Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0479
(877 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 165 3e-41
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 145 4e-35
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 83 2e-16
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 81 7e-16
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 76 3e-14
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 74 1e-13
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 73 3e-13
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 72 4e-13
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 72 4e-13
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 71 8e-13
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 71 8e-13
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 71 1e-12
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 71 1e-12
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 71 1e-12
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 71 1e-12
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 70 2e-12
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 70 2e-12
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 70 2e-12
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 70 2e-12
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 68 1e-11
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 68 1e-11
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 67 1e-11
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 67 1e-11
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 67 2e-11
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 67 2e-11
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 66 2e-11
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 66 2e-11
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 66 2e-11
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 66 4e-11
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 66 4e-11
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 66 4e-11
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 66 4e-11
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 65 5e-11
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 65 7e-11
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 65 7e-11
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 65 7e-11
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 64 9e-11
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 64 9e-11
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 64 9e-11
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 64 1e-10
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 64 1e-10
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 64 2e-10
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 64 2e-10
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 64 2e-10
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 63 2e-10
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 63 3e-10
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 62 4e-10
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 62 5e-10
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 62 6e-10
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 62 6e-10
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 62 6e-10
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 62 6e-10
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 61 8e-10
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 61 8e-10
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 61 8e-10
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 61 1e-09
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 60 1e-09
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 60 1e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 60 2e-09
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 58 6e-09
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 58 6e-09
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 58 6e-09
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 58 1e-08
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 58 1e-08
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 57 1e-08
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 57 1e-08
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 57 2e-08
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 57 2e-08
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 57 2e-08
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 57 2e-08
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 57 2e-08
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 56 2e-08
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 56 3e-08
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 55 7e-08
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 55 7e-08
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 55 7e-08
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 54 2e-07
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 54 2e-07
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 54 2e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 53 2e-07
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 53 2e-07
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 53 3e-07
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 52 4e-07
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 52 7e-07
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 51 9e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 51 9e-07
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 51 9e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 51 9e-07
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 51 9e-07
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 51 9e-07
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 51 9e-07
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 51 1e-06
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 51 1e-06
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 51 1e-06
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 51 1e-06
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 50 2e-06
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 50 2e-06
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 50 2e-06
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 50 2e-06
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 50 2e-06
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 50 2e-06
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 50 2e-06
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 50 2e-06
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 50 2e-06
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 50 3e-06
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 50 3e-06
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 50 3e-06
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 50 3e-06
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 49 4e-06
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 49 5e-06
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 48 6e-06
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 48 6e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 48 6e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 48 6e-06
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 48 8e-06
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 47 1e-05
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 47 1e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 2e-05
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 47 2e-05
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 46 3e-05
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 46 3e-05
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 46 3e-05
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 46 3e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 46 3e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 46 3e-05
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 46 3e-05
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 46 3e-05
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 46 4e-05
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 46 4e-05
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 46 4e-05
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 46 4e-05
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 46 4e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 45 6e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 45 6e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 45 6e-05
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 45 6e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 45 8e-05
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 45 8e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 45 8e-05
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 44 1e-04
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 44 1e-04
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 44 1e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 44 1e-04
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 44 1e-04
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 44 1e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 44 1e-04
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 44 1e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 44 1e-04
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 44 2e-04
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 44 2e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 44 2e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 44 2e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 44 2e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 44 2e-04
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 44 2e-04
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 44 2e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 2e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 43 2e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 43 3e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 43 3e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 43 3e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 42 4e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 42 5e-04
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 42 5e-04
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 42 5e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 42 5e-04
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 42 5e-04
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 42 7e-04
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 42 7e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 42 7e-04
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 42 7e-04
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 41 0.001
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 41 0.001
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 40 0.002
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 40 0.002
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 40 0.002
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 40 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 40 0.003
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 40 0.003
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 40 0.003
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 39 0.004
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 39 0.004
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 39 0.005
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 39 0.005
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 39 0.005
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.007
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 38 0.009
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 38 0.009
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 38 0.009
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 38 0.012
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 38 0.012
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 38 0.012
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 37 0.015
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 37 0.015
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 37 0.020
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 37 0.020
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 37 0.020
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 37 0.020
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 36 0.027
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 36 0.027
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 36 0.036
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 36 0.036
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 36 0.036
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 36 0.036
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 36 0.036
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 36 0.047
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.082
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 35 0.082
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.11
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 34 0.14
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 33 0.19
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.19
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 33 0.25
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 33 0.25
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 33 0.25
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 33 0.25
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 33 0.25
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 33 0.33
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 33 0.33
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 33 0.33
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 33 0.33
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.33
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 33 0.33
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 32 0.44
At5g54730.1 68418.m06815 expressed protein 32 0.58
At5g05150.1 68418.m00547 transport protein-related contains 2 WD... 32 0.58
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 32 0.58
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 32 0.58
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 32 0.58
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 31 1.0
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 31 1.0
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 1.3
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 31 1.3
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 30 1.8
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.8
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 30 1.8
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 30 1.8
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 30 1.8
At4g33400.1 68417.m04747 dem protein-related / defective embryo ... 30 2.3
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 3.1
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 3.1
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 29 4.1
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 29 4.1
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 4.1
At1g49610.1 68414.m05562 F-box family protein contains F-box dom... 29 4.1
At1g24320.1 68414.m03068 alpha-glucosidase, putative similar to ... 29 4.1
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 29 5.4
At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate transloca... 28 7.1
At2g35605.1 68415.m04363 SWIB complex BAF60b domain-containing p... 28 7.1
At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A... 28 7.1
At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A... 28 7.1
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 28 7.1
At1g03380.1 68414.m00317 expressed protein 28 7.1
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 165 bits (401), Expect = 3e-41
Identities = 86/168 (51%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
LK LPAHSDPV+AV FNRDGSLIVSSSYDGLCRIWD+ +G C+KTLIDD+NPPVSFV+FS
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFS 207
Query: 435 PNGKYILAATLDNTLKLWDYSRGKC*R-HIRDTRTKNIVSLPTLVSLAGSG*YRDQKTTW 611
PNGK+IL TLDNTL+LW+ S K + + + +S V+ G +
Sbjct: 208 PNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT-NGKRIVSGSEDNC 266
Query: 612 CTYGTFNQRRLYRGCLDTRIQFSARACHPTENIIASAALENDKTIQLW 755
N ++L + ACHPTEN+IAS +L DKT+++W
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSL--DKTVRIW 312
Score = 136 bits (330), Expect = 1e-32
Identities = 59/80 (73%), Positives = 71/80 (88%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 195
+GH+ GISDVA+SSD+R IVSASDDKTLK+W++ +G +KTL GH+NY FC NFNPQSN+
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127
Query: 196 IVSGSFDESVRIWDVRTGKC 255
IVSGSFDE+VRIWDV TGKC
Sbjct: 128 IVSGSFDETVRIWDVTTGKC 147
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +2
Query: 443 KIYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 622
K + G + ++ + K LKTYTGH N +YCI + FSVT GK IVSGSEDN V++W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 623 NLQSKEIVQRLSGHTDTVLCTGLPP 697
L SK+++Q+L GHT+TV+ P
Sbjct: 271 ELNSKKLLQKLEGHTETVMNVACHP 295
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/83 (44%), Positives = 53/83 (63%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
KT+ GH V ++ S +IVS S D+T+++W++++GKCLK L HS+ V +FN
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 187 SNLIVSGSFDESVRIWDVRTGKC 255
+LIVS S+D RIWD TG C
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTGHC 189
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/96 (34%), Positives = 55/96 (57%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E ++K L H++ V+FN ++IVS S+D RIWD +G+CLK L + PV+
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL-PAHSDPVT 159
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIRD 527
V F+ +G I++++ D ++WD G C + + D
Sbjct: 160 AVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID 195
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E ++ H + +S V F+ D IVS+S D ++WD +G +KTLI N V
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VN 120
Query: 429 FSPNGKYILAATLDNTLKLWDYSRGKC 509
F+P I++ + D T+++WD + GKC
Sbjct: 121 FNPQSNMIVSGSFDETVRIWDVTTGKC 147
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +1
Query: 1 FEKTISGH---KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 171
F KT +GH + IS ++ + IVS S+D + +WEL+S K L+ L+GH+ V
Sbjct: 232 FLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNV 291
Query: 172 NFNPQSNLIVSGSFDESVRIW 234
+P NLI SGS D++VRIW
Sbjct: 292 ACHPTENLIASGSLDKTVRIW 312
Score = 61.7 bits (143), Expect = 6e-10
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-----GKCLKTLKGHSNYVFCC 171
+T++ H +S V +SSD RL+ SAS DKT++ + +++ + ++ GH N +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 172 NFNPQSNLIVSGSFDESVRIWDVRTG 249
F+ + IVS S D+++++WDV TG
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETG 103
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN-YVFCCNFNP 183
K + H ++ V ++ D LIVS+S D ++W+ +G C+KTL N V F+P
Sbjct: 149 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 184 QSNLIVSGSFDESVRIWDVRTGK 252
I+ G+ D ++R+W++ + K
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAK 231
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FN-PQSNLIVS 204
+S V +S + + I+ + D TL++W +SS K LKT GH N +C + F+ IVS
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 205 GSFDESVRIWDVRTGK 252
GS D V +W++ + K
Sbjct: 261 GSEDNCVHMWELNSKK 276
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
++KT GH N +C+ NF+ IVSGS D V IW++ + + ++ L H+D V
Sbjct: 105 LIKTLIGHTNYAFCV--NFNPQSNM-IVSGSFDETVRIWDVTTGKCLKVLPAHSDPV 158
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/63 (28%), Positives = 37/63 (58%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTG 688
++ +TGH+N + FS + ++IVS S+D + +W++++ +++ L GHT+ C
Sbjct: 64 VQEFTGHENGISDVA--FS-SDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
Query: 689 LPP 697
P
Sbjct: 121 FNP 123
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
F FS GK+I+ G+ DN + +WN+ S + ++ +GH + C
Sbjct: 203 FVRFS-PNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 245
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 145 bits (351), Expect = 4e-35
Identities = 81/172 (47%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
++ + AHS P+S+VHFNRDGSLIVS+S+DG C+IWD G CLKTLIDD +P VSF KFS
Sbjct: 163 VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFS 222
Query: 435 PNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSLPTLVSLAGSG*YRDQKTTWC 614
PNGK+IL ATLD+TLKL +Y+ GK + + T + + + S+ C
Sbjct: 223 PNGKFILVATLDSTLKLSNYATGKFLK-VYTGHTNKVFCITSAFSVTNGKYIVSGSEDNC 281
Query: 615 TYGTFNQRR--LYR--GCLDTRIQFSARACHPTENIIASAALENDKTIQLWK 758
Y Q R L R G D I S CHP +N I+S+ DKTI++WK
Sbjct: 282 VYLWDLQARNILQRLEGHTDAVISVS---CHPVQNEISSSGNHLDKTIRIWK 330
Score = 125 bits (302), Expect = 3e-29
Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQSNL 195
GH GISD+AWSSDS SASDD TL++W+ S +CLK L+GH+N+VFC NFNP SNL
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL 142
Query: 196 IVSGSFDESVRIWDVRTGKC 255
IVSGSFDE++RIW+V+TGKC
Sbjct: 143 IVSGSFDETIRIWEVKTGKC 162
Score = 77.8 bits (183), Expect = 9e-15
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K + GH + V ++ S LIVS S D+T+++WE+ +GKC++ +K HS + +FN
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 187 SNLIVSGSFDESVRIWDVRTGKC 255
+LIVS S D S +IWD + G C
Sbjct: 182 GSLIVSASHDGSCKIWDAKEGTC 204
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/96 (36%), Positives = 59/96 (61%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E LK L H++ V V+FN +LIVS S+D RIW+ +G+C++ +I + P+S V
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVR-MIKAHSMPISSVH 177
Query: 429 FSPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRT 536
F+ +G I++A+ D + K+WD G C + + D ++
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNP 183
+ I H M IS V ++ D LIVSAS D + K+W+ G CLKTL S V F+P
Sbjct: 164 RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP 223
Query: 184 QSNLIVSGSFDESVRIWDVRTGK 252
I+ + D ++++ + TGK
Sbjct: 224 NGKFILVATLDSTLKLSNYATGK 246
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
KT+ GH IS V +S+D L+ SAS DKT+ +W ++ + +GHS+ + ++
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 187 SNLIVSGSFDESVRIWDVRT 246
S+ S S D ++RIWD R+
Sbjct: 97 SHYTCSASDDCTLRIWDARS 116
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVS 419
N ++ HS +S + ++ D S+S D RIWD S +CLK L N V
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTN-FVF 132
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIR 524
V F+P I++ + D T+++W+ GKC R I+
Sbjct: 133 CVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK 167
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +1
Query: 7 KTISGHKM-GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--F 177
KT+ K +S +S + + I+ A+ D TLK+ ++GK LK GH+N VFC F
Sbjct: 206 KTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAF 265
Query: 178 N-PQSNLIVSGSFDESVRIWDVR 243
+ IVSGS D V +WD++
Sbjct: 266 SVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
LK L H+ +S V F+ DG+L+ S+S D +W +A+ L + + +S + +S
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW-SATNYSLIHRYEGHSSGISDLAWS 94
Query: 435 PNGKYILAATLDNTLKLWD 491
+ Y +A+ D TL++WD
