Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0481
(747 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.64
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 6.0
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 6.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.9
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.64
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T TS+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSST 176
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 136 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.6
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.6
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.6
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 79
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 80 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 132
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.6
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 494
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.5
Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPA-PSTLCTSR---TPTGHTFAT 656
S+ T S + G +P + P P+T S+ +P T +T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 130 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 130 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 716 RQGDPPHH 739
RQG PPHH
Sbjct: 57 RQGIPPHH 64
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,469
Number of Sequences: 336
Number of extensions: 4542
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -