Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0483
(568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 198 3e-51
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 197 4e-51
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 197 4e-51
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 196 1e-50
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 195 1e-50
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 195 1e-50
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 195 1e-50
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 195 2e-50
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 195 2e-50
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 177 3e-45
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 167 5e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 164 4e-41
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 1e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 96 1e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 1e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 67 9e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 7e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 2e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.076
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 0.94
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 0.94
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 30 1.2
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 30 1.2
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 2.2
At4g30000.1 68417.m04268 dihydropterin pyrophosphokinase, putati... 28 3.8
At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05... 28 5.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.6
At1g69190.1 68414.m07919 dihydropterin pyrophosphokinase, putati... 27 6.6
At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 27 8.7
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 27 8.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 198 bits (482), Expect = 3e-51
Identities = 91/94 (96%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 4e-51
Identities = 91/94 (96%), Positives = 91/94 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 4e-51
Identities = 91/94 (96%), Positives = 91/94 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FNTPAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 196 bits (477), Expect = 1e-50
Identities = 90/94 (95%), Positives = 91/94 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FN PAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 195 bits (476), Expect = 1e-50
Identities = 88/94 (93%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FN+PAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 151
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 195 bits (476), Expect = 1e-50
Identities = 88/94 (93%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FN+PAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 151
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 195 bits (476), Expect = 1e-50
Identities = 88/94 (93%), Positives = 92/94 (97%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FN+PAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 151
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 195 bits (475), Expect = 2e-50
Identities = 89/94 (94%), Positives = 90/94 (95%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FN PAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 195 bits (475), Expect = 2e-50
Identities = 89/94 (94%), Positives = 90/94 (95%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE FN PAMYVAIQAV SLYASGRTT
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTT 151
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 177 bits (432), Expect = 3e-45
Identities = 77/94 (81%), Positives = 87/94 (92%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 437 REKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
REKMTQIMFE F P+MY+ IQAV SLY+SGRTT
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTT 152
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/52 (75%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++V
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFV 57
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 167 bits (406), Expect = 5e-42
Identities = 73/98 (74%), Positives = 87/98 (88%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
L D+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 425 PKANREKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
PKA+REKMTQIMFE F P+MY+ +QA SL+ASGRTT
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTT 106
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 164 bits (398), Expect = 4e-41
Identities = 77/107 (71%), Positives = 87/107 (81%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 397
RDG E + +E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 398 VLLTEAPLNPKANREKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
VLLTEAP NPKANREKMTQIMFE F+ PAMYV++Q+V LY+SGRTT
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTT 140
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYV
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYV 45
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (263), Expect = 1e-24
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +2
Query: 284 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 463
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 464 EXFNTPAMYVAIQAVSSLYASGRTT 538
E +N +++ IQAV +LYA G T
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLT 150
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYV-----EMRHR 269
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD V E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 96.3 bits (229), Expect = 1e-20
Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = +2
Query: 257 DEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 427
DEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P
Sbjct: 72 DEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Query: 428 KANREKMTQIMFEXFNTPAMYVAIQAVSSLYASGRTTVSC 547
+RE +I+FE FN P +Y+A+ +V +L A+G TT C
Sbjct: 132 PESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/89 (41%), Positives = 58/89 (65%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 451
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 452 QIMFEXFNTPAMYVAIQAVSSLYASGRTT 538
++MFE + PA+++A V + +A+GR T
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRAT 173
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 66.9 bits (156), Expect = 9e-12
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFEXFN 475
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFE FN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 476 TPAMYVAIQAVSSLYASGR 532
Y + QAV SLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 203
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 445
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.2 bits (132), Expect = 7e-09
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFEX 469
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 470 FNTPAMYVA-IQAVSSLYASGR 532
F ++Y+A Q++ LY + R
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASR 142
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFEXFN 475
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FE +
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 476 TPAMYVAIQAVSS 514
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.076
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 235 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 98
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 0.94
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 425 PKANREK 445
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 0.94
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 425 PKANREK 445
REK
Sbjct: 221 VFRPREK 227
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Frame = +2
Query: 356 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFEXF---NTPAMYVAIQA 505
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 506 VSSLYASGRTT 538
V +LYA+ RT+
Sbjct: 241 VLALYAARRTS 251
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Frame = +2
Query: 356 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFEXF---NTPAMYVAIQA 505
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 506 VSSLYASGRTT 538
V +LYA+ RT+
Sbjct: 241 VLALYAARRTS 251
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 188 LDRGKAPPSGRDGR--YGTEGLLCRDEAQSKRGILTLK 295
L+RG+ S R GR +G G RD+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
>At4g30000.1 68417.m04268 dihydropterin pyrophosphokinase, putative
/ dihydropteroate synthase, putative / DHPS, putative
similar to dihydropterin pyrophosphokinase
/dihydropteroate synthase [Pisum sativum]
gi|1934972|emb|CAA69903
Length = 554
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 552 FQHDTVVRPDAYSEDTAWMATYMAGVLNXSNMIWV 448
F D RP+A D A +A+ AG+L +N+I V
Sbjct: 496 FLGDICGRPEATDRDAATVASVTAGILGGANIIRV 530
>At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1097
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 415 SPQPQGQQREDDPDHVRXIQHARHVRRHPSRVF--AVRVRSYHGIV 546
SP P + ++ P+ Q + + R+P+R+F A ++ + G +
Sbjct: 377 SPSPMSKGEQNSPNSKMGYQKLKKIARYPARIFLCAYMIKQHPGAI 422
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 345 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 256
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 211 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 89
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g69190.1 68414.m07919 dihydropterin pyrophosphokinase, putative
/ dihydropteroate synthase, putative / DHPS, putative
similar to dihydropterin pyrophosphokinase
/dihydropteroate synthase [Pisum sativum]
gi|1934972|emb|CAA69903
Length = 459
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 552 FQHDTVVRPDAYSEDTAWMATYMAGVLNXSNMIWV 448
F D RP+A D A +A AG+L +N+I V
Sbjct: 400 FLGDICGRPEASERDAATVACVTAGILKGANIIRV 434
>At4g00700.1 68417.m00096 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1006
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 EGLLCRDEAQSKRGILTLKYPIE-HGIVTNWDDMEKIWHHTFY 364
+GLL RD+ S + LK+ + T +D +WH FY
Sbjct: 14 QGLLQRDKHNSCSPFVELKFDNQIFRATTKHNDPNPVWHECFY 56
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 567 DTVAGFQHDTVVRPDAYSEDTAWMAT 490
D + F+H +VR A+S+DT ++ T
Sbjct: 94 DVLHSFEHKHIVRACAFSQDTKYLIT 119
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,709,892
Number of Sequences: 28952
Number of extensions: 313890
Number of successful extensions: 916
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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