Sbjct: 95 SDSHYTCSASDDCTLRIWD 113
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Frame = +1
Query: 1 FEKTISGH--KMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 171
F K +GH K+ A+S ++ + IVS S+D + +W+L + L+ L+GH++ V
Sbjct: 247 FLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISV 306
Query: 172 NFNPQSNLIVSGS--FDESVRIW 234
+ +P N I S D+++RIW
Sbjct: 307 SCHPVQNEISSSGNHLDKTIRIW 329
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
LKTL+GH+ + C F+ NL+ S S D+++ +W
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW 70
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 667
LK GH N +C+ NF+ IVSGS D + IW +++ + V+ + H+
Sbjct: 121 LKVLRGHTNFVFCV--NFNPPSNL-IVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
LKT GH C+ FS G + S S D + +W+ + ++ R GH+ +
Sbjct: 36 LKTLEGHTAAISCV--KFS-NDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 590 SGSEDNLVYIWNLQSK-EIVQRLSGHTDTVLCTGLPP 697
S S+D + IW+ +S E ++ L GHT+ V C P
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP 138
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 83.0 bits (196), Expect = 2e-16
Identities = 33/77 (42%), Positives = 53/77 (68%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH I V + ++ IVSASDD+T+++W S C+ L GH++YV C +F+P+
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 190 NLIVSGSFDESVRIWDV 240
+L+VS S D++VR+WD+
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQ 186
+ GH G++ ++ LIVS +DD+ +K+W ++ K + TL+GH N V F+ +
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 187 SNLIVSGSFDESVRIWDV--RTG 249
++IVS S D+S+R+WD RTG
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTG 282
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H+ + V + + L VS DD +KVW + +CL TL GH +Y+ F+ ++ IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 202 SGSFDESVRIWDVRTGKC 255
S S D+++RIW+ ++ C
Sbjct: 110 SASDDQTIRIWNWQSRTC 127
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H D + V F+ + IVS+S D RIW+ S C+ +++ N V F P
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI-SVLTGHNHYVMCASFHPKE 147
Query: 444 KYILAATLDNTLKLWD 491
+++A+LD T+++WD
Sbjct: 148 DLVVSASLDQTVRVWD 163
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H PV VHF+ L VS D ++W+ + +CL TL+ + + V+F +I
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLD-YIRTVQFHHENPWI 108
Query: 453 LAATLDNTLKLWDYSRGKC 509
++A+ D T+++W++ C
Sbjct: 109 VSASDDQTIRIWNWQSRTC 127
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 581 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
WIVS S+D + IWN QS+ + L+GH V+C P
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH +S V + + +IVS S+DK+++VW+ + ++T + + + +P+
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 190 NLIVSG 207
NL+ +G
Sbjct: 303 NLLAAG 308
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
I+++ +++W+ G + H V +F+ L VSG D +++W+ +T
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTH 83
Query: 250 KC 255
+C
Sbjct: 84 RC 85
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
L+GH V +F+P LIVSG+ D V++W + K
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETK 237
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 389
L H + VS+V F+ +IVS+S D R+WD ++T
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 126
++GH + ++ L+VSAS D+T++VW++ + K
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALK 168
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 81.4 bits (192), Expect = 7e-16
Identities = 33/77 (42%), Positives = 52/77 (67%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH I V + + IVSASDD+T+++W S C+ L GH++YV C +F+P+
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 190 NLIVSGSFDESVRIWDV 240
+L+VS S D++VR+WD+
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQ 186
+ GH G++ A+ LIVS +DD+ +K+W ++ K + TL+GH N V F+ +
Sbjct: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 187 SNLIVSGSFDESVRIWDV--RTG 249
++IVS S D+S+R+WD RTG
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTG 282
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H+ + V + + L VS DD +KVW + +CL TL GH +Y+ F+ + IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 202 SGSFDESVRIWDVRTGKC 255
S S D+++RIW+ ++ C
Sbjct: 110 SASDDQTIRIWNWQSRTC 127
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N L L H D + V F+ + IVS+S D RIW+ S C+ +++ N V
Sbjct: 81 KNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCV-SVLTGHNHYVM 139
Query: 420 FVKFSPNGKYILAATLDNTLKLWD 491
F P +++A+LD T+++WD
Sbjct: 140 CASFHPKEDLVVSASLDQTVRVWD 163
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H PV VHF+ L VS D ++W+ + +CL TL+ + + V+F +I
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLD-YIRTVQFHHEYPWI 108
Query: 453 LAATLDNTLKLWDYSRGKC 509
++A+ D T+++W++ C
Sbjct: 109 VSASDDQTIRIWNWQSRTC 127
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH +S V + + +IVS S+DK+++VW+ + L+T + + + +P+
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 190 NLIVSG 207
NL+ +G
Sbjct: 303 NLLAAG 308
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 581 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
WIVS S+D + IWN QS+ V L+GH V+C P
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHP 145
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
I+++ +++W+ G + H V +F+ L VSG D +++W+ +
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNH 83
Query: 250 KC 255
+C
Sbjct: 84 RC 85
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 389
L H + VS+V F+ +IVS+S D R+WD L+T
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQT 285
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
L+GH V F+P LIVSG+ D V++W + K
Sbjct: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 120
++GH + ++ L+VSAS D+T++VW++ +
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 76.2 bits (179), Expect = 3e-14
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQS 189
+ GHK I D+ W+SD IVSAS DKT++ W++ +GK +K + HS++V CC
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 190 NLIVSGSFDESVRIWDVR 243
LI+SGS D + ++WD+R
Sbjct: 152 PLIISGSDDGTAKLWDMR 169
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQS 189
+SGH + + ++ LI S S D+ + +W + K LKGH N + ++
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 190 NLIVSGSFDESVRIWDVRTGK 252
+ IVS S D++VR WDV TGK
Sbjct: 109 SQIVSASPDKTVRAWDVETGK 129
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/73 (27%), Positives = 40/73 (54%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 204
K I+ V++S + I + D +KVW+L G+ TL+GH + + + +P + +++
Sbjct: 180 KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 205 GSFDESVRIWDVR 243
D + +WD+R
Sbjct: 240 NGMDNKLCVWDMR 252
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +3
Query: 237 CENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
C+N +LK H + + +H+ DGS IVS+S D R WD +G+ +K + + +
Sbjct: 86 CKNFMVLK---GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Query: 417 SFVKFSPNGKYILAATLDNTLKLWD 491
S I++ + D T KLWD
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAKLWD 167
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
E + +K + HS V++ R G LI+S S DG ++WD ++T D +
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF--PDKYQI 183
Query: 417 SFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
+ V FS I +DN +K+WD +G+
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGE 213
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL----SSGKCLKTLKGHS-NY---VF 165
T+ GH+ I+ ++ S D +++ D L VW++ +C+K +GH N+ +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 166 CCNFNPQSNLIVSGSFDESVRIWD 237
C+++P + +GS D V IWD
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 44.8 bits (101), Expect = 8e-05
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
+WS D + + S D+ + +W+ +S + + L GH+ V C F+P +I S S D+++
Sbjct: 279 SWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Query: 226 RIWDV 240
+ ++
Sbjct: 339 YLGEI 343
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
LI+S SDD T K+W++ ++T + +F+ ++ I +G D V++WD+R
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 247 GK 252
G+
Sbjct: 212 GE 213
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +2
Query: 497 QRKMLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTD 670
Q + +K + GH++ EK + ++S G K + +GS D +V+IW+ S+ + +L GHT
Sbjct: 257 QNRCVKIFEGHQHNFEKNLLKCSWSPDGTK-VTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Query: 671 TV 676
+V
Sbjct: 316 SV 317
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
++AV F+ I + D ++WD G+ TL + ++ + SP+G Y+L
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTITGMSLSPDGSYLLTNG 241
Query: 465 LDNTLKLWD 491
+DN L +WD
Sbjct: 242 MDNKLCVWD 250
Score = 37.5 bits (83), Expect = 0.012
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 446 IYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIW 622
+ I G ++ + QR ++T+ +KY I A +FS K I +G DN V +W
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFP----DKYQITAVSFSDAADK-IFTGGVDNDVKVW 207
Query: 623 NLQSKEIVQRLSGHTDTVLCTGLPP 697
+L+ E L GH DT+ L P
Sbjct: 208 DLRKGEATMTLEGHQDTITGMSLSP 232
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD----TASGQCLKTLI-DDDNPP 413
E L H D ++ + + DGS ++++ D +WD +C+K N
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFE 272
Query: 414 VSFVK--FSPNGKYILAATLDNTLKLWD 491
+ +K +SP+G + A + D + +WD
Sbjct: 273 KNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
GHKN I + G IVS S D V W++++ + +++++ H+ V
Sbjct: 94 GHKN---AILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFV 141
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH + D++WS L+ S+S DKT+++W+LSS CLK HS+YV C FNP N
Sbjct: 466 GHLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNY 523
Query: 196 IVSGSFDESVRIWDV 240
+SGS D VRIW +
Sbjct: 524 FISGSLDAKVRIWSI 538
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 449
H D V + +++ L+ SSS D R+WD +S CLK D V+ ++F+P + Y
Sbjct: 467 HLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVFSHSDY--VTCIQFNPVDDNY 523
Query: 450 ILAATLDNTLKLW 488
++ +LD +++W
Sbjct: 524 FISGSLDAKVRIW 536
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 634
++ + G +N I A+ + + GK++VS SED+ VY+WN S
Sbjct: 634 LVHKFKGFRNTNSQISASLT-SNGKFLVSASEDSNVYVWNYDS 675
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
I HK I + +S D R + SA +D +++W++
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 201 IRQFR*ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 380
+RQ+ C ++ + + + AH + ++ F+ DG + S+ D + +IW +
Sbjct: 340 VRQYGKSCKELTALFKS--QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESER 397
Query: 381 LKTLIDDD 404
L+ D
Sbjct: 398 KGELLSMD 405
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GHK I V +S+ + +++AS DKT+K+W +S G CLKT +GH++ V +F
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
VS D +++W+V T +C
Sbjct: 596 TQFVSCGADGLLKLWNVNTSEC 617
Score = 61.3 bits (142), Expect = 8e-10
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+ TI G ++ +A S D +L+ SA + ++VW+L + KC+++ KGH V +
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC*NHYR 270
L+ + D V +WDV G C +++R
Sbjct: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFR 141
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
++ H I+ VA + + L+ + S+D+T +W L + TLKGH +F F+
Sbjct: 495 VAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQ 554
Query: 193 LIVSGSFDESVRIWDVRTGKC 255
+++ S D++V+IW + G C
Sbjct: 555 CVMTASGDKTVKIWAISDGSC 575
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS--N 192
GH+ + +A + L+ +A D+ + VW++ G C +GH V F+P S N
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKN 159
Query: 193 LIVSGSFDESVRIWDV 240
+++SGS D +VR+WD+
Sbjct: 160 ILISGSDDATVRVWDL 175
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 ISGHK---MGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
++GHK + + SS + LIV+ S DKT+++W +S C+ GH+ + F
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAK 456
Query: 184 QS-NLIVSGSFDESVRIWDV 240
+S + VSGS D ++++W +
Sbjct: 457 KSFSFFVSGSGDRTLKVWSL 476
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSS----GKCLKTLKGHSNYVFCCNFN 180
GHK +S + + DS +++S SDD T++VW+L++ KCL ++ H + V +
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS 201
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC 255
+ S D+ V +WD+ C
Sbjct: 202 EDGLTLFSAGRDKVVNLWDLHDYSC 226
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
KT GH + ++ +D VS D LK+W +++ +C+ T H + V+ +
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 187 SNLIVSGSFDESVRIW 234
+ +I +G D + +W
Sbjct: 637 TEMIATGGGDAVINLW 652
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H + +V F+ ++++S D +IW + G CLKT + V F +G
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKT-FEGHTSSVLRASFITDG 595
Query: 444 KYILAATLDNTLKLWDYSRGKC 509
++ D LKLW+ + +C
Sbjct: 596 TQFVSCGADGLLKLWNVNTSEC 617
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC---CN 174
K + G+ I+D+ + D + + A++ + ++V+++++ C L GH V C
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCV 411
Query: 175 FNPQSNLIVSGSFDESVRIWDVRTGKC 255
+ + LIV+GS D++VR+W+ + C
Sbjct: 412 SSSGNVLIVTGSKDKTVRLWNATSKSC 438
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/87 (22%), Positives = 41/87 (47%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ SD ++A+ + D L+ S+ + R+WD + +C+++ + PV + +G
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEG-PVMGMACHASG 114
Query: 444 KYILAATLDNTLKLWDYSRGKC*RHIR 524
+ A D + +WD G C + R
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFR 141
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
AH +++V R+ SL+ + S D IW + TL + V+FS +
Sbjct: 497 AHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTL-KGHKRRIFSVEFSTVDQC 555
Query: 450 ILAATLDNTLKLWDYSRGKC 509
++ A+ D T+K+W S G C
Sbjct: 556 VMTASGDKTVKIWAISDGSC 575
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
LK H+ V F DG+ VS DGL ++W+ + +C+ T D V +
Sbjct: 576 LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIAT-YDQHEDKVWALAVG 634
Query: 435 PNGKYILAATLDNTLKLW 488
+ I D + LW
Sbjct: 635 KKTEMIATGGGDAVINLW 652
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
GHK + S +G IV+GS+D V +WN SK + +GH +L
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDIL 450
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E + ++ H PV + + G L+ ++ D +WD G C VS
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTH-YFRGHKGVVS 148
Query: 420 FVKFSP--NGKYILAATLDNTLKLWD 491
+ F P N +++ + D T+++WD
Sbjct: 149 SILFHPDSNKNILISGSDDATVRVWD 174
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
LKT+ GH + + A+F +T G VS D L+ +WN+ + E + H D V
Sbjct: 576 LKTFEGHTSS--VLRASF-ITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKV 628
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
DGS I + D + + T S +K+ I+ ++ ++ + SP+ K + +A +++W
Sbjct: 30 DGSFIACACGDVINIVDSTDSS--VKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVW 87
Query: 489 DYSRGKC*R 515
D KC R
Sbjct: 88 DLETLKCIR 96
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 318 LIVSSSYDGLCRIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
LIV+ S D R+W+ S C+ T + D V+F K S + ++ + D TLK+W
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS--FSFFVSGSGDRTLKVW 474
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 515 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
T GHK + + FS T + +++ S D V IW + ++ GHT +VL
Sbjct: 536 TLKGHKRRIFSV--EFS-TVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVL 587
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 228 DMGCENREM--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
D+ +N E L + H V+++ + DG + S+ D + +WD C T+
Sbjct: 174 DLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATV 230
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 180
F GH + V+WS+DSRL++S S D TLK+WE+ + K + L GH++ VF +++
Sbjct: 394 FVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWS 453
Query: 181 PQSNLIVSGSFDESVRIW 234
P +VSG D +++W
Sbjct: 454 PDGEKVVSGGKDRVLKLW 471
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/83 (33%), Positives = 55/83 (66%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+K ++GH+ ++ V +S D + I SAS DK++++W +G+ + +GH V+ +++
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 184 QSNLIVSGSFDESVRIWDVRTGK 252
S L++SGS D +++IW++RT K
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKK 435
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+TI+GH + V++S D + + S S D T+++W+L + L T KGH N+V ++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 187 SNLIVSGSFDESVRIWDVRTGK 252
+VSGS + W+ + G+
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGE 184
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
+++ K L H V+ V+F+ DG I S+S+D R+W+ +GQ + T+ PV
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFV-TVFRGHVGPVYQ 407
Query: 423 VKFSPNGKYILAATLDNTLKLWD 491
V +S + + +L+ + D+TLK+W+
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWE 430
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/72 (31%), Positives = 44/72 (61%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+SGH + ++ V W D +I + S D T+K+WE + GK ++ LKGH +++ + +
Sbjct: 237 LSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-Y 294
Query: 193 LIVSGSFDESVR 228
++ +G+FD + R
Sbjct: 295 VLRTGAFDHTGR 306
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 IVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
+VS SDD T+ +WE S S + K L GH V F+P I S SFD+SVR+W+ T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 247 GK 252
G+
Sbjct: 392 GQ 393
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAW-----SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
++GHK I+ ++W SS R V++S D ++W+++ K + L GH+ V C +
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 178 NPQSNLIVSGSFDESVRIWDVRTGK 252
+I +GS D ++++W+ GK
Sbjct: 250 G-GDGIIYTGSQDCTIKMWETTQGK 273
Score = 46.4 bits (105), Expect = 3e-05
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 124 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
+C +T+ GH+ V C +F+P + SGS D +VR+WD+ T
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT 140
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H PV V ++ D L++S S D +IW+ + + LK + V V +SP+G+ +
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK-LKQDLPGHADEVFAVDWSPDGEKV 459
Query: 453 LAATLDNTLKLW 488
++ D LKLW
Sbjct: 460 VSGGKDRVLKLW 471
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ H++ V V F+ DG + S S D R+WD + L T N V V +SP+G
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN-WVLTVAWSPDG 163
Query: 444 KYILAATLDNTLKLWDYSRGK 506
K++++ + + W+ +G+
Sbjct: 164 KHLVSGSKSGEICCWNPKKGE 184
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+VS S D +W+ + + K + V+ V FSP+GK+I +A+ D +++LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 501 GK 506
G+
Sbjct: 392 GQ 393
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
+T GH C+ +FS GK + SGS D V +W+L ++ + GH + VL
Sbjct: 103 QTIAGHAEAVLCV--SFS-PDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 692 PPHRKH 709
P KH
Sbjct: 160 SPDGKH 165
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +3
Query: 294 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 473
VH + V+SS DG RIWD + + + V+ VK+ +G I + D
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSI-ICLSGHTLAVTCVKWGGDG-IIYTGSQDC 262
Query: 474 TLKLWDYSRGKC*RHIR 524
T+K+W+ ++GK R ++
Sbjct: 263 TIKMWETTQGKLIRELK 279
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
++SGS+D+ + IW +++K++ Q L GH D V P
Sbjct: 417 LLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSP 454
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 359
+++ + LP H+D V AV ++ DG +VS D + ++W
Sbjct: 434 KKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
++ + GH + V WS D +VS D+ LK+W+
Sbjct: 437 KQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
K TGH+ ++ FS GKWI S S D V +WN + + V GH V
Sbjct: 354 KRLTGHQQLVNHVY--FS-PDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPV 405
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 587 VSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
V+ S+D IW++ K+ + LSGHT V C
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTC 246
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQ-SKEIVQRLSGHTDTV 676
+VSGS+D +++W SK+ +RL+GH V
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLV 363
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 186
+ GH + D+AWS L+ S+S DKT+++W LSS CLK HS+YV C FNP
Sbjct: 508 SFQGHVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVD 565
Query: 187 SNLIVSGSFDESVRIWDV 240
+SGS D VR+W +
Sbjct: 566 DRYFISGSLDAKVRVWSI 583
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 449
H D V + +++ L+ SSS D R+W+ +S CLK D V+ ++F+P + +Y
Sbjct: 512 HVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVFSHSDY--VTCIQFNPVDDRY 568
Query: 450 ILAATLDNTLKLW 488
++ +LD +++W
Sbjct: 569 FISGSLDAKVRVW 581
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPH 700
G +N I A+ + G K++VS SED+ VYIW +S S + V T H
Sbjct: 685 GFRNTSSQISASITADG-KYVVSASEDSHVYIWKYESPASRPSRSNNNKNVTVTNSYEH 742
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 71.3 bits (167), Expect = 8e-13
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GH G++ + ++ D R IVS +D +KVW+L++GK L K H + +F+P
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 290
Query: 190 NLIVSGSFDESVRIWDVRT 246
L+ +GS D++V+ WD+ T
Sbjct: 291 FLLATGSADKTVKFWDLET 309
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH GI V + + L+ + + T+K+W+L K ++TL GH + NF+P
Sbjct: 147 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 206
Query: 190 NLIVSGSFDESVRIWDVRTGKC*NHYR 270
SGS D +++IWD+R C + Y+
Sbjct: 207 EFFASGSLDTNLKIWDIRKKGCIHTYK 233
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T++GH+ V + S S D LK+W++ C+ T KGH+ V F P
Sbjct: 188 RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 247
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHYR 270
IVSG D V++WD+ GK + ++
Sbjct: 248 GRWIVSGGEDNVVKVWDLTAGKLLHEFK 275
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E ++++ L H +V+F+ G S S D +IWD C+ T V+
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 240
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGK 506
++F+P+G++I++ DN +K+WD + GK
Sbjct: 241 VLRFTPDGRWIVSGGEDNVVKVWDLTAGK 269
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L HS + +V F+ L+ + + G ++WD + ++TL + VS V F P G
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVS-VNFHPFG 206
Query: 444 KYILAATLDNTLKLWDYSRGKC*RHIR-DTRTKNIVSLPTLVSLAGSG*YRDQKTTW-CT 617
++ + +LD LK+WD + C + TR N++ SG + W T
Sbjct: 207 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 266
Query: 618 YG-TFNQRRLYRGCLDTRIQFSARACHPTENIIASAALENDKTIQLW 755
G ++ + + G + + + F HP E ++A+ + DKT++ W
Sbjct: 267 AGKLLHEFKSHEGKIQS-LDF-----HPHEFLLATGSA--DKTVKFW 305
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = +2
Query: 443 KIYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 622
+ + G + + +I + ++ + TY GH + F+ G+WIVSG EDN+V +W
Sbjct: 207 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFT-PDGRWIVSGGEDNVVKVW 263
Query: 623 NLQSKEIVQRLSGHTDTVLCTGLPPH 700
+L + +++ H + PH
Sbjct: 264 DLTAGKLLHEFKSHEGKIQSLDFHPH 289
Score = 44.0 bits (99), Expect = 1e-04
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +1
Query: 61 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
SR++V+ +D + +W + + +L GHS+ + F+ L+ +G+ ++++WD+
Sbjct: 122 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDL 181
Query: 241 RTGK 252
K
Sbjct: 182 EEAK 185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+ V+ + F DG IVS D + ++WD +G+ L + + + F P+ +
Sbjct: 235 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-KIQSLDFHPHEFLL 293
Query: 453 LAATLDNTLKLWD 491
+ D T+K WD
Sbjct: 294 ATGSADKTVKFWD 306
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +2
Query: 479 QIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 658
