLCASSLGV 58 >AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CUG-BP protein. Length = 486 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 11 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53 >AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A isoform protein. Length = 483 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 11 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53 >AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ isoform protein. Length = 486 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 11 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53 >AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRUNOL2 protein. Length = 486 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 11 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 53 >AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein protein. Length = 544 Score = 28.7 bits (61), Expect = 8.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 129 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRTQ 260 P +D + + V + + +DLR +FE+ G V +I + RDR+Q Sbjct: 70 PDLDA-IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQ 112 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 52,349,924 Number of Sequences: 237096 Number of extensions: 963982 Number of successful extensions: 2170 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 1982 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2165 length of database: 76,859,062 effective HSP length: 83 effective length of database: 57,180,094 effective search space used: 3202085264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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