Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0481
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 156 2e-38
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 155 4e-38
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 155 4e-38
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 32 0.42
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.97
11_06_0087 - 19919224-19922304 29 3.0
04_03_1015 - 21734381-21736534 29 3.0
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.9
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 5.2
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 5.2
02_05_0202 + 26708049-26709074 28 6.9
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.9
08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128 28 9.1
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 28 9.1
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 156 bits (379), Expect = 2e-38
Identities = 78/162 (48%), Positives = 98/162 (60%)
Frame = +3
Query: 255 MDXVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MD +SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPST 614
IRYPDPLIK ND+I++D+ T KI+D G V G
Sbjct: 147 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFE 206
Query: 615 LCTSRTPTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 740
GH FATRL NVF IGKG K ++SLP+GKGI+L+I
Sbjct: 207 TIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSI 248
Score = 141 bits (342), Expect = 5e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 65.7 bits (153), Expect = 4e-11
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2
Query: 509 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSNG 640
FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ G
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALG 215
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 155 bits (376), Expect = 4e-38
Identities = 79/162 (48%), Positives = 98/162 (60%)
Frame = +3
Query: 255 MDXVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MD VSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRT
Sbjct: 103 MDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRT 162
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPST 614
IRYPDPLIK ND+I++D+ T KI+D G V G
Sbjct: 163 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFE 222
Query: 615 LCTSRTPTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 740
GH FATR+ NVF IGK K ++SLP+GKGI+L+I
Sbjct: 223 TIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSI 264
Score = 141 bits (341), Expect = 6e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAG 101
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +2
Query: 509 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSNG 640
FIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H++D+ G
Sbjct: 188 FIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALG 231
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 155 bits (376), Expect = 4e-38
Identities = 77/162 (47%), Positives = 98/162 (60%)
Frame = +3
Query: 255 MDXVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MD +SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPST 614
IRYPDP+IK ND+I++D+ T KI+D G V G
Sbjct: 147 IRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFE 206
Query: 615 LCTSRTPTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 740
GH FATRL NVF IGKG K ++SLP+GKGI+L+I
Sbjct: 207 TIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSI 248
Score = 141 bits (342), Expect = 5e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 65.7 bits (153), Expect = 4e-11
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2
Query: 509 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSNG 640
FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ G
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALG 215
>01_01_0025 +
188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 719 AARQRDVRLRALA-DYEHVVQPRGEGVSRWSP*CAQC--RRSRDVSRGTRWCPRAPSYGL 549
AA+Q + R L+ + +PRGEG + P +Q RR R+V+R TR C R + L
Sbjct: 27 AAKQSKWKQRRLSKEMLEFSEPRGEGRKKGIPEMSQTARRRKREVARSTRHCLRLAVFRL 86
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 142 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 504
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 355 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 480
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 155 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 27
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 1
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 39 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 203
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>02_05_0202 + 26708049-26709074
Length = 341
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 619 HNVEGAGMSLAGHDGAHAPQVTASRDHTQVPG 524
+ V +G +L GH +H A+ H Q PG
Sbjct: 268 YRVFASGQALGGHKKSHVCSAAAAAAHAQTPG 299
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 291 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 395
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128
Length = 1226
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 679 IMNTLFNLVAKVCPVGVLDVHNVEG 605
I+ T F LVA+ C +++HN+EG
Sbjct: 580 ILTTRFKLVAQHCSKKEMNMHNIEG 604
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 506 GFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 625
GF+K E G + + GG GR+G + R + D++ +
Sbjct: 119 GFVKREDGPVLDVVGGGGGGRIGLNLGRRTYFSPADVLAV 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,710,606
Number of Sequences: 37544
Number of extensions: 560881
Number of successful extensions: 1909
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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