++ L + K+++T TGH++ C+ NF G ++ SGS D + IW+++ K +
Sbjct: 177 KLWDLEEAKVVRTLTGHRSN--CVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYK 233
Query: 659 GHT 667
GHT
Sbjct: 234 GHT 236
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H+ I + + L+ + S DKT+K W+L + + + + + V C FNP ++
Sbjct: 277 HEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
Query: 202 SGSFDESVRIWDVRTGKC 255
G ES++I+ +C
Sbjct: 337 CG-LQESLKIFSWEPIRC 353
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
AHS V+ + R S ++V+ D +W + +L + + V F +
Sbjct: 107 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASEG 165
Query: 447 YILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
+ A T+KLWD K R + R+ N VS+
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRS-NCVSV 200
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/46 (19%), Positives = 23/46 (50%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFG 721
+ +G+ + +W+L+ ++V+ L+GH + P + + G
Sbjct: 167 VAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASG 212
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 186
++ GH I D++WS S+L++S+S DKT+++W++ + CLK L H++YV C F+P
Sbjct: 501 SLKGHLDAILDLSWSK-SQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVD 558
Query: 187 SNLIVSGSFDESVRIWDVR 243
N +SGS D +RIW ++
Sbjct: 559 ENYFLSGSLDAKIRIWSIQ 577
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-N 440
L H D + + +++ L++SSS D R+WD + CLK +D V+ ++FSP +
Sbjct: 502 LKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIETKTCLKLFAHNDY--VTCIQFSPVD 558
Query: 441 GKYILAATLDNTLKLW 488
Y L+ +LD +++W
Sbjct: 559 ENYFLSGSLDAKIRIW 574
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 109 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 243
ELS+ + ++ H V+ F+ ++ + SG D + +W+V+
Sbjct: 390 ELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQ 434
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 622
+++ + G +N + A++S GK+I+ SED+ VY+W
Sbjct: 671 EVIHKFKGFRNTCSQLSASYS-QDGKYIICASEDSQVYLW 709
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 527 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 649
H + CI FS + +SGS D + IW++Q + +V+
Sbjct: 545 HNDYVTCI--QFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 186
+ +GH + D++WS S+L++S+S DKT+++W++ + CLK L H++YV C FNP
Sbjct: 514 SFTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLD 571
Query: 187 SNLIVSGSFDESVRIWDV 240
+ +SGS D +RIW++
Sbjct: 572 EDYFISGSLDAKIRIWNI 589
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 449
H D V + ++R L++SSS D R+WD + CLK +D V+ V+F+P + Y
Sbjct: 518 HLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLFAHNDY--VTCVQFNPLDEDY 574
Query: 450 ILAATLDNTLKLWDYS 497
++ +LD +++W+ S
Sbjct: 575 FISGSLDAKIRIWNIS 590
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
++++ + G KN + A+++V K IV SED+ VY+W + + ++G +C
Sbjct: 683 ELVQKFRGFKNMNSQMTASYTVDA-KHIVCASEDSQVYVWKHEEPRL--GITGRKTVTMC 739
Query: 683 T 685
T
Sbjct: 740 T 740
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +1
Query: 109 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 243
+LS+ + ++ H ++ F+P S+L+ S D ++ +W+V+
Sbjct: 397 DLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ 441
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 542 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 649
Y F+ + +SGS D + IWN+ ++++V+
Sbjct: 561 YVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVE 596
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 70.5 bits (165), Expect = 1e-12
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GH G++ + ++ D R +VS +D +KVW+L++GK L K H + +F+P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 190 NLIVSGSFDESVRIWDVRT 246
L+ +GS D +V+ WD+ T
Sbjct: 198 FLLATGSADRTVKFWDLET 216
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH GI V + + L+ + + T+K+W+L K ++TL GH + +F+P
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 190 NLIVSGSFDESVRIWDVRTGKC*NHYR 270
SGS D +++IWD+R C + Y+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYK 140
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T++GH+ V + S S D LK+W++ C+ T KGH+ V F P
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 154
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQ 291
+VSG D V++WD+ GK ++ + Q Q
Sbjct: 155 GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQ 189
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E ++++ L H +V F+ G S S D +IWD C+ T V+
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGK 506
++F+P+G+++++ DN +K+WD + GK
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L HS + +V F+ L+ + + G ++WD + ++TL + +S V F P G
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFG 113
Query: 444 KYILAATLDNTLKLWDYSRGKC*RHIR-DTRTKNIVSLPTLVSLAGSG*YRDQKTTWCTY 620
++ + +LD LK+WD + C + TR N++ SG + W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW--- 170
Query: 621 GTFNQRRLYRGCLDTRIQFSARACHPTENIIASAALENDKTIQLW 755
+L Q + HP E ++A+ + D+T++ W
Sbjct: 171 -DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA--DRTVKFW 212
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/86 (24%), Positives = 42/86 (48%)
Frame = +2
Query: 443 KIYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 622
+ + G + + +I + ++ + TY GH + F+ G+W+VSG EDN+V +W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFT-PDGRWVVSGGEDNIVKVW 170
Query: 623 NLQSKEIVQRLSGHTDTVLCTGLPPH 700
+L + +++ H + PH
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPH 196
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+ V+ + F DG +VS D + ++WD +G+ L T + + F P+ +
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEFKSHEGQIQSLDFHPHEFLL 200
Query: 453 LAATLDNTLKLWD 491
+ D T+K WD
Sbjct: 201 ATGSADRTVKFWD 213
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +1
Query: 61 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
SR++V+ +D + +W + + +L GHS+ + F+ L+ +G+ ++++WD+
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 241 RTGK 252
K
Sbjct: 89 EEAK 92
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +2
Query: 479 QIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 658
++ L + K+++T TGH++ CI +F G ++ SGS D + IW+++ K +
Sbjct: 84 KLWDLEEAKIVRTLTGHRSN--CISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYK 140
Query: 659 GHT 667
GHT
Sbjct: 141 GHT 143
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H+ I + + L+ + S D+T+K W+L + + + + + V C +FNP ++
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 202 SGSFDESVRIWDVRTGKC 255
G ES++I+ +C
Sbjct: 244 CG-LQESLKIFSWEPIRC 260
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ AHS V+ + R S ++V+ D +W + +L + + V F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTF 67
Query: 432 SPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
+ + A T+KLWD K R + R+ N +S+
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS-NCISV 107
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFG 721
+ +G+ + +W+L+ +IV+ L+GH + P + + G
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG 119
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 70.5 bits (165), Expect = 1e-12
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GH G++ + ++ D R +VS +D +KVW+L++GK L K H + +F+P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 190 NLIVSGSFDESVRIWDVRT 246
L+ +GS D +V+ WD+ T
Sbjct: 198 FLLATGSADRTVKFWDLET 216
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH GI V + + L+ + + T+K+W+L K ++TL GH + +F+P
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 190 NLIVSGSFDESVRIWDVRTGKC*NHYR 270
SGS D +++IWD+R C + Y+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYK 140
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T++GH+ V + S S D LK+W++ C+ T KGH+ V F P
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 154
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQ 291
+VSG D V++WD+ GK ++ + Q Q
Sbjct: 155 GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQ 189
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E ++++ L H +V F+ G S S D +IWD C+ T V+
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGK 506
++F+P+G+++++ DN +K+WD + GK
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L HS + +V F+ L+ + + G ++WD + ++TL + +S V F P G
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFG 113
Query: 444 KYILAATLDNTLKLWDYSRGKC*RHIR-DTRTKNIVSLPTLVSLAGSG*YRDQKTTWCTY 620
++ + +LD LK+WD + C + TR N++ SG + W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW--- 170
Query: 621 GTFNQRRLYRGCLDTRIQFSARACHPTENIIASAALENDKTIQLW 755
+L Q + HP E ++A+ + D+T++ W
Sbjct: 171 -DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA--DRTVKFW 212
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/86 (24%), Positives = 42/86 (48%)
Frame = +2
Query: 443 KIYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 622
+ + G + + +I + ++ + TY GH + F+ G+W+VSG EDN+V +W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFT-PDGRWVVSGGEDNIVKVW 170
Query: 623 NLQSKEIVQRLSGHTDTVLCTGLPPH 700
+L + +++ H + PH
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPH 196
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+ V+ + F DG +VS D + ++WD +G+ L T + + F P+ +
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEFKSHEGQIQSLDFHPHEFLL 200
Query: 453 LAATLDNTLKLWD 491
+ D T+K WD
Sbjct: 201 ATGSADRTVKFWD 213
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +1
Query: 61 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
SR++V+ +D + +W + + +L GHS+ + F+ L+ +G+ ++++WD+
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 241 RTGK 252
K
Sbjct: 89 EEAK 92
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +2
Query: 479 QIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 658
++ L + K+++T TGH++ CI +F G ++ SGS D + IW+++ K +
Sbjct: 84 KLWDLEEAKIVRTLTGHRSN--CISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYK 140
Query: 659 GHT 667
GHT
Sbjct: 141 GHT 143
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H+ I + + L+ + S D+T+K W+L + + + + + V C +FNP ++
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 202 SGSFDESVRIWDVRTGKC 255
G ES++I+ +C
Sbjct: 244 CG-LQESLKIFSWEPIRC 260
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ AHS V+ + R S ++V+ D +W + +L + + V F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTF 67
Query: 432 SPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
+ + A T+KLWD K R + R+ N +S+
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS-NCISV 107
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFG 721
+ +G+ + +W+L+ +IV+ L+GH + P + + G
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG 119
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T GH GIS + +S D R +VS D +KVW+L++GK L K H + +F+P
Sbjct: 85 QTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL 144
Query: 187 SNLIVSGSFDESVRIWDVRT 246
L+ +GS D +V+ WD+ T
Sbjct: 145 EFLLATGSADRTVKFWDLET 164
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E +M++ H SAV F+ G + S S D R+WDT C++T +S
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTY-KGHTRGIS 95
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGK 506
++FSP+G+++++ LDN +K+WD + GK
Sbjct: 96 TIEFSPDGRWVVSGGLDNVVKVWDLTAGK 124
Score = 65.7 bits (153), Expect = 4e-11
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+ +GH+ S V + + S S D L+VW+ C++T KGH+ + F+P
Sbjct: 43 RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHYR 270
+VSG D V++WD+ GK + ++
Sbjct: 103 GRWVVSGGLDNVVKVWDLTAGKLLHEFK 130
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/87 (27%), Positives = 46/87 (52%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH + VA++S+ L+++ + +K+W+L K ++ GH + F+P
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 190 NLIVSGSFDESVRIWDVRTGKC*NHYR 270
+ SGS D ++R+WD R C Y+
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTYK 88
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/82 (25%), Positives = 44/82 (53%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H+ PV +V FN + L+++ + G+ ++WD + ++ + S V+F P G
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSN-CSAVEFHPFG 61
Query: 444 KYILAATLDNTLKLWDYSRGKC 509
+++ + + D L++WD + C
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGC 83
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+ +S + F+ DG +VS D + ++WD +G+ L + P + + F P +
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP-IRSLDFHPLEFLL 148
Query: 453 LAATLDNTLKLWD 491
+ D T+K WD
Sbjct: 149 ATGSADRTVKFWD 161
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 479 QIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 658
++ L + KM++ +TGH++ C F G +++ SGS D + +W+ + K +Q
Sbjct: 32 KLWDLEESKMVRAFTGHRSN--CSAVEFHPFG-EFLASGSSDTNLRVWDTRKKGCIQTYK 88
Query: 659 GHT 667
GHT
Sbjct: 89 GHT 91
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
++TY GH I FS G+W+VSG DN+V +W+L + +++ H
Sbjct: 84 IQTYKGHTRGISTI--EFS-PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
L+ + S D+T+K W+L + + + T + + V F+P + G D+ ++++
Sbjct: 147 LLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCG-LDDGLKVY 201
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T GH GIS + ++ D R +VS D +KVW+L++GK L K H + +F+P
Sbjct: 136 QTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPL 195
Query: 187 SNLIVSGSFDESVRIWDVRT 246
L+ +GS D +V+ WD+ T
Sbjct: 196 EFLLATGSADRTVKFWDLET 215
Score = 68.5 bits (160), Expect = 5e-12
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+ +GH+ S V + + S S D LK+W++ C++T KGHS + F P
Sbjct: 94 RAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPD 153
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHYR 270
+VSG D V++WD+ GK + ++
Sbjct: 154 GRWVVSGGLDNVVKVWDLTAGKLLHEFK 181
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/89 (31%), Positives = 50/89 (56%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E +M++ H SAV F+ G + S S D +IWD C++T + +S
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTY-KGHSRGIS 146
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGK 506
++F+P+G+++++ LDN +K+WD + GK
Sbjct: 147 TIRFTPDGRWVVSGGLDNVVKVWDLTAGK 175
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/87 (26%), Positives = 45/87 (51%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH + VA+ S L+++ + +K+W++ K ++ GH + F+P
Sbjct: 53 SLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 190 NLIVSGSFDESVRIWDVRTGKC*NHYR 270
+ SGS D +++IWD+R C Y+
Sbjct: 113 EFLASGSSDANLKIWDIRKKGCIQTYK 139
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
HS +S + F DG +VS D + ++WD +G+ L + P+ + F P +
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEG-PIRSLDFHPLEFLL 199
Query: 453 LAATLDNTLKLWD 491
+ D T+K WD
Sbjct: 200 ATGSADRTVKFWD 212
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L L H+ V +V F+ L+++ + G+ ++WD + ++ + S V+F
Sbjct: 51 LMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSN-CSAVEFH 109
Query: 435 PNGKYILAATLDNTLKLWDYSRGKC 509
P G+++ + + D LK+WD + C
Sbjct: 110 PFGEFLASGSSDANLKIWDIRKKGC 134
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 61 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
SRL ++ DD + +W + L +L GH++ V F+ L+++G+ +++WDV
Sbjct: 28 SRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDV 87
Query: 241 RTGK 252
K
Sbjct: 88 EEAK 91
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 497 QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 667
+ KM++ +TGH++ C F G +++ SGS D + IW+++ K +Q GH+
Sbjct: 89 EAKMVRAFTGHRSN--CSAVEFHPFG-EFLASGSSDANLKIWDIRKKGCIQTYKGHS 142
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 458 GDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 637
G + +I + ++ ++TY GH I F+ G+W+VSG DN+V +W+L +
Sbjct: 118 GSSDANLKIWDIRKKGCIQTYKGHSRGISTI--RFT-PDGRWVVSGGLDNVVKVWDLTAG 174
Query: 638 EIVQRLSGH 664
+++ H
Sbjct: 175 KLLHEFKFH 183
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
L+ + S D+T+K W+L + + + + + + V F+P + G D+S++++
Sbjct: 198 LLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVY 252
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH + D+AWS DS L++SAS DKT+++W +CL H+NYV C FNP N
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 196 IVSGSFDESVRIW 234
SGS D RIW
Sbjct: 328 FASGSIDGKARIW 340
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKL 485
D +L++S+S D R+W T QCL + N V+ V+F+P N + ++D ++
Sbjct: 282 DSNLLLSASKDKTVRLWRTGCDQCLH--VFHHNNYVTCVEFNPVNKNNFASGSIDGKARI 339
Query: 486 WDYS 497
W S
Sbjct: 340 WGLS 343
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 109 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
ELS+ ++ + GH ++ F+P + +G D V+IW +
Sbjct: 184 ELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 423 VKFSPNGKYILAATLDNTLKLW 488
+KFSP+GKY+ D +K+W
Sbjct: 204 LKFSPDGKYLATGGEDGVVKIW 225
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNP 410
M++ + H + + F+ DG + + DG+ +IW T S L + + P
Sbjct: 190 MVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEP 243
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 628
M++ GHK + + + FS GK++ +G ED +V IW +
Sbjct: 190 MVQKINGHKGKIWTL--KFS-PDGKYLATGGEDGVVKIWRI 227
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 117
I+GHK I + +S D + + + +D +K+W ++
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRIT 228
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L GH+ V ++ SNL++S S D++VR+W +C
Sbjct: 268 LYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQC 305
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 222
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 223 VRIWDVRTGKC 255
VR+W+ +TG+C
Sbjct: 170 VRLWNAKTGEC 180
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 237 CENREMLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 413
CE + LK L H V F+ R ++ S S D R+W+ +G+C++T D P
Sbjct: 132 CETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT--HDFYRP 189
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
++ + F G+ +LA + L +W Y++G
Sbjct: 190 IASIAFHAGGE-LLAVASGHKLHIWHYNKG 218
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 291 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TL 467
A F+ DG + S+ D +I D +G+CLK L P V+F P I+A+ +L
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPW-VVRFHPRHSEIVASGSL 166
Query: 468 DNTLKLWDYSRGKC*R 515
D+ ++LW+ G+C R
Sbjct: 167 DHEVRLWNAKTGECIR 182
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 649
K LK TGH+ + + F + + SGS D+ V +WN ++ E ++
Sbjct: 136 KCLKILTGHRRTPWVV--RFHPRHSEIVASGSLDHEVRLWNAKTGECIR 182
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 222
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 223 VRIWDVRTGKC 255
VR+W+ +TG+C
Sbjct: 170 VRLWNAKTGEC 180
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 237 CENREMLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 413
CE + LK L H V F+ R ++ S S D R+W+ +G+C++T D P
Sbjct: 132 CETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT--HDFYRP 189
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
++ + F G+ +LA + L +W Y++G
Sbjct: 190 IASIAFHAGGE-LLAVASGHKLHIWHYNKG 218
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 291 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TL 467
A F+ DG + S+ D +I D +G+CLK L P V+F P I+A+ +L
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPW-VVRFHPRHSEIVASGSL 166
Query: 468 DNTLKLWDYSRGKC*R 515
D+ ++LW+ G+C R
Sbjct: 167 DHEVRLWNAKTGECIR 182
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 649
K LK TGH+ + + F + + SGS D+ V +WN ++ E ++
Sbjct: 136 KCLKILTGHRRTPWVV--RFHPRHSEIVASGSLDHEVRLWNAKTGECIR 182
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 196 IVSGSFDESVRIWDV 240
+SGS D VRIWDV
Sbjct: 378 FISGSIDGKVRIWDV 392
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L H + + ++ G L+ SSS D R+W +CL+T N V+ V F+
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTF--THNNFVTCVAFN 371
Query: 435 P-NGKYILAATLDNTLKLWDYSR 500
P + Y ++ ++D +++WD +R
Sbjct: 372 PVDDNYFISGSIDGKVRIWDVTR 394
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 369 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
S C+ + + +KFSP+GKYI +A D +++W
Sbjct: 206 SSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
S K L KGH + +++ + L+ S S DE+VR+W V +C
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDEC 355
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 204 RQFR*ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 359
+QF+ E S M C ++E AH + A+ F+ DG I S+ D + R+W
Sbjct: 200 KQFK-ELSSM-CIDQEF----SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 117
++ S H I + +S D + I SA +D ++VW ++
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 196 IVSGSFDESVRIWDV 240
+SGS D VRIWDV
Sbjct: 378 FISGSIDGKVRIWDV 392
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L H + + ++ G L+ SSS D R+W +CL+T N V+ V F+
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTF--THNNFVTCVAFN 371
Query: 435 P-NGKYILAATLDNTLKLWDYSR 500
P + Y ++ ++D +++WD +R
Sbjct: 372 PVDDNYFISGSIDGKVRIWDVTR 394
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 369 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
S C+ + + +KFSP+GKYI +A D +++W
Sbjct: 206 SSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
S K L KGH + +++ + L+ S S DE+VR+W V +C
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDEC 355
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 204 RQFR*ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 359
+QF+ E S M C ++E AH + A+ F+ DG I S+ D + R+W
Sbjct: 200 KQFK-ELSSM-CIDQEF----SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 117
++ S H I + +S D + I SA +D ++VW ++
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 67.3 bits (157), Expect = 1e-11
Identities = 26/74 (35%), Positives = 49/74 (66%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ + +A S D R + S +D T+ +W+LS+ +C+ L GH++ V+ +++ + +L+
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 199 VSGSFDESVRIWDV 240
SGS D +V++WDV
Sbjct: 599 ASGSADCTVKLWDV 612
Score = 65.3 bits (152), Expect = 5e-11
Identities = 25/83 (30%), Positives = 48/83 (57%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+ ++GH +SDV W + I + S DKT+++W++ +G+C++ GH + V +P
Sbjct: 496 RIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPD 552
Query: 187 SNLIVSGSFDESVRIWDVRTGKC 255
+ SG D ++ +WD+ T +C
Sbjct: 553 GRYMASGDEDGTIMMWDLSTARC 575
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH + D +S S S D+T ++W + + L+ + GH + V +++P N I
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYI 514
Query: 199 VSGSFDESVRIWDVRTGKC 255
+GS D++VR+WDV+TG+C
Sbjct: 515 ATGSSDKTVRLWDVQTGEC 533
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/87 (27%), Positives = 49/87 (56%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ ++PL + +S V ++ + + I + S D R+WD +G+C++ I + +S +
Sbjct: 490 DRIQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS-LA 548
Query: 429 FSPNGKYILAATLDNTLKLWDYSRGKC 509
SP+G+Y+ + D T+ +WD S +C
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARC 575
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/90 (32%), Positives = 40/90 (44%)
Frame = +3
Query: 231 MGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 410
+G R L HS PV + F+ G ++SSS D R+W T L N
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL-VCYKGHNY 461
Query: 411 PVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
PV +FSP G Y + + D T ++W R
Sbjct: 462 PVWDAQFSPFGHYFASCSHDRTARIWSMDR 491
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+ PV F+ G S S+D RIW Q L+ + +S V + PN YI
Sbjct: 459 HNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH----LSDVDWHPNCNYI 514
Query: 453 LAATLDNTLKLWDYSRGKC*R 515
+ D T++LWD G+C R
Sbjct: 515 ATGSSDKTVRLWDVQTGECVR 535
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH + +S ++S+S D T+++W L KGH+ V+ F+P +
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 199 VSGSFDESVRIWDV 240
S S D + RIW +
