BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0479 (877 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 27 0.75 AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.99 AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450 pr... 25 4.0 AF487780-1|AAL96667.1| 490|Anopheles gambiae cytochrome P450 CY... 25 4.0 AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 24 5.3 AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 23 9.2 AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 9.2 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 27.1 bits (57), Expect = 0.75 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 592 GIRRQLGVHMEPSIKGDCTEVVWTHGYSSLHGPATPPKTLSLR 720 G+R GV EP KGD E+ G L G + PP + L+ Sbjct: 233 GVRGPQGVKGEPGEKGDRGEI----GVKGLMGQSGPPGMIGLK 271 >AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase protein. Length = 1173 Score = 26.6 bits (56), Expect = 0.99 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +2 Query: 668 DTVLCTGLPPHRKHYRFGCP 727 D + CTG+P +H F CP Sbjct: 964 DCIRCTGVPETAEHAMFECP 983 >AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450 protein. Length = 492 Score = 24.6 bits (51), Expect = 4.0 Identities = 10/39 (25%), Positives = 22/39 (56%) Frame = -1 Query: 460 AANIYFPFGENLTNETGGLSSSIRVLRHCPEAVSQIRHK 344 AAN++ + T +S ++ L H PEA+++++ + Sbjct: 290 AANVFLFYIAGAETSTATISFTLHELSHNPEAMAKLQQE 328 >AF487780-1|AAL96667.1| 490|Anopheles gambiae cytochrome P450 CYP6Z2 protein protein. Length = 490 Score = 24.6 bits (51), Expect = 4.0 Identities = 10/39 (25%), Positives = 22/39 (56%) Frame = -1 Query: 460 AANIYFPFGENLTNETGGLSSSIRVLRHCPEAVSQIRHK 344 AAN++ + T +S ++ L H PEA+++++ + Sbjct: 290 AANVFLFYIAGAETSTATISFTLHELSHNPEAMAKLQQE 328 >AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase protein. Length = 1222 Score = 24.2 bits (50), Expect = 5.3 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 303 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 413 NRD ++ + D + ++TAS QC+ T ++D P Sbjct: 564 NRDKRCLLVVALD-VRNAFNTASWQCIATALEDKGVP 599 >AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. Length = 165 Score = 23.4 bits (48), Expect = 9.2 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 295 TAETGSECAGNGFSISLFSHPISEHS 218 TA TGS +G+ S SL+ EH+ Sbjct: 42 TASTGSASSGHSGSSSLYDRVPREHA 67 >AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium channel alpha subunitprotein. Length = 2139 Score = 23.4 bits (48), Expect = 9.2 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +3 Query: 792 RQRFCARLHIESWKR 836 R+ +CARL +WKR Sbjct: 1990 REEYCARLIQHAWKR 2004 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 992,680 Number of Sequences: 2352 Number of extensions: 21747 Number of successful extensions: 50 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 50 length of database: 563,979 effective HSP length: 64 effective length of database: 413,451 effective search space used: 93853377 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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