Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0483
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 199 1e-51
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 199 1e-51
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 199 1e-51
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 199 1e-51
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 199 1e-51
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 199 1e-51
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 195 2e-50
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 4e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 120 1e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 120 1e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 118 2e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 118 2e-27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 1e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 79 2e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.1
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.4
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.4
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 118 bits (285), Expect = 2e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 117 bits (281), Expect = 7e-27
Identities = 51/55 (92%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 72
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 73 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 106
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 222 MVGMGQKDSYV 254
MVGMGQKDSYV
Sbjct: 1 MVGMGQKDSYV 11
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 102
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 103 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 136
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 41
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 195 bits (476), Expect = 2e-50
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+N
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSN 115
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYV IQAV SLYASGRTT
Sbjct: 116 REKMTQIMFETFNTPAMYVNIQAVLSLYASGRTT 149
Score = 113 bits (272), Expect = 8e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (324), Expect = 4e-32
Identities = 57/94 (60%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 436
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
RE+ +I FE FN PA+Y+ +QAV SLYA+GRTT
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAVLSLYATGRTT 153
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFI 57
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 118 bits (285), Expect = 2e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 118 bits (285), Expect = 2e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDM 337
DEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 109 bits (261), Expect = 2e-24
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 394
R G + L+ +E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 395 PVLLTEAPLNPKANREKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
+LLTE PLNP +NREKM Q+MFE + ++YVA+QAV +LYA G T
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLT 153
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99 bits (238), Expect = 1e-21
Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 DEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 433
DEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 69 DEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPE 128
Query: 434 NREKMTQIMFEXFNTPAMYVAIQAVSSLYAS 526
NRE +IMFE FN P +Y+A+QAV +L AS
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/78 (44%), Positives = 51/78 (65%)
Frame = +2
Query: 302 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFEXFNTP 481
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 482 AMYVAIQAVSSLYASGRT 535
A Y++ V S +A GRT
Sbjct: 154 AYYLSKNVVLSCFAQGRT 171
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 254 RDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 433
++E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPA 105
Query: 434 NREKMTQIMFEXF 472
+ ++I+F+ F
Sbjct: 106 LPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 254 RDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 433
++E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPA 105
Query: 434 NREKMTQIMFEXF 472
+ ++I+F+ F
Sbjct: 106 LPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 351 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSLHKSPSVPYRPSRPDG 208
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 194 RGKAPPSGRDGRYGTEGLLCRDEAQSKRG 280
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQG 218
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRXIQ---HARHVRRHPSRVFAVR 522
AC GT SPA GSP PQ D + Q + VRRH F ++
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELK 1282
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRXIQ---HARHVRRHPSRVFAVR 522
AC GT SPA GSP PQ D + Q + VRRH F ++
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELK 1295
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRXIQ---HARHVRRHPSRVFAVR 522
AC GT SPA GSP PQ D + Q + VRRH F ++
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELK 1283
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRXIQ---HARHVRRHPSRVFAVR 522
AC GT SPA GSP PQ D + Q + VRRH F ++
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELK 1295
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 397
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 397
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +2
Query: 320 TNWD-DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA--NREKMTQIMFEXFNTPAMY 490
T WD D +++ F ++L APE+ ++L NP ++ +++ E ++
Sbjct: 152 TFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLF 211
Query: 491 VAIQAVSSLYASGRTTVSCW 550
+ASG W
Sbjct: 212 TFFDIAYQGFASGDPAADAW 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,923
Number of Sequences: 27780
Number of extensions: 327797
Number of successful extensions: 1316
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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