Sbjct: 476 ASCSHDRTARIWSM 489
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E ++ H V ++ + DG + S DG +WD ++ +C+ L+ N V +
Sbjct: 532 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM-GHNSCVWSLS 590
Query: 429 FSPNGKYILAATLDNTLKLWD 491
+S G + + + D T+KLWD
Sbjct: 591 YSGEGSLLASGSADCTVKLWD 611
Score = 34.7 bits (76), Expect = 0.082
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 243
L GHS V+ F+P + ++S S D ++R+W +
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTK 448
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 581 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFG 721
+I +GS D V +W++Q+ E V+ GH VL + P ++ G
Sbjct: 513 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASG 559
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 371
+ PL H+ V ++ ++ +GSL+ S S D ++WD S
Sbjct: 576 ITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
G+++ SG ED + +W+L + + L GH V
Sbjct: 553 GRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 586
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSN 156
+ GH + +++S + L+ S S D T+K+W++ SS K K + + N
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGN 627
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 67.3 bits (157), Expect = 1e-11
Identities = 26/80 (32%), Positives = 52/80 (65%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH+ ++ + ++ + L+ S + D T VW +G+ L T +GHS V+CC+ + S+
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+++GS D++ ++WDV++GK
Sbjct: 93 RLITGSADQTAKLWDVKSGK 112
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 195
K I+ W ++ IVS +D +++W+ +GK LK GH + +
Sbjct: 175 KKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSH 234
Query: 196 IVSGSFDESVRIWDVRT 246
++GS D++ ++WD+RT
Sbjct: 235 FLTGSHDKTAKLWDMRT 251
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ H P++ + +NR+G L+ S + D +W +G+ L T + V S +
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGT-YRGHSGAVWCCDISRDS 91
Query: 444 KYILAATLDNTLKLWDYSRGK 506
++ + D T KLWD GK
Sbjct: 92 SRLITGSADQTAKLWDVKSGK 112
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N E L HS V +RD S +++ S D ++WD SG+ L T P
Sbjct: 67 DNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTF--KFGAPAR 124
Query: 420 FVKFSPNGKYILAATLDN 473
V FS G ++ T D+
Sbjct: 125 SVDFSV-GDHLAVITTDH 141
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 74 TYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK 118
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWD 491
IVS D RIWD +G+ LK ++ ++ + + + + L + D T KLWD
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 175 FNPQSNLIVSGSFDESVRIWDVRTGK 252
+ P + IVSG D ++RIWD TGK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGK 208
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 138
GHK I+ + ++D ++ S DKT K+W++ + +KT
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKT 257
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH + D++WS D+ L+ SAS DKT+++W++ S CL H++YV FNP N
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENY 383
Query: 196 IVSGSFDESVRIWDV 240
+SGS D VRIW++
Sbjct: 384 FMSGSIDGKVRIWNI 398
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 246 REMLKPL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
R M KPL H+ V + +++D L+ S+S D R+W S CL N V
Sbjct: 315 RIMEKPLYEFRGHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVFA--HNSYV 371
Query: 417 SFVKFSP-NGKYILAATLDNTLKLWDYS 497
+ V+F+P N Y ++ ++D +++W+ S
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWNIS 399
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 359
+ AH + A+ F+ DG + SS DG+ R+W
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
T+ H G++ V + D +++ SDD T KVW+ + C++TL+GH++ V +F+P
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
+ +I++GS D +VRIW T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 183
K H I VA ++S+SDD +K+W+ G C + +GHS+YV FNP
Sbjct: 93 KVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +N S S D +++IW++
Sbjct: 153 KDTNTFASASLDRTIKIWNL 172
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQS 189
GH + V ++ D+ SAS D+T+K+W L S TL H V C ++
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDK 199
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+++GS D + ++WD +T C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ +K AH+D + V + ++SSS D L ++WD G + + + V V
Sbjct: 90 DKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVT 149
Query: 429 FSPNGKYILA-ATLDNTLKLWD 491
F+P A A+LD T+K+W+
Sbjct: 150 FNPKDTNTFASASLDRTIKIWN 171
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
L AH V+ V + G +++ S D ++WD + C++TL + VS V F P
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-EGHTHNVSAVSFHP 239
Query: 438 NGKYILAATLDNTLKLW 488
I+ + D T+++W
Sbjct: 240 ELPIIITGSEDGTVRIW 256
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 569 TGGK--WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
TGG ++++GS+D+ +W+ Q+K VQ L GHT V P
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 273 HSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK- 446
HS V V FN +D + S+S D +IW+ S TL D V+ V + G
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVNCVDYFTGGDK 199
Query: 447 -YILAATLDNTLKLWDYSRGKC 509
Y++ + D+T K+WDY C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH +S V++ + +I++ S+D T+++W ++ + TL V+
Sbjct: 223 QTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKG 282
Query: 187 SNLIVSGSFDESVRI 231
S +V G + S+ +
Sbjct: 283 SRRVVIGYDEGSIMV 297
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
+ + ++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 217 QTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 33.1 bits (72), Expect = 0.25
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
+W+V+G++D + ++N + + ++ H D + C + P
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHP 109
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E+ + S+ V +V + I++S Y G IW+ + +K+ D PV K
Sbjct: 6 EIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKS-FDVTELPVRSAK 64
Query: 429 FSPNGKYILAATLDNTLKLWDYS 497
F ++++A D +++++Y+
Sbjct: 65 FIARKQWVVAGADDMFIRVYNYN 87
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/88 (21%), Positives = 41/88 (46%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+ + M+K PV + F +V+ + D R+++ + +K + + +
Sbjct: 45 QTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIK-VFEAHADYIR 103
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRG 503
V P Y+L+++ D +KLWD+ +G
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQS 189
GH + VA+S+D+R IVSAS D+T+K+W + G+C T+ GH +V C F+P +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNT 161
Query: 190 NL--IVSGSFDESVRIWDVRTGKC*N 261
+ IVS S+D++V++W+++ K N
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRN 187
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRL--IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
GHK +S V +S ++ + IVSAS DKT+KVW L + K +L GHS Y+ +P +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 193 LIVSGSFDESVRIWDVRTGK 252
L SG D + +WD+ GK
Sbjct: 207 LCASGGKDGVILLWDLAEGK 226
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/84 (30%), Positives = 49/84 (58%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
++ ++GH + DV SSD + +S S D L++W+L++G+ + GH+ V F+
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC 255
+ IVS S D ++++W+ G+C
Sbjct: 116 DNRQIVSASRDRTIKLWNT-LGEC 138
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L HS V V + DG +S S+DG R+WD A+G+ + + +S V FS +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLS-VAFSTDN 117
Query: 444 KYILAATLDNTLKLWDYSRGKC 509
+ I++A+ D T+KLW+ + G+C
Sbjct: 118 RQIVSASRDRTIKLWN-TLGEC 138
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N ++ L HS ++ V + DGSL S DG+ +WD A G+ L +L + +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIH 238
Query: 420 FVKFSPNGKYILAATLDNTLKLWD 491
+ FSPN +Y L A +N++++WD
Sbjct: 239 SLCFSPN-RYWLCAATENSIRIWD 261
Score = 51.2 bits (117), Expect = 9e-07
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSF 422
E + H+ V +V F+ D IVS+S D ++W+T G+C T+ + D VS
Sbjct: 96 ETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSC 154
Query: 423 VKFSPNG--KYILAATLDNTLKLWDYSRGKC*RH-IRDTRTKNIVSLPTLVSLAGSG*YR 593
V+FSPN I++A+ D T+K+W+ K + + N V++ SL SG
Sbjct: 155 VRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKD 214
Query: 594 DQKTTWCTYGTFNQRRLYRGCLDTRIQFSAR---ACHPTENIIASAALENDKTIQLWKSV 764
W L G + + FS C TEN I LE+ ++ K
Sbjct: 215 GVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVD 274
Query: 765 LKN 773
LK+
Sbjct: 275 LKS 277
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 222
+S +IV+AS DK++ +W+L S G + L GHS++V + +SGS+D
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 223 VRIWDVRTGK 252
+R+WD+ TG+
Sbjct: 87 LRLWDLATGE 96
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH ++ VA S D L S D + +W+L+ GK L +L+ S C F+P
Sbjct: 188 SLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC-FSPNR 246
Query: 190 NLIVSGSFDESVRIWDVRT 246
+ + + + S+RIWD+ +
Sbjct: 247 YWLCAAT-ENSIRIWDLES 264
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
G++ +SGS D + +W+L + E +R GHT VL
Sbjct: 75 GQFALSGSWDGELRLWDLATGETTRRFVGHTKDVL 109
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 524 GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
GHK C+ FS T IVS S D V +WNLQ+ ++ L GH+ + + P
Sbjct: 147 GHKEWVSCV--RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSP 203
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
T+ H+ G++ V + D +++ SDD T KVW+ + C++TL+GH++ V F+P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
+ +I++GS D +VRIW T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 183
K H I VA ++S+SDD +K+W+ G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNP 152
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +N S S D +++IW++
Sbjct: 153 KDTNTFASASLDRTIKIWNL 172
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQS 189
GH + V ++ D+ SAS D+T+K+W L S TL H V C ++
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+++GS D + ++WD +T C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ +K AHSD + V + ++SSS D L ++WD G + + + V V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVT 149
Query: 429 FSPNGKYILA-ATLDNTLKLWD 491
F+P A A+LD T+K+W+
Sbjct: 150 FNPKDTNTFASASLDRTIKIWN 171
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
+V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD G
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 273 HSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK- 446
HS V V FN +D + S+S D +IW+ S TL D V+ V + G
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYFTGGDK 199
Query: 447 -YILAATLDNTLKLWDYSRGKC 509
Y++ + D+T K+WDY C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
L AH V+ V + G +++ S D ++WD + C++TL + VS V F P
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-EGHTHNVSAVCFHP 239
Query: 438 NGKYILAATLDNTLKLW 488
I+ + D T+++W
Sbjct: 240 ELPIIITGSEDGTVRIW 256
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 515 TYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L GHT V
Sbjct: 180 TLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH +S V + + +I++ S+D T+++W ++ + TL V+ +
Sbjct: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 187 SNLIVSGSFDE 219
S +V G +DE
Sbjct: 283 SRRVVIG-YDE 292
Score = 33.5 bits (73), Expect = 0.19
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
+W+V+G++D + ++N + + V+ H+D + C + P
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHP 109
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
+ + ++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 217 QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E+ + L S+ V +V + I++S Y G IW+ + Q + + PV K
Sbjct: 6 EIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQT-QVMAKSFEVTELPVRSAK 64
Query: 429 FSPNGKYILAATLDNTLKLWDYS 497
F ++++A D +++++Y+
Sbjct: 65 FVARKQWVVAGADDMYIRVYNYN 87
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/88 (21%), Positives = 41/88 (46%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+ + M K PV + F +V+ + D R+++ + +K + + + +
Sbjct: 45 QTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVK-VFEAHSDYIR 103
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRG 503
V P Y+L+++ D +KLWD+ +G
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQS 189
GH + VA+S+D+R IVSAS D+T+K+W + G+C T+ GH +V C F+P +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNT 161
Query: 190 NL--IVSGSFDESVRIWDVRTGKC*N 261
+ IVS S+D++V++W+++ K N
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRN 187
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRL--IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
GHK +S V +S ++ + IVSAS DKT+KVW L + K TL GHS Y+ +P +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 193 LIVSGSFDESVRIWDVRTGK 252
L SG D + +WD+ GK
Sbjct: 207 LCASGGKDGVILLWDLAEGK 226
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/84 (30%), Positives = 49/84 (58%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
++ ++GH + DV SSD + +S S D L++W+L++G+ + GH+ V F+
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC 255
+ IVS S D ++++W+ G+C
Sbjct: 116 DNRQIVSASRDRTIKLWNT-LGEC 138
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ HS V V + DG +S S+DG R+WD A+G+ + + +S V FS +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLS-VAFSTDN 117
Query: 444 KYILAATLDNTLKLWDYSRGKC 509
+ I++A+ D T+KLW+ + G+C
Sbjct: 118 RQIVSASRDRTIKLWN-TLGEC 138
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N ++ L HS ++ V + DGSL S DG+ +WD A G+ L +L + +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIH 238
Query: 420 FVKFSPNGKYILAATLDNTLKLWD 491
+ FSPN +Y L A +N++++WD
Sbjct: 239 SLCFSPN-RYWLCAATENSIRIWD 261
Score = 50.0 bits (114), Expect = 2e-06
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSF 422
E + H+ V +V F+ D IVS+S D ++W+T G+C T+ + D VS
Sbjct: 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSC 154
Query: 423 VKFSPNG--KYILAATLDNTLKLWDYSRGKC*RHIR-DTRTKNIVSLPTLVSLAGSG*YR 593
V+FSPN I++A+ D T+K+W+ K + + N V++ SL SG
Sbjct: 155 VRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKD 214
Query: 594 DQKTTWCTYGTFNQRRLYRGCLDTRIQFSAR---ACHPTENIIASAALENDKTIQLWKSV 764
W L G + + FS C TEN I LE+ ++ K
Sbjct: 215 GVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVD 274
Query: 765 LK 770
LK
Sbjct: 275 LK 276
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSD-SRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCC 171
T+ H ++ +A D S +IV++S DK++ +W+L S G + + GHS++V
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 172 NFNPQSNLIVSGSFDESVRIWDVRTGK 252
+ +SGS+D +R+WD+ TG+
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGE 96
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T++GH ++ VA S D L S D + +W+L+ GK L +L+ S C F+P
Sbjct: 188 TLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC-FSPNR 246
Query: 190 NLIVSGSFDESVRIWDVRT 246
+ + + + S+RIWD+ +
Sbjct: 247 YWLCAAT-ENSIRIWDLES 264
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 488 GL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 667
G+ QR+M TGH + + + + G++ +SGS D + +W+L + E +R GHT
Sbjct: 53 GVAQRRM----TGHSHFVQDVVLS---SDGQFALSGSWDGELRLWDLATGESTRRFVGHT 105
Query: 668 DTVL 679
VL
Sbjct: 106 KDVL 109
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 524 GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
GHK C+ FS T IVS S D V +WNLQ+ ++ L+GH+ + + P
Sbjct: 147 GHKEWVSCV--RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSP 203
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
KT H + DV +SD+ S D+ + W++S+G+ ++ +GH V FN
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS 113
Query: 187 SNLIVSGSFDESVRIWDVRT 246
S+++VS FD S+R+WD R+
Sbjct: 114 SSVVVSAGFDRSLRVWDCRS 133
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH+ + ++ D ++ D+T+++W G +KT K H V + +
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 193 LIVSGSFDESVRIWDVRTGKC*NHYR 270
S D V WDV TG+ +R
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFR 99
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
++K +H V VH D + S D WD ++G+ ++ D V+ VKF
Sbjct: 52 LIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGE-VNAVKF 110
Query: 432 SPNGKYILAATLDNTLKLWD 491
+ + +++A D +L++WD
Sbjct: 111 NDSSSVVVSAGFDRSLRVWD 130
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/66 (21%), Positives = 34/66 (51%)
Frame = +1
Query: 37 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 216
+D ++ ++ S+D + W+L K L + H V +++P+ + +++ S D
Sbjct: 232 TDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVD 291
Query: 217 ESVRIW 234
++R+W
Sbjct: 292 GTIRVW 297
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
I+ S DG R +D G + + D+ PV+ + S +G +LA LD+TL+L D +
Sbjct: 159 IIGGSVDGTVRTFDMRIG---REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTT 215
Query: 501 GK 506
G+
Sbjct: 216 GE 217
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/87 (27%), Positives = 33/87 (37%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H V A FN DG+ ++ D R+W+ G +KT S N
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 444 KYILAATLDNTLKLWDYSRGKC*RHIR 524
K+ D + WD S G+ R R
Sbjct: 74 KFCSCGG-DRQVYYWDVSTGRVIRKFR 99
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 503 KMLKTYTGHKNEKY---CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDT 673
++L+ Y GH ++ + C N ++ GSED LV+ W+L +++ + H
Sbjct: 217 ELLQVYKGHISKSFKTDCCLTNSDAH----VIGGSEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 674 VLCTGLPP 697
V P
Sbjct: 273 VTSVSYHP 280
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
T+ H+ G++ V + D +++ SDD T KVW+ + C++TL GH++ V F+P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
+ +I++GS D +VRIW T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 183
K H I VA ++S+SDD +K+W+ +G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +N S S D +++IW++
Sbjct: 153 KDTNTFASASLDRTIKIWNL 172
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQS 189
GH + V ++ D+ SAS D+T+K+W L S TL H V C ++
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+++GS D + ++WD +T C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ +K AHSD + V + ++SSS D L ++WD +G + + + V V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVV 149
Query: 429 FSPNGKYILA-ATLDNTLKLWD 491
F+P A A+LD T+K+W+
Sbjct: 150 FNPKDTNTFASASLDRTIKIWN 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
+V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD G
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 273 HSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK- 446
HS V V FN +D + S+S D +IW+ S TL D V+ V + G
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYFTGGDK 199
Query: 447 -YILAATLDNTLKLWDYSRGKC*RHIRDTRTKNI 545
Y++ + D+T K+WDY C + + D T N+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNV 232
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
L AH V+ V + G +++ S D ++WD + C++TL D VS V F P
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNVSAVCFHP 239
Query: 438 NGKYILAATLDNTLKLW 488
I+ + D T+++W
Sbjct: 240 ELPIIITGSEDGTVRIW 256
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 515 TYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L GHT V
Sbjct: 180 TLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNV 232
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH +S V + + +I++ S+D T+++W ++ + TL V+ +
Sbjct: 223 QTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 187 SNLIVSGSFDE 219
S +V G +DE
Sbjct: 283 SRRVVIG-YDE 292
Score = 33.5 bits (73), Expect = 0.19
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
+W+V+G++D + ++N + + V+ H+D + C + P
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHP 109
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
+ + ++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 217 QTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
PV + F +V+ + D R+++ + +K + + + + V P Y+L++
Sbjct: 59 PVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSS 117
Query: 462 TLDNTLKLWDYSRG 503
+ D +KLWD+ G
Sbjct: 118 SDDMLIKLWDWENG 131
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
T+ H+ G++ V + D +++ SDD T KVW+ + C++TL GH++ V F+P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
+ +I++GS D +VRIW T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 183
K H I VA ++S+SDD +K+W+ +G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +N S S D +++IW++
Sbjct: 153 KDTNTFASASLDRTIKIWNL 172
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQS 189
GH + V ++ D+ SAS D+T+K+W L S TL H V C ++
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+++GS D + ++WD +T C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ +K AHSD + V + ++SSS D L ++WD +G + + + V V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVV 149
Query: 429 FSPNGKYILA-ATLDNTLKLWD 491
F+P A A+LD T+K+W+
Sbjct: 150 FNPKDTNTFASASLDRTIKIWN 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
+V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD G
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 273 HSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK- 446
HS V V FN +D + S+S D +IW+ S TL D V+ V + G
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYFTGGDK 199
Query: 447 -YILAATLDNTLKLWDYSRGKC*RHIRDTRTKNI 545
Y++ + D+T K+WDY C + + D T N+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNV 232
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
L AH V+ V + G +++ S D ++WD + C++TL D VS V F P
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNVSAVCFHP 239
Query: 438 NGKYILAATLDNTLKLW 488
I+ + D T+++W
Sbjct: 240 ELPIIITGSEDGTVRIW 256
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 515 TYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L GHT V
Sbjct: 180 TLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNV 232
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH +S V + + +I++ S+D T+++W ++ + TL V+ +
Sbjct: 223 QTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 187 SNLIVSGSFDE 219
S +V G +DE
Sbjct: 283 SRRVVIG-YDE 292
Score = 33.5 bits (73), Expect = 0.19
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
+W+V+G++D + ++N + + V+ H+D + C + P
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHP 109
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
+ + ++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 217 QTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
PV + F +V+ + D R+++ + +K + + + + V P Y+L++
Sbjct: 59 PVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSS 117
Query: 462 TLDNTLKLWDYSRG 503
+ D +KLWD+ G
Sbjct: 118 SDDMLIKLWDWENG 131
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
T+ H+ G++ V + D +++ SDD T KVW+ + C++TL GH++ V F+P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
+ +I++GS D +VRIW T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 183
K H I VA ++S+SDD +K+W+ +G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +N S S D +++IW++
Sbjct: 153 KDTNTFASASLDRTIKIWNL 172
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQS 189
GH + V ++ D+ SAS D+T+K+W L S TL H V C ++
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+++GS D + ++WD +T C
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSC 221
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ +K AHSD + V + ++SSS D L ++WD +G + + + V V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVV 149
Query: 429 FSPNGKYILA-ATLDNTLKLWD 491
F+P A A+LD T+K+W+
Sbjct: 150 FNPKDTNTFASASLDRTIKIWN 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
+V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD G
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 273 HSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK- 446
HS V V FN +D + S+S D +IW+ S TL D V+ V + G
