Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0482
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060975-1|AAL28523.1|  442|Drosophila melanogaster GM10508p pro...   117   1e-26
AE013599-3955|AAF47271.1|  464|Drosophila melanogaster CG16912-P...   117   1e-26
AY113395-1|AAM29400.1|  339|Drosophila melanogaster RE07958p pro...    42   6e-04
AY075475-1|AAL68287.1|  416|Drosophila melanogaster RE35481p pro...    31   2.0  
AE014297-3770|AAN14045.2|  416|Drosophila melanogaster CG31102-P...    31   2.0  

>AY060975-1|AAL28523.1|  442|Drosophila melanogaster GM10508p
           protein.
          Length = 442

 Score =  117 bits (282), Expect = 1e-26
 Identities = 59/150 (39%), Positives = 89/150 (59%)
 Frame = -2

Query: 705 PLVTTDEGDKFGKSAGKCIVVGFSKNKSI*FVSIFHSNQRC*CRATVEAIYFLQLRRDQR 526
           PLVTT+EGDKFGKSAG  + +  +K         F           ++   F+ L + ++
Sbjct: 239 PLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQ 298

Query: 525 YHV*T*QHPDQRYPQQCLAEQLTTLVHGKDGLAQAQRATSAIYSKDIKSLVSLKSDELEK 346
                 + P++R  Q  LAE +T LVHG+ GL QA+R T+A+Y  +++ L  L   E+++
Sbjct: 299 LMREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQ 358

Query: 345 VFEGAPVTSLLLSPGITVLELGMKAKCFPT 256
            F+GA + +LL  PG+++LEL MKAKCFPT
Sbjct: 359 TFQGATMVNLLTEPGMSILELAMKAKCFPT 388



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = -1

Query: 262 PDWNDAMRIIEAGGFYINHQKIKKIDEVITQSAHILPNLISLLRTGKRNYYIVKWQ 95
           P   DA+RII AGGFY+N ++++ I EV+T   HIL N ISLLR GKRN+YIV+WQ
Sbjct: 387 PTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHILRNGISLLRVGKRNFYIVRWQ 442


>AE013599-3955|AAF47271.1|  464|Drosophila melanogaster CG16912-PA
           protein.
          Length = 464

 Score =  117 bits (282), Expect = 1e-26
 Identities = 59/150 (39%), Positives = 89/150 (59%)
 Frame = -2

Query: 705 PLVTTDEGDKFGKSAGKCIVVGFSKNKSI*FVSIFHSNQRC*CRATVEAIYFLQLRRDQR 526
           PLVTT+EGDKFGKSAG  + +  +K         F           ++   F+ L + ++
Sbjct: 261 PLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQ 320

Query: 525 YHV*T*QHPDQRYPQQCLAEQLTTLVHGKDGLAQAQRATSAIYSKDIKSLVSLKSDELEK 346
                 + P++R  Q  LAE +T LVHG+ GL QA+R T+A+Y  +++ L  L   E+++
Sbjct: 321 LMREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQ 380

Query: 345 VFEGAPVTSLLLSPGITVLELGMKAKCFPT 256
            F+GA + +LL  PG+++LEL MKAKCFPT
Sbjct: 381 TFQGATMVNLLTEPGMSILELAMKAKCFPT 410



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = -1

Query: 262 PDWNDAMRIIEAGGFYINHQKIKKIDEVITQSAHILPNLISLLRTGKRNYYIVKWQ 95
           P   DA+RII AGGFY+N ++++ I EV+T   HIL N ISLLR GKRN+YIV+WQ
Sbjct: 409 PTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHILRNGISLLRVGKRNFYIVRWQ 464


>AY113395-1|AAM29400.1|  339|Drosophila melanogaster RE07958p
           protein.
          Length = 339

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = -2

Query: 705 PLVTTDEGDKFGKSAGKCIVVGFSKNKSI*FVSIFHSNQRC*CRATVEAIY 553
           PLVTT+EGDKFGKSAG  + +  +K         F ++ R   R   EA++
Sbjct: 261 PLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFPAHARLRGRKAPEAVH 311


>AY075475-1|AAL68287.1|  416|Drosophila melanogaster RE35481p
           protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 365 FNETNDLISLL*IADVALCAWANPSFPCTRVVSCSARH 478
           + +T D I+ +   D  LC W +P+     ++ CSARH
Sbjct: 269 YTQTGD-INQVRFVDFQLCKWGSPAQDLWELIICSARH 305


>AE014297-3770|AAN14045.2|  416|Drosophila melanogaster CG31102-PA
           protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 365 FNETNDLISLL*IADVALCAWANPSFPCTRVVSCSARH 478
           + +T D I+ +   D  LC W +P+     ++ CSARH
Sbjct: 269 YTQTGD-INQVRFVDFQLCKWGSPAQDLWELIICSARH 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,539,295
Number of Sequences: 53049
Number of extensions: 589592
Number of successful extensions: 1253
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)