Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0479
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.75 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    27   0.99 
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    25   4.0  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    25   4.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.3  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   9.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.75
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 592 GIRRQLGVHMEPSIKGDCTEVVWTHGYSSLHGPATPPKTLSLR 720
           G+R   GV  EP  KGD  E+    G   L G + PP  + L+
Sbjct: 233 GVRGPQGVKGEPGEKGDRGEI----GVKGLMGQSGPPGMIGLK 271


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 668  DTVLCTGLPPHRKHYRFGCP 727
            D + CTG+P   +H  F CP
Sbjct: 964  DCIRCTGVPETAEHAMFECP 983


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -1

Query: 460 AANIYFPFGENLTNETGGLSSSIRVLRHCPEAVSQIRHK 344
           AAN++  +       T  +S ++  L H PEA+++++ +
Sbjct: 290 AANVFLFYIAGAETSTATISFTLHELSHNPEAMAKLQQE 328


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -1

Query: 460 AANIYFPFGENLTNETGGLSSSIRVLRHCPEAVSQIRHK 344
           AAN++  +       T  +S ++  L H PEA+++++ +
Sbjct: 290 AANVFLFYIAGAETSTATISFTLHELSHNPEAMAKLQQE 328


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 303 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 413
           NRD   ++  + D +   ++TAS QC+ T ++D   P
Sbjct: 564 NRDKRCLLVVALD-VRNAFNTASWQCIATALEDKGVP 599


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 295 TAETGSECAGNGFSISLFSHPISEHS 218
           TA TGS  +G+  S SL+     EH+
Sbjct: 42  TASTGSASSGHSGSSSLYDRVPREHA 67


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 792  RQRFCARLHIESWKR 836
            R+ +CARL   +WKR
Sbjct: 1990 REEYCARLIQHAWKR 2004


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 992,680
Number of Sequences: 2352
Number of extensions: 21747
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)