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYFTGGDK 199
Query: 447 -YILAATLDNTLKLWDYSRGKC*RHIRDTRTKNI 545
Y++ + D+T K+WDY C + + D T N+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNV 232
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
L AH V+ V + G +++ S D ++WD + C++TL D VS V F P
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNVSAVCFHP 239
Query: 438 NGKYILAATLDNTLKLW 488
I+ + D T+++W
Sbjct: 240 ELPIIITGSEDGTVRIW 256
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 515 TYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L GHT V
Sbjct: 180 TLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNV 232
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH +S V + + +I++ S+D T+++W ++ + TL V+ +
Sbjct: 223 QTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 187 SNLIVSGSFDE 219
S +V G +DE
Sbjct: 283 SRRVVIG-YDE 292
Score = 33.5 bits (73), Expect = 0.19
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
+W+V+G++D + ++N + + V+ H+D + C + P
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHP 109
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
+ + ++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 217 QTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
PV + F +V+ + D R+++ + +K + + + + V P Y+L++
Sbjct: 59 PVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSS 117
Query: 462 TLDNTLKLWDYSRG 503
+ D +KLWD+ G
Sbjct: 118 SDDMLIKLWDWENG 131
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNP 183
GHK + VAW+S+ + S S D+T ++W + S K L+ LKGH++ V ++P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE-LKGHTDSVDQLCWDP 76
Query: 184 Q-SNLIVSGSFDESVRIWDVRTGKC 255
+ S+L+ + S D+SVR+WD R+GKC
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKC 101
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
+ GH + + W S L+ +AS DK++++W+ SGKC + ++ S + P
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVE-LSGENINITYKPDG 120
Query: 190 NLIVSGSFDESVRIWDVRTGK 252
+ G+ D+ + I DVR K
Sbjct: 121 THVAVGNRDDELTILDVRKFK 141
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T++ H G +A R S D + +W++S CL+T V +FN
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSG 245
Query: 190 NLIVSGSFDESVRIWDVRTGK 252
I S S D + I +V+TG+
Sbjct: 246 EYIASASEDLFIDIANVQTGR 266
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSP 437
L H+D V + ++ + L+ ++S D R+WD SG+C + + + +N ++ + P
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINIT---YKP 118
Query: 438 NGKYILAATLDNTLKLWDYSRGK 506
+G ++ D+ L + D + K
Sbjct: 119 DGTHVAVGNRDDELTILDVRKFK 141
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L L AH+ + + G S D L +WD + CL+T + PV + F+
Sbjct: 184 LDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLE-WPVRTISFN 242
Query: 435 PNGKYILAATLDNTLKLWDYSRGK 506
+G+YI +A+ D + + + G+
Sbjct: 243 YSGEYIASASEDLFIDIANVQTGR 266
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ----SKEIVQRLSGHTDTV 676
+ Y GHK + + + N + G + SGS D IWN++ SK L GHTD+V
Sbjct: 14 REYQGHKKKVHSVAWN---SNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSV 69
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNG 443
H V +V +N +G+ + S S D RIW+ + + V + + P
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKH 78
Query: 444 KYILA-ATLDNTLKLWDYSRGKC 509
++A A+ D +++LWD GKC
Sbjct: 79 SDLVATASGDKSVRLWDARSGKC 101
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 142 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
+GH V +N + SGS D++ RIW++
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 64.9 bits (151), Expect = 7e-11
Identities = 24/80 (30%), Positives = 52/80 (65%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+++GS D++ ++WDV++GK
Sbjct: 66 RLITGSADQTAKLWDVKSGK 85
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 195
K I+ W ++ IVS +DK +++W+ +GK LK GH + +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 196 IVSGSFDESVRIWDVRT 246
++GS D++ ++WD+RT
Sbjct: 208 FLTGSLDKTAKLWDMRT 224
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ H P++ + +NR+G L+ S + D +W +G+ L T N V S +
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGT-YRGHNGAVWCCDVSRDS 64
Query: 444 KYILAATLDNTLKLWDYSRGK 506
++ + D T KLWD GK
Sbjct: 65 SRLITGSADQTAKLWDVKSGK 85
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWD 491
IVS D + RIWD +G+ LK ++ ++ + + + + L +LD T KLWD
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N E L H+ V +RD S +++ S D ++WD SG+ L T N P
Sbjct: 40 DNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF--KFNAPTR 97
Query: 420 FVKFSPNGKYILAAT 464
V F+ + + T
Sbjct: 98 SVDFAVGDRLAVITT 112
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 175 FNPQSNLIVSGSFDESVRIWDVRTGK 252
+ P + IVSG D+ +RIWD TGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 138
GHK I+ + ++D ++ S DKT K+W++ + LKT
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKT 230
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 64.9 bits (151), Expect = 7e-11
Identities = 24/80 (30%), Positives = 52/80 (65%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+++GS D++ ++WDV++GK
Sbjct: 66 RLITGSADQTAKLWDVKSGK 85
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 195
K I+ W ++ IVS +DK +++W+ +GK LK GH + +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 196 IVSGSFDESVRIWDVRT 246
++GS D++ ++WD+RT
Sbjct: 208 FLTGSLDKTAKLWDMRT 224
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ H P++ + +NR+G L+ S + D +W +G+ L T N V S +
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGT-YRGHNGAVWCCDVSRDS 64
Query: 444 KYILAATLDNTLKLWDYSRGK 506
++ + D T KLWD GK
Sbjct: 65 SRLITGSADQTAKLWDVKSGK 85
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWD 491
IVS D + RIWD +G+ LK ++ ++ + + + + L +LD T KLWD
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N E L H+ V +RD S +++ S D ++WD SG+ L T N P
Sbjct: 40 DNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF--KFNAPTR 97
Query: 420 FVKFSPNGKYILAAT 464
V F+ + + T
Sbjct: 98 SVDFAVGDRLAVITT 112
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GHK I+ + ++D ++ S DKT K+W++ + LKT V + +P N +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHV 249
Query: 199 VSGSFDE--SVRIWDVRTGK 252
V G + +V D R GK
Sbjct: 250 VLGGGQDASAVTTTDHRAGK 269
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 175 FNPQSNLIVSGSFDESVRIWDVRTGK 252
+ P + IVSG D+ +RIWD TGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 64.9 bits (151), Expect = 7e-11
Identities = 24/80 (30%), Positives = 52/80 (65%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+++GS D++ ++WDV++GK
Sbjct: 66 RLITGSADQTAKLWDVKSGK 85
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 195
K I+ W ++ IVS +DK +++W+ +GK LK GH + +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 196 IVSGSFDESVRIWDVRT 246
++GS D++ ++WD+RT
Sbjct: 208 FLTGSLDKTAKLWDMRT 224
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
+ H P++ + +NR+G L+ S + D +W +G+ L T N V S +
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGT-YRGHNGAVWCCDVSRDS 64
Query: 444 KYILAATLDNTLKLWDYSRGK 506
++ + D T KLWD GK
Sbjct: 65 SRLITGSADQTAKLWDVKSGK 85
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWD 491
IVS D + RIWD +G+ LK ++ ++ + + + + L +LD T KLWD
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+N E L H+ V +RD S +++ S D ++WD SG+ L T N P
Sbjct: 40 DNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF--KFNAPTR 97
Query: 420 FVKFSPNGKYILAAT 464
V F+ + + T
Sbjct: 98 SVDFAVGDRLAVITT 112
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GHK I+ + ++D ++ S DKT K+W++ + LKT V + +P N +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHV 249
Query: 199 VSGSFDE--SVRIWDVRTGK 252
V G + +V D R GK
Sbjct: 250 VLGGGQDASAVTTTDHRAGK 269
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 175 FNPQSNLIVSGSFDESVRIWDVRTGK 252
+ P + IVSG D+ +RIWD TGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 64.5 bits (150), Expect = 9e-11
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFN 180
E+ + GH+ ++ +AW+S+ L++S SDD + +W SS K L ++ GH+ +FC F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 181 PQSN--LIVSGSFDESVRIWD 237
P+++ L+VSG+ D VR+++
Sbjct: 103 PETSDELVVSGAGDAEVRLFN 123
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
I S SDD +WE +G+ +K L G + + C +P +++ + D +++IW
Sbjct: 636 IASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +3
Query: 276 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 455
+D A + G I S S DG IW+ +G+ +K L+ D++ ++ ++ P +
Sbjct: 621 TDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESV-LNCIQCHPFDSVVA 679
Query: 456 AATLDNTLKLW 488
+ +DNT+K+W
Sbjct: 680 TSGIDNTIKIW 690
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 545 CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRL-SGHTDTVLCTGLPP 697
C+ A + G ++SGS+D + IWN S++++ + +GHT + CT P
Sbjct: 52 CVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-- 437
L H V+A+ +N +GSL++S S D IW+ +S + L ++ + KF P
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 438 NGKYILAATLDNTLKLWDYSR 500
+ + +++ D ++L++ SR
Sbjct: 106 SDELVVSGAGDAEVRLFNTSR 126
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
M + Y GH N I A+F G++I SGS+D +IW Q+ +++ L G + C
Sbjct: 609 MKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNC 668
Query: 683 TGLPP 697
P
Sbjct: 669 IQCHP 673
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
L+GH V +N +L++SGS D + IW+ + K
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRK 83
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH ++ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 199 VSGSFDESVRIWDVRTGK 252
+S S D +VR WD + K
Sbjct: 407 LSASLDGTVRAWDFKRYK 424
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H V+ V ++ D L+ + + D ++W+ SG C T + N V+ + F + +
Sbjct: 348 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN-AVTALHFMADNHSL 406
Query: 453 LAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
L+A+LD T++ WD+ R K + + VSL
Sbjct: 407 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSL 440
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPN 440
L H PV + F+ L+ SSS+D R+WD AS ++T N V V F P+
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF--RHNHDVLTVAFRPD 530
Query: 441 GKYILAATLDNTLKLWDYSRG 503
GK + ++TLD + WD G
Sbjct: 531 GKQLASSTLDGQINFWDTIEG 551
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+SGH+ + + +S ++L+ S+S D T+++W++ + K H++ V F P
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 193 LIVSGSFDESVRIWDVRTG 249
+ S + D + WD G
Sbjct: 533 QLASSTLDGQINFWDTIEG 551
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 97 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L VW+ + + +GH V C ++P S L+ +G+ D V++W+V +G C
Sbjct: 331 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTC 383
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--PNGK 446
H++ V+A+HF D ++S+S DG R WD + KT P FV + P+G
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP--TPRQFVSLTADPSGD 447
Query: 447 YILAATLDN-TLKLWDYSRGK 506
+ A TLD+ + +W G+
Sbjct: 448 VVCAGTLDSFEIFVWSKKTGQ 468
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 85 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
D + VW +G+ L GH V F+P + L+ S S+D +VR+WDV K
Sbjct: 455 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 510
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF-CCNFNPQ 186
T + H ++ + + +D+ ++SAS D T++ W+ K KT + F +P
Sbjct: 386 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPS 445
Query: 187 SNLIVSGSFDE-SVRIWDVRTGK 252
+++ +G+ D + +W +TG+
Sbjct: 446 GDVVCAGTLDSFEIFVWSKKTGQ 468
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 312 GSLIVSSSYDGL-CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
G ++ + + D +W +GQ +K ++ PV + FSP + + +++ D T++LW
Sbjct: 446 GDVVCAGTLDSFEIFVWSKKTGQ-IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 504
Query: 489 DYSRGK 506
D K
Sbjct: 505 DVFASK 510
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
H+ V V F DG + SS+ DG WDT G + T+
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 557
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH ++ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 199 VSGSFDESVRIWDVRTGK 252
+S S D +VR WD + K
Sbjct: 447 LSASLDGTVRAWDFKRYK 464
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H V+ V ++ D L+ + + D ++W+ SG C T + N V+ + F + +
Sbjct: 388 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN-AVTALHFMADNHSL 446
Query: 453 LAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
L+A+LD T++ WD+ R K + + VSL
Sbjct: 447 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSL 480
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPN 440
L H PV + F+ L+ SSS+D R+WD AS ++T N V V F P+
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF--RHNHDVLTVAFRPD 570
Query: 441 GKYILAATLDNTLKLWDYSRG 503
GK + ++TLD + WD G
Sbjct: 571 GKQLASSTLDGQINFWDTIEG 591
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+SGH+ + + +S ++L+ S+S D T+++W++ + K H++ V F P
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 193 LIVSGSFDESVRIWDVRTG 249
+ S + D + WD G
Sbjct: 573 QLASSTLDGQINFWDTIEG 591
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 97 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L VW+ + + +GH V C ++P S L+ +G+ D V++W+V +G C
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTC 423
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--PNGK 446
H++ V+A+HF D ++S+S DG R WD + KT P FV + P+G
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP--TPRQFVSLTADPSGD 487
Query: 447 YILAATLDN-TLKLWDYSRGK 506
+ A TLD+ + +W G+
Sbjct: 488 VVCAGTLDSFEIFVWSKKTGQ 508
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 85 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
D + VW +G+ L GH V F+P + L+ S S+D +VR+WDV K
Sbjct: 495 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 550
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF-CCNFNPQ 186
T + H ++ + + +D+ ++SAS D T++ W+ K KT + F +P
Sbjct: 426 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPS 485
Query: 187 SNLIVSGSFDE-SVRIWDVRTGK 252
+++ +G+ D + +W +TG+
Sbjct: 486 GDVVCAGTLDSFEIFVWSKKTGQ 508
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 312 GSLIVSSSYDGL-CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
G ++ + + D +W +GQ +K ++ PV + FSP + + +++ D T++LW
Sbjct: 486 GDVVCAGTLDSFEIFVWSKKTGQ-IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Query: 489 DYSRGK 506
D K
Sbjct: 545 DVFASK 550
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
H+ V V F DG + SS+ DG WDT G + T+
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 597
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T++GH + +A S+ + SA DDK +K W+L K +++ GH + V+C +P
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 190 NLIVSGSFDESVRIWDVRT 246
+++++G D R+WD+RT
Sbjct: 273 DVLLTGGRDSVCRVWDIRT 291
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
++ GH G+ +A ++++ D +VW++ + + L GH N V P
Sbjct: 254 RSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPT 313
Query: 187 SNLIVSGSFDESVRIWDVRTGK 252
+V+GS D +++ WD+R GK
Sbjct: 314 DPQVVTGSHDTTIKFWDLRYGK 335
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+ I GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHY 267
+ S D+ V+ WD+ K Y
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSY 256
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+SGH + V +V+ S D T+K W+L GK + TL H V +P+ N
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 193 LIVSGSFDES 222
S S D +
Sbjct: 358 AFASASADNT 367
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/77 (27%), Positives = 46/77 (59%)
Frame = +2
Query: 446 IYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
++ GD +Q + L Q K++++Y GH + YC+ + ++ +++G D++ +W+
Sbjct: 233 MFSAGDDKQ-VKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDV---LLTGGRDSVCRVWD 288
Query: 626 LQSKEIVQRLSGHTDTV 676
+++K + LSGH +TV
Sbjct: 289 IRTKMQIFALSGHDNTV 305
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 398
+C D+ E ++++ H V + + ++++ D +CR+WD + + L
Sbjct: 243 KCWDL--EQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSG 300
Query: 399 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
DN V V P ++ + D T+K WD GK
Sbjct: 301 HDN-TVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGK 335
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 124 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
K + ++GH +V F+P + +GS D +++IWDV TG
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
Score = 33.5 bits (73), Expect = 0.19
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 7/172 (4%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H + V +V +V+ S+D + WD G+ + TL V + P
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL-THHKKSVRAMTLHPKE 356
Query: 444 KYILAATLDNTLKLWDYSRGK-C*RHIRDTRTKNIVSLPTL----VSLAGSG*YRDQKTT 608
+A+ DNT K + +G+ C H ++ K I++ + V + G
Sbjct: 357 NAFASASADNT-KKFSLPKGEFC--HNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWD 413
Query: 609 WCTYGTFNQRR--LYRGCLDTRIQFSARACHPTENIIASAALENDKTIQLWK 758
W + +F Q + G L++ A AC+ E DKTI++WK
Sbjct: 414 WKSGHSFQQSETIVQPGSLESEAGIYA-ACYDNTG-SRLVTCEADKTIKMWK 463
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 581 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
++ S +D V W+L+ ++++ GH V C L P
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHP 270
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKH-YRF 718
+W +GS D + IW++ + + L+GH + V GL +H Y F
Sbjct: 189 EWFCTGSADRTIKIWDVATGVLKLTLTGHIEQV--RGLAVSNRHTYMF 234
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
V V F P+ ++ + D T+K+WD + G
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T++GH + +A S+ + SA DDK +K W+L K +++ GH + V+C +P
Sbjct: 207 TLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTL 266
Query: 190 NLIVSGSFDESVRIWDVRT 246
+++++G D R+WD+RT
Sbjct: 267 DVVLTGGRDSVCRVWDIRT 285
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+ + GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHY 267
+ S D+ V+ WD+ K Y
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQNKVIRSY 250
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
++ GH G+ +A ++++ D +VW++ + + L H + VF P
Sbjct: 248 RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPT 306
Query: 187 SNLIVSGSFDESVRIWDVRTGK 252
+++GS D +++ WD+R GK
Sbjct: 307 DPQVITGSHDSTIKFWDLRYGK 328
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 216
+++ S D T+K W+L GK + T+ H V +P+ N VS S D
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD 358
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/96 (22%), Positives = 44/96 (45%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 398
+C D+ E ++++ H V + + ++++ D +CR+WD + + L
Sbjct: 237 KCWDL--EQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPH 294
Query: 399 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
D + V V P ++ + D+T+K WD GK
Sbjct: 295 DSD--VFSVLARPTDPQVITGSHDSTIKFWDLRYGK 328
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 124 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
K + L+GH +V F+P + +GS D +++IWDV TG
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/64 (23%), Positives = 38/64 (59%)
Frame = +2
Query: 446 IYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
++ GD +Q + L Q K++++Y GH + YC+ + ++ +++G D++ +W+
Sbjct: 227 MFSAGDDKQ-VKCWDLEQNKVIRSYHGHLHGVYCLALHPTL---DVVLTGGRDSVCRVWD 282
Query: 626 LQSK 637
+++K
Sbjct: 283 IRTK 286
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 581 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
++ S +D V W+L+ ++++ GH V C L P
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHP 264
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
V V F P+ ++ + D T+K+WD + G
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
LP SD S + D +++ S+D + WD G+ + T I + V + P
Sbjct: 292 LPHDSDVFSVLARPTDPQ-VITGSHDSTIKFWDLRYGKSMAT-ITNHKKTVRAMALHPKE 349
Query: 444 KYILAATLDNTLK 482
++A+ DN K
Sbjct: 350 NDFVSASADNIKK 362
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKH-YRF 718
+W +GS D + IW++ + + L+GH V GL +H Y F
Sbjct: 183 EWFCTGSADRTIKIWDVATGVLKLTLTGHIGQV--RGLAVSNRHTYMF 228
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/83 (33%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP- 183
K ++GH ++D +SS+++ I S+S DKT++VWELS G C++ + G S +C F+P
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPV 268
Query: 184 QSNLIVSGSFDESVRIWDVRTGK 252
+N + +G+ ++ + +++ TG+
Sbjct: 269 NNNFLSAGNANKELTVFNFSTGR 291
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E +LK L HS V+ F+ + I SSS D R+W+ + G C++ + P
Sbjct: 204 EEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGIS--PQY 261
Query: 420 FVKFSP-NGKYILAATLDNTLKLWDYSRGK 506
++F P N ++ A + L ++++S G+
Sbjct: 262 CIRFHPVNNNFLSAGNANKELTVFNFSTGR 291
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +1
Query: 55 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
S L ASD L LK L GHS V +F+ + I S S D+++R+W
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVW 243
Query: 235 DVRTGKC 255
++ G C
Sbjct: 244 ELSRGVC 250
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 429 FSPNGKYILAATLDNTLKLWDYSRGKC*RHI 521
FS N +YI +++LD T+++W+ SRG C R I
Sbjct: 224 FSSNNQYIASSSLDKTIRVWELSRGVCIRVI 254
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
IV+ S+D + ++L+ K C+ L+GH V C +N NL+ S F V +W
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+ H G++ +++S D ++S S D+T ++ L SGK LK +GH++YV F
Sbjct: 299 RRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSD 358
Query: 187 SNLIVSGSFDESVRIWDVRTGKC 255
+ I++ S D +V++WD +T C
Sbjct: 359 GSRIITASSDCTVKVWDSKTTDC 381
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H DPV + F+RD ++ S S DG +IW +G C++ D + V+ + FS +G +
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRR-FDAHSQGVTSLSFSRDGSQL 320
Query: 453 LAATLDNTLKLWDYSRGKC*RHIR 524
L+ + D T ++ GK + R
Sbjct: 321 LSTSFDQTARIHGLKSGKLLKEFR 344
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/76 (30%), Positives = 44/76 (57%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 222
+ +S DS ++ S S D +K+W + +G C++ HS V +F+ + ++S SFD++
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Query: 223 VRIWDVRTGKC*NHYR 270
RI +++GK +R
Sbjct: 329 ARIHGLKSGKLLKEFR 344
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG--------HSNYVFCCN 174
G K +S D + + S+S D ++VW+ SGK K L+ H + V C +
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCID 270
Query: 175 FNPQSNLIVSGSFDESVRIWDVRTGKC 255
F+ S ++ SGS D ++IW +RTG C
Sbjct: 271 FSRDSEMLASGSQDGKIKIWRIRTGVC 297
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
++ AHS V+++ F+RDGS ++S+S+D RI SG+ LK V+ F+
Sbjct: 298 IRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKE-FRGHTSYVNHAIFT 356
Query: 435 PNGKYILAATLDNTLKLWDYSRGKC 509
+G I+ A+ D T+K+WD C
Sbjct: 357 SDGSRIITASSDCTVKVWDSKTTDC 381
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDD----NPPVSFVKFSPNGKYILA 458
F+ DG + SSS DG +WD SG+ K L D+ + PV + FS + + + +
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 459 ATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
+ D +K+W G C R D ++ + SL
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRF-DAHSQGVTSL 311
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 234 GCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 389
G ++ ++LK H+ V+ F DGS I+++S D ++WD+ + CL+T
Sbjct: 333 GLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQT 384
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
K GH ++ ++SD I++AS D T+KVW+ + CL+T K
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
Score = 34.3 bits (75), Expect = 0.11
Identities = 10/27 (37%), Positives = 22/27 (81%)
Frame = +3
Query: 426 KFSPNGKYILAATLDNTLKLWDYSRGK 506
+FSP+G+++ ++++D +++WDY GK
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGK 246
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 497 QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
Q +++K+++ E A T G WI ED +Y +N QS + + H V
Sbjct: 426 QGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDV 485
Query: 677 LCTGLPPHR 703
+ PHR
Sbjct: 486 IGITHHPHR 494
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
+++ H + CI +FS + + SGS+D + IW +++ ++R H+ V
Sbjct: 257 ESFMMHDDPVLCI--DFS-RDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGV 308
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 63.7 bits (148), Expect = 2e-10
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
GH+ +S V +S ++ IVSAS DKT+KVW LS+ K TL GH+ YV +P +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 193 LIVSGSFDESVRIWDVRTGK 252
L SG D V +WD+ GK
Sbjct: 208 LCASGGKDGVVLLWDLAEGK 227
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQ 186
GH + VA+S D+R IVSAS D+T+K+W + G+C T+ +GH ++V C F+P
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 187 S--NLIVSGSFDESVRIWDVRTGK 252
+ IVS S+D++V++W++ K
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCK 185
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/84 (30%), Positives = 48/84 (57%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
++ ++GH + DV SSD + +S S D L++W+L++G + GH+ V F+
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC 255
+ IVS S D ++++W+ G+C
Sbjct: 116 DNRQIVSASRDRTIKLWNT-LGEC 138
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L HS V V + DG +S S+DG R+WD A+G + + +S V FS +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS-VAFSLDN 117
Query: 444 KYILAATLDNTLKLWDYSRGKC 509
+ I++A+ D T+KLW+ + G+C
Sbjct: 118 RQIVSASRDRTIKLWN-TLGEC 138
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
N ++ L H+ VS V + DGSL S DG+ +WD A G+ L +L + N +
Sbjct: 183 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--EANSVIHA 240
Query: 423 VKFSPNGKYILAATLDNTLKLWD 491
+ FSPN +Y L A ++ +K+WD
Sbjct: 241 LCFSPN-RYWLCAATEHGIKIWD 262
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSS-----GKCLKTLKGHSNYVFCC 171
T+ H ++ +A D+ +IVSAS DK++ +W+L+ G + L GHS++V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 172 NFNPQSNLIVSGSFDESVRIWDVRTG 249
+ +SGS+D +R+WD+ G
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAG 95
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T++GH +S VA S D L S D + +W+L+ GK L +L+ +S C F+P
Sbjct: 189 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC-FSPNR 247
Query: 190 NLIVSGSFDESVRIWDVRT 246
+ + + + ++IWD+ +
Sbjct: 248 YWLCAAT-EHGIKIWDLES 265
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 273 HSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
H D VS V F N IVS+S+D ++W+ ++ + TL VS V SP+G
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY-VSTVAVSPDGS 207
Query: 447 YILAATLDNTLKLWDYSRGK 506
+ D + LWD + GK
Sbjct: 208 LCASGGKDGVVLLWDLAEGK 227
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 524 GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
GH++ C+ FS T IVS S D V +WNL + ++ L+GHT V + P
Sbjct: 148 GHRDWVSCV--RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 204
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
G++ +SGS D + +W+L + +R GHT VL
Sbjct: 75 GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL 109
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ H I S ++ + +AS DKT+K+W L K K L GH +V+ C+F+
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+V+ S D + R+W +R GK
Sbjct: 273 YLVTASSDTTARLWSMRAGK 292
Score = 45.2 bits (102), Expect = 6e-05
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 171
EK ++GH+ + D +S D +V+AS D T ++W + +GK + H CC
Sbjct: 252 EKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCC 307
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H + V + ++ S S+D ++K+W+L +C + + S V +P ++
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP-VNTVVLHPNQTELI 141
Query: 202 SGSFDESVRIWDVRTGKC 255
SG + ++R+WD+R C
Sbjct: 142 SGDQNGNIRVWDLRADLC 159
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
+H+ V AV F G ++ S S DG +IWD +C + PV+ V PN
Sbjct: 82 SHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVS--PVNTVVLHPNQTE 139
Query: 450 ILAATLDNTLKLWDYSRGKC 509
+++ + +++WD C
Sbjct: 140 LISGDQNGNIRVWDLRADLC 159
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E L L AH+ + + + ++S D +IW+ G L+ ++ V
Sbjct: 208 EPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNL-DGFKLEKVLTGHERWVWDCD 266
Query: 429 FSPNGKYILAATLDNTLKLWDYSRGK 506
FS +G+Y++ A+ D T +LW GK
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC*NHYRRI 276
++ H+ V F +++ SGS D SV+IWD+R +C +R +
Sbjct: 77 VRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSV 125
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFV 425
+P P+ ++ DG+++V+++ G C +W + + T + N +
Sbjct: 164 VPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKC 223
Query: 426 KFSPNGKYILAATLDNTLKLWD 491
SP KY+ A+ D T+K+W+
Sbjct: 224 LLSPGNKYLATASSDKTVKIWN 245
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
PV+ V + + + ++S +G R+WD + C L+ + P+ + +G ++AA
Sbjct: 127 PVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAA 186
Query: 462 TLDNTLKLW 488
T +W
Sbjct: 187 NDRGTCYVW 195
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/59 (22%), Positives = 35/59 (59%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
+ +AS D+T+++W+ +G+C + + +V P+ +V+ + + +R++D+R+
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVA-ACNPHIRLFDLRS 70
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 572 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
G K++ + S D V IWNL ++ + L+GH
Sbjct: 228 GNKYLATASSDKTVKIWNLDGFKLEKVLTGH 258
Score = 29.5 bits (63), Expect = 3.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 196 IVSGSFDESVRIWDVRTGKC 255
+ + S D+++R+W RTG+C
Sbjct: 13 LATASHDQTIRLWQARTGRC 32
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSN 192
GH I D++WS + ++S+S D+T+++W + SS +C++ H ++V C FNP N
Sbjct: 361 GHTGEILDLSWS-EKGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDN 418
Query: 193 LIVSGSFDESVRIWDV 240
+SGS D VRIWDV
Sbjct: 419 YFISGSIDGKVRIWDV 434
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +3
Query: 267 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
P SD V + D + + D +C++ +S L+T + +F F+ +GK
Sbjct: 506 PGDSDKVMVT--SADSQIRIICGVDTICKLKKASS---LRTTLMSP----TFASFTSDGK 556
Query: 447 YILAATLDNTLKLWDYSR 500
+I++ ++ + +WD+S+
Sbjct: 557 HIVSTIEESGIHVWDFSQ 574
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 195
+GH + V W L+VS D+ +K+W+ SG+ L +L GH N V +N N
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 196 IVSGSFDESVRIWDVRTGK 252
+++ S D+ ++++D+RT K
Sbjct: 325 LLTASKDQIIKLYDIRTMK 343
Score = 52.8 bits (121), Expect = 3e-07
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H V +V ++ SL+VS D L ++WDT SG+ L +L N +S VK++ NG ++
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLS-VKWNQNGNWL 325
Query: 453 LAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
L A+ D +KL+D K + R TK++ SL
Sbjct: 326 LTASKDQIIKLYDIRTMKELQSFRG-HTKDVTSL 358
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 186
++ GHK + V W+ + +++AS D+ +K++++ + K L++ +GH+ V ++P
Sbjct: 305 SLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCH 364
Query: 187 SNLIVSGSFDESVRIWDV 240
VSGS D S+ W V
Sbjct: 365 EEYFVSGSSDGSICHWIV 382
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 19/98 (19%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-----------GKCLKTLK------ 144
+ HK I D+++ S SDD T+KVW+ + GK + ++
Sbjct: 204 TAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPC 263
Query: 145 --GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
GH V +++P +L+VSG D+ V++WD R+G+
Sbjct: 264 NAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGR 301
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 180
FE + H I + WS + +VS D TLK W+ + H + +F
Sbjct: 157 FEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFC 216
Query: 181 PQSNLIVSGSFDESVRIWD 237
S S D +V++WD
Sbjct: 217 KTDLKFCSCSDDTTVKVWD 235
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHR 703
GHKN + N G W+++ S+D ++ ++++++ + +Q GHT V P
Sbjct: 308 GHKNIVLSVKWN---QNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCH 364
Query: 704 KHY 712
+ Y
Sbjct: 365 EEY 367
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFN 180
++ GH ++ +AW VS S D ++ W + ++ H N V+ ++
Sbjct: 346 QSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWH 405
Query: 181 PQSNLIVSGSFDESVRIW 234
P L+ SGS D + + W
Sbjct: 406 PIGYLLCSGSNDHTTKFW 423
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/75 (18%), Positives = 33/75 (44%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
+++ ++ I+ V W+ R +++ S +W S L+ H + ++
Sbjct: 118 SLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNE 177
Query: 190 NLIVSGSFDESVRIW 234
N +VSG +++ W
Sbjct: 178 NYMVSGDDGGTLKYW 192
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
N EM+ L AH P+ ++ ++ + + +VS G + W +K +
Sbjct: 156 NFEMI--LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNN-VKANKTAHKESIRD 212
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSR 500
+ F + + D T+K+WD+++
Sbjct: 213 LSFCKTDLKFCSCSDDTTVKVWDFTK 238
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
+VSG +D LV +W+ +S + L GH + VL
Sbjct: 283 LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVL 314
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH + +A+ D L S D +VW+L +G+ + +GH VF NF+P +
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 199 VSGSFDESVRIWDVRTGK 252
SG D RIWD+R K
Sbjct: 439 ASGGEDNQCRIWDLRMRK 456
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T GH ++ VA+ + + + S DKT ++W++++G L +GHS V+ F
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 187 SNLIVSGSFDESVRIWDVRTGK 252
L S D R+WD+RTG+
Sbjct: 393 GALAASCGLDSLARVWDLRTGR 414
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
HS V + F +DG+L S D L R+WD +G+ + + PV V FSPNG ++
Sbjct: 380 HSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI-LVFQGHIKPVFSVNFSPNGYHL 438
Query: 453 LAATLDNTLKLWD 491
+ DN ++WD
Sbjct: 439 ASGGEDNQCRIWD 451
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/79 (31%), Positives = 46/79 (58%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ HK +DV +S + +AS D+T K+W+ + G L+T +GH + + F+P
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 193 LIVSGSFDESVRIWDVRTG 249
+ + S+D++ R+WD+ TG
Sbjct: 353 YLGTTSYDKTWRLWDINTG 371
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-L 195
GH + V +S + + S +D ++W+L K L + H+N V + PQ
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 196 IVSGSFDESVRIWDVR 243
+ + S+D V IW R
Sbjct: 481 LATASYDMKVNIWSGR 496
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
P++ F+RDG ++ + S G+ ++W+ ++ D + V FSP + A
Sbjct: 257 PLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATA 316
Query: 462 TLDNTLKLW 488
+ D T KLW
Sbjct: 317 SADRTAKLW 325
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
+L+ H D ++ V F+ G + ++SYD R+WD +G L L + + V + F
Sbjct: 331 LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL-LLQEGHSRSVYGIAF 389
Query: 432 SPNGKYILAATLDNTLKLWDYSRGK 506
+G + LD+ ++WD G+
Sbjct: 390 QQDGALAASCGLDSLARVWDLRTGR 414
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLI 395
+C R+ L +PAH++ VS V + ++G + ++SYD IW +K+L
Sbjct: 446 QCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLA 505
Query: 396 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 497
++ V+ + + + I + D T+KLW S
Sbjct: 506 GHES-KVASLDITADSSCIATVSHDRTIKLWTSS 538
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
I H +S V + + + +AS D + +W +K+L GH + V + S
Sbjct: 461 IPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADS 520
Query: 190 NLIVSGSFDESVRIW 234
+ I + S D ++++W
Sbjct: 521 SCIATVSHDRTIKLW 535
Score = 33.9 bits (74), Expect = 0.14
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +3
Query: 402 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR-GKC*RHIRD--TRTKNIVSLPTLVSL 572
D+ P++ FS +GK + +L KLW+ + ++D R ++V P L
Sbjct: 254 DDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCL 313
Query: 573 AGSG*YRDQKTTWCTYGTFNQRRLYRGCLDTRIQFSARACHPTENIIASAALENDKTIQL 752
A + R K W T GT Q + G LD + + A HP+ + + + DKT +L
Sbjct: 314 ATASADRTAK-LWKTDGTLLQ--TFEGHLD---RLARVAFHPSGKYLGTTSY--DKTWRL 365
Query: 753 W 755
W
Sbjct: 366 W 366
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 123
K+++GH+ ++ + ++DS I + S D+T+K+W SSG
Sbjct: 502 KSLAGHESKVASLDITADSSCIATVSHDRTIKLW-TSSG 539
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNL 195
G ++ ++S D +++ + S K+WE+ + LK H F+P +
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 196 IVSGSFDESVRIW 234
+ + S D + ++W
Sbjct: 313 LATASADRTAKLW 325
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
+ + + GH + + NFS G + SG EDN IW+L+ ++ + + H + V
Sbjct: 414 RSILVFQGHIKPVFSV--NFS-PNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQ 470
Query: 683 TGLPPHRKHY 712
P ++
Sbjct: 471 VKYEPQEGYF 480
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 374
++K L H V+++ D S I + S+D ++W T+SG
Sbjct: 500 LVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW-TSSG 539
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDES 222
A+S+D R + S D T+K+ + +G CLK L GH + F+P S ++ SGS D
Sbjct: 113 AFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLE 172
Query: 223 VRIWDVRTGKC 255
VR+W+ T +C
Sbjct: 173 VRLWNTTTSEC 183
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 237 CENREMLKPLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLKTLIDDDNPP 413
CE LK L H V F+ S IV+S S D R+W+T + +C+++ + P
Sbjct: 135 CETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSECIRSHL--FYRP 192
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSR 500
++ + F G+ +LA + L +W Y+R
Sbjct: 193 IASIAFHAEGE-LLAVASGHKLHMWHYNR 220
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP- 183
T+ H I+D+ +S + ++S DKT++VW+ + G L+T GHS+ V +F+P
Sbjct: 688 TLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPI 747
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC*NHYR--RIQIQFQ 291
+ +LI S D +R W + G C Y+ QI+FQ
Sbjct: 748 KDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIRFQ 785
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 49 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 228
+SSD +++ SA DK +W + K TL+ H+ + F+P + + SFD++VR
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 229 IWD 237
+WD
Sbjct: 719 VWD 721
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFN 180
++ GH I+ V W + S S+D +KVW L S G+C+ L + N C F+
Sbjct: 813 SLQGHANPINSVCWDPSGDFLASVSEDM-VKVWTLGTGSEGECVHELSCNGNKFQSCVFH 871
Query: 181 PQ-SNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQLFISTETG 315
P +L+V G + +S+ +W++ K + L +ST TG
Sbjct: 872 PAYPSLLVIGCY-QSLELWNMSENKTMTLPAHEGLITSLAVSTATG 916
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/74 (25%), Positives = 43/74 (58%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
A + V+ HF+ DG ++ S+ +D +W T + + KT +++ ++ ++FSP+
Sbjct: 649 ASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKP-KTTLEEHTAMITDIRFSPSQLR 707
Query: 450 ILAATLDNTLKLWD 491
+ ++ D T+++WD
Sbjct: 708 LATSSFDKTVRVWD 721
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSP- 437
L H+ ++ + F+ + +SS+D R+WD + G L+T + + V+ + F P
Sbjct: 689 LEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSS-MVTSLDFHPI 747
Query: 438 NGKYILAATLDNTLKLWDYSRGKC*R 515
I + DN ++ W + G C R
Sbjct: 748 KDDLICSCDNDNEIRYWSINNGSCTR 773
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+T GH ++ + + LI S +D ++ W +++G C + KG S + F P
Sbjct: 730 RTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQI---RFQP 786
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
+ ++ S V + DV T
Sbjct: 787 RVGKYLAASSANLVNVLDVET 807
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
T+ H+ I+ +A S+ + L+ SAS DK +K+W+
Sbjct: 898 TLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 359
EN+ M LPAH ++++ + L+ S+S+D L ++W
Sbjct: 893 ENKTMT--LPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 61.7 bits (143), Expect = 6e-10
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLI 198
H I D++W +++AS D+T+KVW++ KC L GH+ V C+ S+L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 199 VSGSFDESVRIWDVR 243
VSGS D +WD+R
Sbjct: 187 VSGSRDGCFALWDLR 201
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN--GKYILAATLDNTLK 482
DG ++S S DG IW Q ++ + V+ V +SP+ GK + A+ D T++
Sbjct: 349 DGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGK-VATASDDFTVR 407
Query: 483 LWDYSRGKC 509
LW+ C
Sbjct: 408 LWNIENNIC 416
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 13 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKC 129
+ GH ++ V WS S+ + +ASDD T+++W + + C
Sbjct: 377 LKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNIC 416
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
H N +F ++ + +++ S D+++++WDV KC
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKC 162
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 497 QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
++ + + H N IF + G +++ S D + +W+++ + L GHT TV
Sbjct: 117 EKARFRDWIAHYN---AIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTV 173
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ-RLSGHTDTVLCT 685
+++++G + + + + S G++++SGS D YIW + ++ L GH V
Sbjct: 329 VQSFSGCRIDSFFVRTMIS-PDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAV 387
Query: 686 GLPP 697
P
Sbjct: 388 DWSP 391
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 61.7 bits (143), Expect = 6e-10
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
N + LP H D VS + F+ DG L+ S DG+ +I+D +SG LK ++D + +
Sbjct: 102 NGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSG-TLKCVLDGPGAGIEW 160
Query: 423 VKFSPNGKYILAATLDNTLKLWD 491
V++ P G +LA + D +L +W+
Sbjct: 161 VRWHPRGHIVLAGSEDCSLWMWN 183
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY---VFCCNFNPQ 186
SGH + ++ ++ D +LI + SDD +L VW + + + +KGH + + C + N
Sbjct: 194 SGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSN 253
Query: 187 SNLIVSGSFDESVRIWDVRTGK 252
S+L +SGS D SV I ++ TGK
Sbjct: 254 SSLAISGSKDGSVHIVNIVTGK 275
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ G GI V W ++++ S+D +L +W L GH+ V C +F P
Sbjct: 151 LDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGK 210
Query: 193 LIVSGSFDESVRIWDVRT 246
LI +GS D S+ +W+ +T
Sbjct: 211 LICTGSDDASLIVWNPKT 228
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
T +GHK + +A S +D+ L+ + D +W++ +G L GH + V C F+
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 187 SNLIVSGSFDESVRIWDVRTG--KC 255
L+ SG D V+I+D +G KC
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKC 149
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +3
Query: 237 CENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
CE+ ++K P H++ ++ + N + SL +S S DG I + +G+ + +L + V
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL-NSHTDSV 287
Query: 417 SFVKFSPNGKYI-LAAT--LDNTLKLWD 491
VKFSP+ I LAAT +D L +WD
Sbjct: 288 ECVKFSPSSATIPLAATGGMDKKLIIWD 315
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/75 (25%), Positives = 40/75 (53%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
I H+ G++ + W S+ + + + T+ +W+ G C+ T GH + V + + ++
Sbjct: 324 ICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTD 383
Query: 193 LIVSGSFDESVRIWD 237
IVS S D + R+++
Sbjct: 384 FIVSVSVDNTARVFE 398
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS---N 192
H G++ + +S+S L +S S D ++ + + +GK + +L H++ V C F+P S
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 193 LIVSGSFDESVRIWDVR 243
L +G D+ + IWD++
Sbjct: 301 LAATGGMDKKLIIWDLQ 317
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/75 (28%), Positives = 44/75 (58%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GHK +S +A+S D +L+ S D +++++ SSG L G + ++P+ +
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 193 LIVSGSFDESVRIWD 237
++++GS D S+ +W+
Sbjct: 169 IVLAGSEDCSLWMWN 183
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 515 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
T+TGHK E Y + S T + +G D+ ++W + + + L GH D+V C
Sbjct: 65 TFTGHKGELYALAC--SPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSC 118
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 587 VSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
+SGS+D V+I N+ + ++V L+ HTD+V C P
Sbjct: 258 ISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSP 294
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H + V+++ + + + +G IWD+ G C+ T V + S N +I
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHT-YHGHQDAVQAISVSTNTDFI 385
Query: 453 LAATLDNTLKLWDYS 497
++ ++DNT ++++ S
Sbjct: 386 VSVSVDNTARVFESS 400
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRK 706
G +++GSED +++WN + + SGH V C P K
Sbjct: 167 GHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGK 210
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR---IWDTASGQCLKTLIDDDNPPVS 419
+++ L +H+D V V F+ + I ++ G+ + IWD I + V+
Sbjct: 275 KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST--PRFICEHEEGVT 332
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
+ + KY+ + T+ +WD G C
Sbjct: 333 SLTWIGTSKYLATGCANGTVSIWDSLLGNC 362
Score = 31.9 bits (69), Expect = 0.58
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 180
+++ H + V +S S I A+ DK L +W+L + + H V +
Sbjct: 279 SLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTSLTWI 337
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQ-LFISTET 312
S + +G + +V IWD G C + Y Q Q + +ST T
Sbjct: 338 GTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNT 382
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
L ++GH C +F+ GK I +GS+D + +WN ++ E + + GH
Sbjct: 190 LNMFSGHNLNVTC--GDFT-PDGKLICTGSDDASLIVWNPKTCESIHIVKGH 238
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 VHFNRDGSLIVSSSYDGLCRIWD-TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 470
V ++ G ++++ S D C +W A + + N V+ F+P+GK I + D
Sbjct: 161 VRWHPRGHIVLAGSED--CSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDD 218
Query: 471 NTLKLWD 491
+L +W+
Sbjct: 219 ASLIVWN 225
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 117
T GH+ + ++ S+++ IVS S D T +V+E S
Sbjct: 365 TYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESS 400
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 61.3 bits (142), Expect = 8e-10
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 196 IVSGSFDESVRIW 234
+SGS D VRIW
Sbjct: 412 FISGSIDGKVRIW 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
+H++ V++V FN D +S S DG RIW ++ QC D V+ V + P+G+
Sbjct: 394 SHNNYVTSVQFNPVDDDHFISGSIDGKVRIW--SASQCQVVDWADARGIVTAVCYQPDGQ 451
Query: 447 YILAATLDNTLKLWDYSRGKC 509
++ TL + + ++ S G C
Sbjct: 452 AVIIGTLTSDCRFYNVS-GHC 471
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 449
HS + + ++++ L+ S+S D R+W CL I N V+ V+F+P + +
Sbjct: 355 HSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLG--IFSHNNYVTSVQFNPVDDDH 411
Query: 450 ILAATLDNTLKLWDYSR 500
++ ++D +++W S+
Sbjct: 412 FISGSIDGKVRIWSASQ 428
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 500 RKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
R ++ Y G +N I A+F+ G K IVS +D+ VY+WN
Sbjct: 523 RNVVHKYKGSRNAGNQISASFTADG-KHIVSACDDSSVYVWN 563
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 377
+ AH + A+ F+ DG + S+ DG+ R+W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 423 VKFSPNGKYILAATLDNTLKLW 488
+KFSP+G+Y+ +A D L++W
Sbjct: 257 MKFSPDGRYLASAGEDGVLRVW 278
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 124 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
K L GHS + +++ ++N ++S S D SVR+W + C
Sbjct: 347 KPLHEFLGHSGDILDISWS-KNNRLLSASVDNSVRLWQIGCEDC 389
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 61.3 bits (142), Expect = 8e-10
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 196 IVSGSFDESVRIW 234
+SGS D VRIW
Sbjct: 412 FISGSIDGKVRIW 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
+H++ V++V FN D +S S DG RIW ++ QC D V+ V + P+G+
Sbjct: 394 SHNNYVTSVQFNPVDDDHFISGSIDGKVRIW--SASQCQVVDWADARGIVTAVCYQPDGQ 451
Query: 447 YILAATLDNTLKLWDYSRGKC 509
++ TL + + ++ S G C
Sbjct: 452 AVIIGTLTSDCRFYNVS-GHC 471
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 449
HS + + ++++ L+ S+S D R+W CL I N V+ V+F+P + +
Sbjct: 355 HSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLG--IFSHNNYVTSVQFNPVDDDH 411
Query: 450 ILAATLDNTLKLWDYSR 500
++ ++D +++W S+
Sbjct: 412 FISGSIDGKVRIWSASQ 428
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 500 RKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
R ++ Y G +N I A+F+ G K IVS +D+ VY+WN
Sbjct: 519 RNVVHKYKGSRNAGNQISASFTADG-KHIVSACDDSSVYVWN 559
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 377
+ AH + A+ F+ DG + S+ DG+ R+W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 423 VKFSPNGKYILAATLDNTLKLW 488
+KFSP+G+Y+ +A D L++W
Sbjct: 257 MKFSPDGRYLASAGEDGVLRVW 278
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 124 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
K L GHS + +++ ++N ++S S D SVR+W + C
Sbjct: 347 KPLHEFLGHSGDILDISWS-KNNRLLSASVDNSVRLWQIGCEDC 389
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH + D+ WS D ++ S S D T+ +W + +G C L+GH + V ++P
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 190 NLIVSGSFDESVRIW 234
+ I S S D++V IW
Sbjct: 173 SFIASQSDDKTVIIW 187
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-----------------KCLKT 138
T+ H ++ V W+ +SR + S SDD+ +++ E G K + T
Sbjct: 54 TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 113
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L+GH+ V N++P +++ SGS D +V IW++RTG C
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC 152
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
EN + + L H+ V ++++ D S++ S S D IW+ +G C T++ V
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC-TTVLRGHLSLVK 164
Query: 420 FVKFSPNGKYILAATLDNTLKLW 488
V + P G +I + + D T+ +W
Sbjct: 165 GVTWDPIGSFIASQSDDKTVIIW 187
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 150
+ GH + V W I S SDDKT+ +W S GH
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
K + T GH + + N+S + SGS DN V+IWN+++ L GH V
Sbjct: 109 KAVMTLRGHTAD--VVDLNWS-PDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSRGKC 509
+ +SP+ + + +LDNT+ +W+ G C
Sbjct: 124 LNWSPDDSMLASGSLDNTVHIWNMRTGMC 152
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 195
GH+ I+D+A SS++ L+ SAS+D ++VW L G + L+GH+ V F+P Q+++
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASV 404
Query: 196 --IVSGSFDESVRIWDVR 243
++S S D + RIWD R
Sbjct: 405 YQLLSSSDDGTCRIWDAR 422
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/81 (24%), Positives = 41/81 (50%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K + GH+ + + R +++ SDD+ +K+W + + CL + +GH + +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
+ L+ S S D +R+W + G
Sbjct: 359 NALVASASNDFVIRVWRLPDG 379
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 31 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 207
G++ + WS D+R +++A D + VW + G + L GHS + + +P + +S
Sbjct: 599 GVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSA 658
Query: 208 SFDESVRIWDVRTG 249
+D IWD+ G
Sbjct: 659 GYDGKTIIWDIWEG 672
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
+K L+GH N V+C F+ +++GS D V+IW + T C
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALC 339
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
+K GH+N YC + S G+++++GS+D LV IW++++ + GH
Sbjct: 298 IKKLRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETALCLASCRGH 346
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+ + +K L H + V F+R G +++ S D L +IW + CL + + ++
Sbjct: 293 QKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEG-DIT 351
Query: 420 FVKFSPNGKYILAATLDNTLKLW 488
+ S N + +A+ D +++W
Sbjct: 352 DLAVSSNNALVASASNDFVIRVW 374
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLI---VSASDDKTLKVWELSSGKCLKTL-------------- 141
+ GH ++ +A+S + +S+SDD T ++W+ + L +
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTS 444
Query: 142 -KGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
S+ + CC +N + V+GS D + R+W
Sbjct: 445 NASQSHQILCCAYNANGTIFVTGSSDSNARVW 476
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 264 LPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRIWDTASGQCL 383
L H+ V+A+ F+ R S+ ++SSS DG CRIWD Q L
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWL 427
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP- 183
K++ G I D+A + D++ +++A+ L VW++SSG+ TL GH++ V + +
Sbjct: 267 KSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKF 326
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC*N 261
S +VS ++D ++++WD+ G C N
Sbjct: 327 SSRHVVSAAYDRTIKLWDLHKGYCTN 352
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
T++GH + V S SR +VSA+ D+T+K+W+L G C T+ SN C +
Sbjct: 310 TLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC-LSID 368
Query: 187 SNLIVSGSFDESVRIWDVRTGK 252
+ SG D ++R+WD++TGK
Sbjct: 369 GLTVFSGHMDGNLRLWDIQTGK 390
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
++L + HS V++V +R+G+ I++S D + ++DT + + TL N S
Sbjct: 390 KLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWS 449
Query: 429 ---FSPNGKYILAATLDNTLKLWDYSRG 503
SP+ Y+ A + D ++ +W S+G
Sbjct: 450 RSCISPDDDYVAAGSADGSVHVWSLSKG 477
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILA 458
++ H N+ S+I ++S + L +WD +SG+ TL D V KFS +++++
Sbjct: 279 MAVTHDNK--SVIAATSSNNLF-VWDVSSGRVRHTLTGHTDKVCAVDVSKFS--SRHVVS 333
Query: 459 ATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
A D T+KLWD +G C + T N + L
Sbjct: 334 AAYDRTIKLWDLHKGYCTNTVLFTSNCNAICL 365
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
AH ++ F + + + D ++WDT SG +K+L + N K
Sbjct: 229 AHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN-KS 287
Query: 450 ILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
++AAT N L +WD S G+ RH T + ++
Sbjct: 288 VIAATSSNNLFVWDVSSGRV-RHTLTGHTDKVCAV 321
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 222
+ S D + S D L++W++ +GK L + GHS+ V + + N I++ D
Sbjct: 363 ICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNV 422
Query: 223 VRIWDVRT 246
++D RT
Sbjct: 423 HNVFDTRT 430
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
S D + + S D ++ VW LS G + LK ++ + CC+++ + S + V
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 513
Query: 232 W 234
W
Sbjct: 514 W 514
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 581 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
++ +GS D V++W+L IV L T +LC
Sbjct: 459 YVAAGSADGSVHVWSLSKGNIVSILKEQTSPILC 492
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 578 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
K +++ + N +++W++ S + L+GHTD V
Sbjct: 286 KSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKV 318
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
G + SG D + +W++Q+ +++ ++GH+ V L
Sbjct: 369 GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSL 407
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/77 (29%), Positives = 49/77 (63%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH+ ++D+ + + +VS+S DK L+VW+L + C++ + GH + V+ + +P+
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 193 LIVSGSFDESVRIWDVR 243
+V+GS D+ +R + V+
Sbjct: 204 YVVTGSADQELRFYAVK 220
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 180
F ++ GHK+ + + SSD LIV+ S DK LK+W L G C K++ H + V F
Sbjct: 574 FYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFV 633
Query: 181 PQSNLIVSGSFDESVRIWD 237
++ + S D V+ WD
Sbjct: 634 RNTHYLFSIGKDRLVKYWD 652
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 222
VA S D++ I A D T+KV+ + S K +L GH V C + + LIV+GS D++
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 223 VRIWDVRTGKC 255
++IW + G C
Sbjct: 606 LKIWGLDFGDC 616
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K+I H + V + ++ + S D+ +K W+ + L TL+GH ++C + +
Sbjct: 618 KSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNR 677
Query: 187 SNLIVSGSFDESVRIWD 237
+ +V+GS D S+R WD
Sbjct: 678 GDFLVTGSHDRSMRRWD 694
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
G + ++ +A SS S L+ D ++++W+ G C H V +N +++
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 199 VSGSFDESVRIWDV 240
SGS D + +WDV
Sbjct: 122 ASGSKDNDIILWDV 135
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H PV + + DG LIV+ S D +IW G C K++ + V VKF N
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGD-SVMGVKFVRNT 636
Query: 444 KYILAATLDNTLKLWD 491
Y+ + D +K WD
Sbjct: 637 HYLFSIGKDRLVKYWD 652
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
E + HK ++ + ++ ++ S S D + +W++ L L+GH + V F
Sbjct: 99 EVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLD 158
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC 255
+VS S D+ +R+WD+ T C
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHC 182
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ + V S D+ L++S S + +K+W S+G CL+T+ S Y C PQ+
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTI--DSGYGLCSLIVPQNKYG 460
Query: 199 VSGSFDESVRIWDV 240
+ G+ + I D+
Sbjct: 461 IVGTKSGVLEIIDI 474
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H D V+ + F G +VSSS D R+WD + C++ ++ + V V P
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQ-IVSGHHSEVWSVDTDPEE 202
Query: 444 KYILAATLDNTLKLW 488
+Y++ + D L+ +
Sbjct: 203 RYVVTGSADQELRFY 217
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
+H V+A+ +N+ GS++ S S D +WD G+ + V+ + F GK
Sbjct: 104 SHKGAVTALRYNKVGSMLASGSKDNDIILWDVV-GESGLFRLRGHRDQVTDLVFLDGGKK 162
Query: 450 ILAATLDNTLKLWDYSRGKC 509
+++++ D L++WD C
Sbjct: 163 LVSSSKDKFLRVWDLETQHC 182
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 37 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-----KGHSNYVFCCNFNPQSNLIV 201
S++A+ S + +++ + +K + +W + G C KTL +G + + S+L+
Sbjct: 22 SNIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVA 80
Query: 202 SGSFDESVRIWDVRTGKC 255
G D S+RIWD G C
Sbjct: 81 VGYADGSIRIWDTEKGTC 98
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 255 LKPLPAHSDPVSAV-HFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
L P + P AV S +V+ Y DG RIWDT G C + + V+ ++
Sbjct: 55 LTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTC-EVNFNSHKGAVTALR 113
Query: 429 FSPNGKYILAATLDNTLKLWD 491
++ G + + + DN + LWD
Sbjct: 114 YNKVGSMLASGSKDNDIILWD 134
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
K + AH D V V F R+ + S D L + WD + L TL + + + + S
Sbjct: 618 KSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTL-EGHHAEIWCLAISN 676
Query: 438 NGKYILAATLDNTLKLWDYS 497
G +++ + D +++ WD S
Sbjct: 677 RGDFLVTGSHDRSMRRWDRS 696
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 572 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKH 709
GGK +VS S+D + +W+L+++ +Q +SGH V P ++
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERY 204
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H V +V + D +L++S+S+ + +IW+ ++G CL+T ID S + P KY
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTSHSEV-KIWNPSTGSCLRT-IDSGYGLCSLI--VPQNKYG 460
Query: 453 LAATLDNTLKLWD 491
+ T L++ D
Sbjct: 461 IVGTKSGVLEIID 473
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
G + SGS+DN + +W++ + + RL GH D V
Sbjct: 118 GSMLASGSKDNDIILWDVVGESGLFRLRGHRDQV 151
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN---PPVSFVKFSPNGKYILA 458
S + ++ G +++ + + + IW G C KTL + P ++ + + ++A
Sbjct: 22 SNIAYDSTGKYVLAPALEKV-GIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVA 80
Query: 459 ATL-DNTLKLWDYSRGKC 509
D ++++WD +G C
Sbjct: 81 VGYADGSIRIWDTEKGTC 98
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
GHK CI + + G+ IV+GS+D + IW L + + + H D+V+
Sbjct: 580 GHKLPVMCIDIS---SDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVM 628
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +3
Query: 276 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 455
+D V AV + D I + D +++ S + +L PV + S +G+ I+
Sbjct: 540 NDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGH-KLPVMCIDISSDGELIV 598
Query: 456 AATLDNTLKLWDYSRGKC*RHI 521
+ D LK+W G C + I
Sbjct: 599 TGSQDKNLKIWGLDFGDCHKSI 620
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +1
Query: 85 DDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
++ +L+ + L S + KT+ +GH + V + + L++S S E V+IW+ TG
Sbjct: 380 NNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGS 438
Query: 253 C 255
C
Sbjct: 439 C 439
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
+ SAS D T+K+W+ GK L + GH V+ F+P I SGS D+S+ IW ++ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 250 K 252
K
Sbjct: 574 K 574
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--- 177
KT +GH+ ++ V W L+ S SDD T K+W + + L+ H+ ++ +
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPT 501
Query: 178 -----NPQSNL-IVSGSFDESVRIWDVRTGK 252
NP L + S SFD +V++WD GK
Sbjct: 502 GPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = +3
Query: 276 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 455
S V+ + +N +G+L+ + S DG RIW T +G+ + TL P S +K++ G Y+L
Sbjct: 324 SKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFS-LKWNKKGDYLL 381
Query: 456 AATLDNTLKLWD 491
++D T +WD
Sbjct: 382 TGSVDRTAVVWD 393
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+ S+S+D ++WD G+ L + + PV + FSPNG+YI + +LD ++ +W
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSF-NGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
Query: 501 GK 506
GK
Sbjct: 573 GK 574
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/70 (25%), Positives = 40/70 (57%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
++ + W+ + L+ + S D ++W L +G+ + TL H +F +N + + +++GS
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 214 DESVRIWDVR 243
D + +WDV+
Sbjct: 386 DRTAVVWDVK 395
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
+ +GH+ + +A+S + I S S DK++ +W + GK +KT G+ C +N +
Sbjct: 536 SFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVC-WNKEG 594
Query: 190 NLIVSGSFDESVRIWDVR 243
N I + D SV + D R
Sbjct: 595 NKIAACFADNSVCVLDFR 612
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 17/93 (18%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-------------CLKTLKG 147
+ + GH + AWS + L+ S S D T ++W + G LK KG
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKG 318
Query: 148 HSNY----VFCCNFNPQSNLIVSGSFDESVRIW 234
SN V ++N + L+ +GS D RIW
Sbjct: 319 KSNEKSKDVTTLDWNGEGTLLATGSCDGQARIW 351
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 40 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 219
DV W ++ S S D + + ++ + KT GH V C ++P +L+ S S D
Sbjct: 412 DVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDS 470
Query: 220 SVRIWDVR 243
+ +IW+++
Sbjct: 471 TAKIWNIK 478
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
++ L+GH++ V C ++P ++L+ SGS D + RIW + G
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEG 297
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
K H V+ V ++ GSL+ S S D +IW+ + L + + +++SP
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL-REHTKEIYTIRWSP 500
Query: 438 NGK---------YILAATLDNTLKLWDYSRGK 506
G + +A+ D+T+KLWD GK
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ML H +PV ++ F+ +G I S S D IW G+ +KT N + V
Sbjct: 532 KMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTY--TGNGGIFEVC 589
Query: 429 FSPNGKYILAATLDNTLKLWDY 494
++ G I A DN++ + D+
Sbjct: 590 WNKEGNKIAACFADNSVCVLDF 611
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
KML ++ GH+ Y + FS G++I SGS D ++IW+++ +IV+ +G+
Sbjct: 532 KMLCSFNGHREPVYSLA--FS-PNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
KT+TGH+ E C+ + TG + S S+D+ IWN++ V L HT +
Sbjct: 442 KTFTGHQGEVNCV--KWDPTGSL-LASCSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Score = 36.3 bits (80), Expect = 0.027
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 15/186 (8%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSS--SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
HS P V + + S SS S LC+I +T KT V+ VK+ P G
Sbjct: 406 HSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPA---KTFTGHQGE-VNCVKWDPTGS 461
Query: 447 YILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSLPTLVSLAGSG*YRDQKTTWCTYGT 626
+ + + D+T K+W+ + +R+ TK I ++ S G G K +
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLRE-HTKEIYTIRW--SPTGPGTNNPNKQLTLASAS 518
Query: 627 FNQR-RLYRGCLDTRI-QFSAR-------ACHPTENIIASAALENDKTIQLWK----SVL 767
F+ +L+ L + F+ A P IAS +L DK+I +W ++
Sbjct: 519 FDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL--DKSIHIWSIKEGKIV 576
Query: 768 KNYFGN 785
K Y GN
Sbjct: 577 KTYTGN 582
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 153
T+S HK I + W+ +++ S D+T VW++ + + + + HS
Sbjct: 360 TLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS 407
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 58.4 bits (135), Expect = 6e-09
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ 186
T H ++D A + +S L VS S D T+K W+ LS G C +TL+ HS+YV C +
Sbjct: 79 TFESHVDWVNDAALAGESTL-VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAK 137
Query: 187 -SNLIVSGSFDESVRIWDV 240
+N++ SG V IWD+
Sbjct: 138 NNNVVASGGLGGEVFIWDI 156
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 199 VSGSFDESVRIWDVRTGKC*NHY 267
+SGS D +R+WD+ +C + Y
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTY 293
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH + + S R +S S D +++W+L +CL T H++ V+ NP +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 193 LIVSGSFDESVRIWDVRT 246
+ SG D+ + + D+ T
Sbjct: 311 HVYSGGRDQCLYLTDLAT 328
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 142 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
KGH V+ N ++VSG ++ +R+WD RTG
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTG 245
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFG 721
G++ +SGS D+++ +W+L + + + HTD+V P H G
Sbjct: 267 GRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSG 315
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
GHK Y + N + G +VSG + ++ +W+ ++ +L GHTD V
Sbjct: 211 GHKESVYALAMNDT---GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFSPN 440
L H+D V + + G +S S D + R+WD +CL T + D+ V + +P+
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDS--VWALACNPS 308
Query: 441 GKYILAATLDNTLKLWD 491
++ + D L L D
Sbjct: 309 FSHVYSGGRDQCLYLTD 325
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 58.4 bits (135), Expect = 6e-09
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ 186
T H ++D A + +S L VS S D T+K W+ LS G C +TL+ HS+YV C +
Sbjct: 79 TFESHVDWVNDAALAGESTL-VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAK 137
Query: 187 -SNLIVSGSFDESVRIWDV 240
+N++ SG V IWD+
Sbjct: 138 NNNVVASGGLGGEVFIWDI 156
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 199 VSGSFDESVRIWDVRTGKC*NHY 267
+SGS D +R+WD+ +C + Y
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTY 293
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH + + S R +S S D +++W+L +CL T H++ V+ NP +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 193 LIVSGSFDESVRIWDVRT 246
+ SG D+ + + D+ T
Sbjct: 311 HVYSGGRDQCLYLTDLAT 328
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 142 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
KGH V+ N ++VSG ++ +R+WD RTG
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTG 245
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFG 721
G++ +SGS D+++ +W+L + + + HTD+V P H G
Sbjct: 267 GRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSG 315
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
GHK Y + N + G +VSG + ++ +W+ ++ +L GHTD V
Sbjct: 211 GHKESVYALAMNDT---GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFSPN 440
L H+D V + + G +S S D + R+WD +CL T + D+ V + +P+
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDS--VWALACNPS 308
Query: 441 GKYILAATLDNTLKLWD 491
++ + D L L D
Sbjct: 309 FSHVYSGGRDQCLYLTD 325
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAW-SSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP 183
T SGH G+S + + L++SA D +K+W++ +SGKC++T GH+ V F+
Sbjct: 277 TWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSN 336
Query: 184 QSNLIVSGSFDESVRIWDVRTGK 252
+ ++ +D++++ WD TG+
Sbjct: 337 DGSKFLTAGYDKNIKYWDTETGQ 359
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN-FN 180
+T GH + D+ +S+D ++A DK +K W+ +G+ + T G YV N +
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC*NHY 267
+ N++++G D+ + WD+ TG+ Y
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGEVTQEY 408
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG--- 443
H+ V + F+ DGS +++ YD + WDT +GQ + T P V VK +P+
Sbjct: 325 HAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYV--VKLNPDDDKQ 382
Query: 444 KYILAATLDNTLKLWDYSRGK 506
+LA D + WD + G+
Sbjct: 383 NILLAGMSDKKIVQWDINTGE 403
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 198
H ++ + + ++R V++SDDK+L+VWE +K + + H + + + +P N +
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 199 VSGSFDESVRIWDVR 243
+ S D + I+ R
Sbjct: 471 AAQSLDNQILIYSTR 485
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
E+ + H V+ + F + V+SS D R+W+ +K + + + +
Sbjct: 403 EVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 462
Query: 429 FSPNGKYILAATLDNTLKLW 488
PNG ++ A +LDN + ++
Sbjct: 463 VHPNGNWLAAQSLDNQILIY 482
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +1
Query: 4 EKTISGHKMG--ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
+K +GH + V +S D R ++S + W+ S K +TLK H+ +
Sbjct: 493 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEW 552
Query: 178 NP-QSNLIVSGSFDESVRIWD 237
+P + + + + +D ++ WD
Sbjct: 553 HPLEQSKVATCGWDGLIKYWD 573
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +3
Query: 294 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 473
V+F+ DG ++S +G C WD S + +TL + + + D
Sbjct: 508 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDG 567
Query: 474 TLKLWD 491
+K WD
Sbjct: 568 LIKYWD 573
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-- 192
GH+ I+D+A SS++ I SAS+D ++VW L G + L+GH+ V F+P+
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 193 -LIVSGSFDESVRIWDVR 243
++S S D + RIWD R
Sbjct: 345 YQLLSSSDDGTCRIWDAR 362
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 31 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCN-FNPQSNLIV 201
G++ +AWS D+R +++A D + VW S G + +L GH S YV + FNP+ + +
Sbjct: 546 GVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPR--IAM 603
Query: 202 SGSFDESVRIWDVRTG 249
S +D +WD+ G
Sbjct: 604 SAGYDGKTIVWDIWEG 619
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K + GH+ + R +++ SDD+ +KVW + + CL + +GH + +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
+ I S S D +R+W + G
Sbjct: 299 NIFIASASNDCVIRVWRLPDG 319
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 509 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
+K GH+N YC + S G+++++GS+D LV +W++ + + GH
Sbjct: 238 IKRLRGHRNAVYCAILDRS---GRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
+K L+GH N V+C + +++GS D V++W + T C
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYC 279
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+ + +K L H + V +R G +++ S D L ++W + CL + + ++
Sbjct: 233 QKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEG-DIT 291
Query: 420 FVKFSPNGKYILAATLDNTLKLW 488
+ S N +I +A+ D +++W
Sbjct: 292 DLAVSSNNIFIASASNDCVIRVW 314
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 264 LPAHSDPVSAVHFN-RDGS--LIVSSSYDGLCRIWDTASGQ 377
L H+ V+A+ F+ R GS ++SSS DG CRIWD Q
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQ 365
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 151 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
S+ +FCC FN ++ V+GS D R++ V
Sbjct: 393 SHQIFCCAFNASGSVFVTGSSDTLARVYSV 422
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +2
Query: 518 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
++GH+ KY I + F +I SGSED+ VYIWNL++ + ++ LSGH+ TV C P
Sbjct: 436 FSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNP 495
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 16 SGHKMG---ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
SGH+ I DS I S S+D + +W L + K L+ L GHS V C ++NP+
Sbjct: 437 SGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPK 496
Query: 187 S-NLIVSGSFDESVRIW 234
+ ++ S S D+++RIW
Sbjct: 497 NPRMLASASDDQTIRIW 513
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSF 422
E ++ L AH + V V F+ G + ++S D IW LK ++ PVSF
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSF 274
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSRG 503
V +SP+ +L LKLWD G
Sbjct: 275 VSWSPDDTKLLTCGNAEVLKLWDVDTG 301
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF---CCNFN 180
T+ H+ +S V+WS D +++ + + LK+W++ +G L+ G++N F C +
Sbjct: 264 TLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTG-VLRHTFGNNNTGFTVSSCAWF 322
Query: 181 PQSNLIVSGSFD--ESVRIWD 237
P S +V GS D + +WD
Sbjct: 323 PDSTRLVCGSSDPERGIVMWD 343
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKC-LK-TLKGHSNYVFCCNFNPQSN 192
HK + V +S+ + + +AS D T +W+ L K LK TL+ H N V +++P
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 193 LIVSGSFDESVRIWDVRTG 249
+++ E +++WDV TG
Sbjct: 283 KLLTCGNAEVLKLWDVDTG 301
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/35 (40%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVW 108
+ +SGH M ++ V+W+ + R++ SASDD+T+++W
Sbjct: 479 EVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK--GH--SNYVF-C 168
E+ IS + I+ ++ S D + + + + +W+L+ G+ + LK GH S YV
Sbjct: 391 ERVIS-EEQPITSLSISGDGKFFIVNLSCQEIHLWDLA-GEWKQPLKFSGHRQSKYVIRS 448
Query: 169 CNFNPQSNLIVSGSFDESVRIWDVRTGK 252
C S+ I SGS D V IW+++ K
Sbjct: 449 CFGGLDSSFIASGSEDSQVYIWNLKNTK 476
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRL-IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+T+ H V + +L +VS DD +K W+++ + L GH +YV C + +P
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 184 -QSNLIVSGSFDESVRIWDVR 243
+++V+GS+D +V++WD R
Sbjct: 189 VNDSMLVTGSYDHTVKVWDAR 209
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +2
Query: 446 IYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
++ D+ Q+ + +R L+T H F + V +VSG +D +V W+
Sbjct: 107 LFAACDLSGVVQVFDIKERMALRTLRSHSAPAR--FVKYPVQDKLHLVSGGDDGVVKYWD 164
Query: 626 LQSKEIVQRLSGHTDTVLCTGLPP 697
+ ++ L GH D V C P
Sbjct: 165 VAGATVISDLLGHKDYVRCGDCSP 188
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
+ R L+ L +HS P V + L +VS DG+ + WD A + L+ + V
Sbjct: 123 KERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKD-YV 181
Query: 417 SFVKFSP-NGKYILAATLDNTLKLWD 491
SP N ++ + D+T+K+WD
Sbjct: 182 RCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +3
Query: 315 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 494
S++V+ SYD ++WD + PV V + P+G ++A N++K+WD
Sbjct: 192 SMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGG-LIATAGGNSVKVWDL 250
Query: 495 SRGKC*RHIRDTRTKNIVSL 554
G ++ K + SL
Sbjct: 251 IGGGKMVCSMESHNKTVTSL 270
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
I+ ++ S + +A+ D W++ SGK T KGHS+Y+ ++ I++GS
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 214 DESVRIWDVRTGKC 255
D + RIWD +TGKC
Sbjct: 222 DGTARIWDCKTGKC 235
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-- 413
E+ ++ HSD + V S I++ S DG RIWD +G+C+K + D
Sbjct: 189 ESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRL 248
Query: 414 -VSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
VS + + +++ N L LW+ +C
Sbjct: 249 RVSSMALDGSESWLVCGQGKN-LALWNLPASEC 280
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
T GH + V S + I++ S+D T ++W+ +GKC+K +
Sbjct: 196 TFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVI 239
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 195
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 673 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 731
Query: 196 IVSGSFDESVRIWDVRTGKC 255
+V G + +++ +W+ KC
Sbjct: 732 LVIGGY-QAIELWNTMENKC 750
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFN 180
E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+ V +F+
Sbjct: 543 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFH 602
Query: 181 P-QSNLIVSGSFDESVRIWDV 240
P ++ L+ S + +R WD+
Sbjct: 603 PKKTELLCSCDSNNDIRFWDI 623
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 226 RIWD 237
+IWD
Sbjct: 575 KIWD 578
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
R G + ++S + I+D + + + V V +SPNG+ ++A+ ++ +KL
Sbjct: 643 RTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKL 700
Query: 486 WDYSRGKC*RHIRDTRTK--NIVSLPTLVSLAGSG*YRDQKTTWCTYGTFNQRRLYRGCL 659
W S G C + ++ K ++V P+ L G Y+ + W T C+
Sbjct: 701 WSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE-LWNTMENKCMTVAGHECV 759
Query: 660 DTRIQFSARACHPTENIIASAALENDKTIQLWK 758
SA A P+ ++ASA+ +DK++++WK
Sbjct: 760 -----ISALAQSPSTGVVASAS--HDKSVKIWK 785
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 480 KLWDYS 497
K+WD S
Sbjct: 575 KIWDAS 580
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY 449
H+ ++ V F + + + +SS+D +IWD + G L+T I PV + F P
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDFHPKKTE 607
Query: 450 IL-AATLDNTLKLWDYSRGKC*RHIRDTRTK 539
+L + +N ++ WD + C R ++ T+
Sbjct: 608 LLCSCDSNNDIRFWDIN-ASCVRAVKGASTQ 637
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 91 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 738 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 752 TVAGHECVISALAQSPSTGVVASASHDKSVKIWK 785
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ + H+ PV ++ F+ + L+ S + R WD + C++ + V+F
Sbjct: 586 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQ----VRF 640
Query: 432 SPNGKYILAATLDNTLKLWD 491
P LAA +NT+ ++D
Sbjct: 641 QPRTGQFLAAASENTVSIFD 660
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T
Sbjct: 486 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMET 539
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 195
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 196 IVSGSFDESVRIWDVRTGKC 255
+V G + +++ +W+ KC
Sbjct: 734 LVIGGY-QAIELWNTMENKC 752
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFN 180
E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+ V +F+
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFH 604
Query: 181 P-QSNLIVSGSFDESVRIWDV 240
P ++ L+ S + +R WD+
Sbjct: 605 PKKTELLCSCDSNNDIRFWDI 625
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 226 RIWD 237
+IWD
Sbjct: 577 KIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
R G + ++S + I+D + + + V V +SPNG+ ++A+ ++ +KL
Sbjct: 645 RTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKL 702
Query: 486 WDYSRGKC*RHIRDTRTK--NIVSLPTLVSLAGSG*YRDQKTTWCTYGTFNQRRLYRGCL 659
W S G C + ++ K ++V P+ L G Y+ + W T C+
Sbjct: 703 WSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE-LWNTMENKCMTVAGHECV 761
Query: 660 DTRIQFSARACHPTENIIASAALENDKTIQLWK 758
SA A P+ ++ASA+ +DK++++WK
Sbjct: 762 -----ISALAQSPSTGVVASAS--HDKSVKIWK 787
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 480 KLWDYS 497
K+WD S
Sbjct: 577 KIWDAS 582
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY 449
H+ ++ V F + + + +SS+D +IWD + G L+T I PV + F P
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDFHPKKTE 609
Query: 450 IL-AATLDNTLKLWDYSRGKC*RHIRDTRTK 539
+L + +N ++ WD + C R ++ T+
Sbjct: 610 LLCSCDSNNDIRFWDIN-ASCVRAVKGASTQ 639
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 91 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ + H+ PV ++ F+ + L+ S + R WD + C++ + V+F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQ----VRF 642
Query: 432 SPNGKYILAATLDNTLKLWD 491
P LAA +NT+ ++D
Sbjct: 643 QPRTGQFLAAASENTVSIFD 662
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMET 541
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 195
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 196 IVSGSFDESVRIWDVRTGKC 255
+V G + +++ +W+ KC
Sbjct: 734 LVIGGY-QAIELWNTMENKC 752
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFN 180
E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+ V +F+
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFH 604
Query: 181 P-QSNLIVSGSFDESVRIWDV 240
P ++ L+ S + +R WD+
Sbjct: 605 PKKTELLCSCDSNNDIRFWDI 625
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 226 RIWD 237
+IWD
Sbjct: 577 KIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
R G + ++S + I+D + + + V V +SPNG+ ++A+ ++ +KL
Sbjct: 645 RTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKL 702
Query: 486 WDYSRGKC*RHIRDTRTK--NIVSLPTLVSLAGSG*YRDQKTTWCTYGTFNQRRLYRGCL 659
W S G C + ++ K ++V P+ L G Y+ + W T C+
Sbjct: 703 WSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE-LWNTMENKCMTVAGHECV 761
Query: 660 DTRIQFSARACHPTENIIASAALENDKTIQLWK 758
SA A P+ ++ASA+ +DK++++WK
Sbjct: 762 -----ISALAQSPSTGVVASAS--HDKSVKIWK 787
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 480 KLWDYS 497
K+WD S
Sbjct: 577 KIWDAS 582
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY 449
H+ ++ V F + + + +SS+D +IWD + G L+T I PV + F P
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDFHPKKTE 609
Query: 450 IL-AATLDNTLKLWDYSRGKC*RHIRDTRTK 539
+L + +N ++ WD + C R ++ T+
Sbjct: 610 LLCSCDSNNDIRFWDIN-ASCVRAVKGASTQ 639
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 91 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ + H+ PV ++ F+ + L+ S + R WD + C++ + V+F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQ----VRF 642
Query: 432 SPNGKYILAATLDNTLKLWD 491
P LAA +NT+ ++D
Sbjct: 643 QPRTGQFLAAASENTVSIFD 662
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMET 541
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 195
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 196 IVSGSFDESVRIWDVRTGKC 255
+V G + +++ +W+ KC
Sbjct: 734 LVIGGY-QAIELWNTMENKC 752
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFN 180
E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+ V +F+
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFH 604
Query: 181 P-QSNLIVSGSFDESVRIWDV 240
P ++ L+ S + +R WD+
Sbjct: 605 PKKTELLCSCDSNNDIRFWDI 625
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 226 RIWD 237
+IWD
Sbjct: 577 KIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
R G + ++S + I+D + + + V V +SPNG+ ++A+ ++ +KL
Sbjct: 645 RTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKL 702
Query: 486 WDYSRGKC*RHIRDTRTK--NIVSLPTLVSLAGSG*YRDQKTTWCTYGTFNQRRLYRGCL 659
W S G C + ++ K ++V P+ L G Y+ + W T C+
Sbjct: 703 WSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE-LWNTMENKCMTVAGHECV 761
Query: 660 DTRIQFSARACHPTENIIASAALENDKTIQLWK 758
SA A P+ ++ASA+ +DK++++WK
Sbjct: 762 -----ISALAQSPSTGVVASAS--HDKSVKIWK 787
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 480 KLWDYS 497
K+WD S
Sbjct: 577 KIWDAS 582
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY 449
H+ ++ V F + + + +SS+D +IWD + G L+T I PV + F P
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDFHPKKTE 609
Query: 450 IL-AATLDNTLKLWDYSRGKC*RHIRDTRTK 539
+L + +N ++ WD + C R ++ T+
Sbjct: 610 LLCSCDSNNDIRFWDIN-ASCVRAVKGASTQ 639
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 91 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ + H+ PV ++ F+ + L+ S + R WD + C++ + V+F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQ----VRF 642
Query: 432 SPNGKYILAATLDNTLKLWD 491
P LAA +NT+ ++D
Sbjct: 643 QPRTGQFLAAASENTVSIFD 662
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMET 541
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 195
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 196 IVSGSFDESVRIWDVRTGKC 255
+V G + +++ +W+ KC
Sbjct: 734 LVIGGY-QAIELWNTMENKC 752
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFN 180
E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+ V +F+
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFH 604
Query: 181 P-QSNLIVSGSFDESVRIWDV 240
P ++ L+ S + +R WD+
Sbjct: 605 PKKTELLCSCDSNNDIRFWDI 625
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 226 RIWD 237
+IWD
Sbjct: 577 KIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
R G + ++S + I+D + + + V V +SPNG+ ++A+ ++ +KL
Sbjct: 645 RTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKL 702
Query: 486 WDYSRGKC*RHIRDTRTK--NIVSLPTLVSLAGSG*YRDQKTTWCTYGTFNQRRLYRGCL 659
W S G C + ++ K ++V P+ L G Y+ + W T C+
Sbjct: 703 WSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE-LWNTMENKCMTVAGHECV 761
Query: 660 DTRIQFSARACHPTENIIASAALENDKTIQLWK 758
SA A P+ ++ASA+ +DK++++WK
Sbjct: 762 -----ISALAQSPSTGVVASAS--HDKSVKIWK 787
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 480 KLWDYS 497
K+WD S
Sbjct: 577 KIWDAS 582
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY 449
H+ ++ V F + + + +SS+D +IWD + G L+T I PV + F P
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDFHPKKTE 609
Query: 450 IL-AATLDNTLKLWDYSRGKC*RHIRDTRTK 539
+L + +N ++ WD + C R ++ T+
Sbjct: 610 LLCSCDSNNDIRFWDIN-ASCVRAVKGASTQ 639
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 91 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
L+ + H+ PV ++ F+ + L+ S + R WD + C++ + V+F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQ----VRF 642
Query: 432 SPNGKYILAATLDNTLKLWD 491
P LAA +NT+ ++D
Sbjct: 643 QPRTGQFLAAASENTVSIFD 662
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMET 541
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ H I S ++ + +AS DKT+K+W + K K L GH +V+ C F+
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+V+ S D + R+W + GK
Sbjct: 267 FLVTASSDMTARLWSMPAGK 286
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 171
EK ++GH+ + D +S D +V+AS D T ++W + +GK +K +GH CC
Sbjct: 246 EKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T H + V + D++ + S S+D T+K+W+L + C K + + V +P
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA-AVNTVVLHPNQ 131
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
++SG + ++R+WD+R C
Sbjct: 132 TELISGDQNGNIRVWDLRANSC 153
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +3
Query: 228 DMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 407
D+ + + + +H++ V AV F D + S S DG +IWD + C K +
Sbjct: 62 DVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEY--ESV 119
Query: 408 PPVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
V+ V PN +++ + +++WD C
Sbjct: 120 AAVNTVVLHPNQTELISGDQNGNIRVWDLRANSC 153
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/65 (24%), Positives = 37/65 (56%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
S S ++ +AS D T++ WE +G+C +T++ ++V P + + + + + +R+
Sbjct: 2 SQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYL-AAACNPHIRL 60
Query: 232 WDVRT 246
+DV +
Sbjct: 61 FDVNS 65
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 115 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC*NHYRRI 276
+S + + T H+N V F + + SGS D +V+IWD+R C Y +
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESV 119
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/58 (29%), Positives = 37/58 (63%)
Frame = +3
Query: 318 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 491
++ ++SYD R W+ +G+C +T+ D+ V+ ++ +P+ K+ LAA + ++L+D
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDS-HVNRLEITPD-KHYLAAACNPHIRLFD 62
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPNGKYILAATLD 470
DG+++V+++ G C +W G+ T + N + SP KY+ A+ D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 471 NTLKLWD 491
T+K+W+
Sbjct: 233 KTVKIWN 239
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 503 KMLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
K+ K TGH+ + C+F+ G+++V+ S D +W++ + + V+ GH +
Sbjct: 244 KLEKVLTGHQRWVWDCVFS----VDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATV 299
Query: 680 CTGL 691
C L
Sbjct: 300 CCAL 303
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 431 LTEWKIYIGGDVRQHTQIMGL*QR--KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 604
+T K Y+ H ++ + + + TY H N + F KW+ SGSED
Sbjct: 43 ITPDKHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAV--GFQCDA-KWMYSGSED 99
Query: 605 NLVYIWNLQS 634
V IW+L++
Sbjct: 100 GTVKIWDLRA 109
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 187 SNLIVSGSFDESVRIWDVRTGKC*NHYRRIQ 279
S ++ + S+D ++R W+ TG+C YR IQ
Sbjct: 5 SVILATASYDHTIRFWEAETGRC---YRTIQ 32
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH + + SSD IVS SDD ++ VW+ + + L+ LKGH + V C
Sbjct: 894 TLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSG 950
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+++ + D +V++WDVRT C
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMC 972
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/80 (26%), Positives = 44/80 (55%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH +S V S R +++A+ D T+K+W++ + C+ T+ S+ + ++ +
Sbjct: 935 LKGHDSQVSCVKMLSGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 193 LIVSGSFDESVRIWDVRTGK 252
++ + D IWD+R+GK
Sbjct: 994 ILAAAGRDTVANIWDIRSGK 1013
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
+ GH I + D+ +++ SDD T +VW +S G C L H+ V ++P
Sbjct: 1018 LKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 193 LIVSGSFDESVRIWDVRTG--KC 255
I++GS D +R W+ G KC
Sbjct: 1076 GIITGSADGLLRFWENDEGGIKC 1098
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ I + + + ++ +A D +W++ SGK + LKGH+ ++ +
Sbjct: 975 TVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWI--RSIRMVE 1032
Query: 190 NLIVSGSFDESVRIWDVRTGKC 255
+ +++GS D + R+W V G C
Sbjct: 1033 DTLITGSDDWTARVWSVSRGSC 1054
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/94 (32%), Positives = 44/94 (46%)
Frame = +3
Query: 228 DMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 407
D E+ L H+ V A+ + D IVS S D +WD + Q L+ L D+
Sbjct: 883 DPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDS 940
Query: 408 PPVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
VS VK +G+ +L A D T+K+WD C
Sbjct: 941 -QVSCVKML-SGERVLTAAHDGTVKMWDVRTDMC 972
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+ ++L+ L H VS V G ++++++DG ++WD + C+ T + + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVAT-VGRCSSAIL 984
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGK 506
+++ + + AA D +WD GK
Sbjct: 985 SLEYDDSTGILAAAGRDTVANIWDIRSGK 1013
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+ + L H+ + ++ D +++ S D R+W + G C L P V V+
Sbjct: 1013 KQMHKLKGHTKWIRSIRMVED--TLITGSDDWTARVWSVSRGSCDAVLACHAGP-VQSVE 1069
Query: 429 FSPNGKYILAATLDNTLKLWDYSRG--KC*RHI 521
+SP K I+ + D L+ W+ G KC ++I
Sbjct: 1070 YSPFDKGIITGSADGLLRFWENDEGGIKCVKNI 1102
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
IVSGS+D V +W+ Q+ ++++ L GH V C
Sbjct: 912 IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSC 944
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPPVSFVKFSP 437
L H+ PV +V ++ I++ S DGL R W+ G +C+K + + S + +
Sbjct: 1058 LACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSS---SILSINA 1114
Query: 438 NGKYILAATLDNTLKLW 488
++ DN++ L+
Sbjct: 1115 GENWLGIGAADNSMSLF 1131
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 581 WIVSGSEDNLVYIW--NLQSKEIVQRLSGHTDTV 676
+ +SGS D LV IW +L+ E+ L GHT TV
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTV 902
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-DTASGQ--CLKTLIDDDNPPVS 419
++L L HS V++V F D L++++S D RIW + G C TL +D + V
Sbjct: 255 QILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTL-NDHSAEVR 313
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNI 545
V P KY ++A+LD T +D S G C + D +KN+
Sbjct: 314 AVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD-SKNV 354
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFN 180
T++GH ++ V + DS L+++AS DKT+++W + C TL HS V +
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC 255
P + VS S D + +D+ +G C
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSC 343
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKY 449
HS V AV + VS+S DG +D +SG CL + DD N + F P+G
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 450 ILAATLDNTLKLWD 491
+ T + +K+WD
Sbjct: 368 LGTGTSQSVVKIWD 381
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
+K GI + +I + D T +++ SG+ L TL GHS V F S+L++
Sbjct: 221 NKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVL 280
Query: 202 SGSFDESVRIW 234
+ S D++VRIW
Sbjct: 281 TASADKTVRIW 291
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNP 183
T++ H + V ++ VSAS D T ++LSSG CL + S V F+P
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
++ +G+ V+IWDV++
Sbjct: 364 DGLILGTGTSQSVVKIWDVKS 384
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/66 (21%), Positives = 36/66 (54%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
A+ D ++ + + +K+W++ S + GH+ V +F+ ++ ++ + ++ V
Sbjct: 360 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGV 418
Query: 226 RIWDVR 243
R+WD+R
Sbjct: 419 RLWDLR 424
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-DTASGQ--CLKTLIDDDNPPVS 419
++L L HS V++V F D L++++S D RIW + G C TL +D + V
Sbjct: 255 QILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTL-NDHSAEVR 313
Query: 420 FVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNI 545
V P KY ++A+LD T +D S G C + D +KN+
Sbjct: 314 AVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD-SKNV 354
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFN 180
T++GH ++ V + DS L+++AS DKT+++W + C TL HS V +
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC 255
P + VS S D + +D+ +G C
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSC 343
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKY 449
HS V AV + VS+S DG +D +SG CL + DD N + F P+G
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 450 ILAATLDNTLKLWD 491
+ T + +K+WD
Sbjct: 368 LGTGTSQSVVKIWD 381
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
+K GI + +I + D T +++ SG+ L TL GHS V F S+L++
Sbjct: 221 NKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVL 280
Query: 202 SGSFDESVRIW 234
+ S D++VRIW
Sbjct: 281 TASADKTVRIW 291
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNP 183
T++ H + V ++ VSAS D T ++LSSG CL + S V F+P
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 184 QSNLIVSGSFDESVRIWDVRT 246
++ +G+ V+IWDV++
Sbjct: 364 DGLILGTGTSQSVVKIWDVKS 384
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/66 (21%), Positives = 36/66 (54%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
A+ D ++ + + +K+W++ S + GH+ V +F+ ++ ++ + ++ V
Sbjct: 360 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGV 418
Query: 226 RIWDVR 243
R+WD+R
Sbjct: 419 RLWDLR 424
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 54.8 bits (126), Expect = 7e-08
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK---CLKTLKGHSNYVFCCNFN 180
T+ GH+ + V+W++ + + S DK++ +WE+ G C L GH+ V ++
Sbjct: 113 TLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 181 PQSNLIVSGSFDESVRIW 234
P +++ S S+D ++++W
Sbjct: 173 PTMDVLFSCSYDNTIKVW 190
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLKGHSNYVFCCNFNPQSNL 195
H + AWS +L+ +AS D T +W+ S +C+ TL+GH N V ++N +
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 196 IVSGSFDESVRIWDVRTG 249
+ + S D+SV IW+V G
Sbjct: 133 LATCSRDKSVWIWEVLEG 150
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVW--ELSSGK--CLKTL----KGHSNYVFC 168
++GH + V W ++ S S D T+KVW E G+ C++TL GHS+ V+
Sbjct: 159 LTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 169 CNFNPQSNLIVSGSFDESVRIWDVRTGK 252
+FN + +V+ S D +++IW K
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW----DTASGQCLKTLIDDDN---PPVSF 422
L H+ V V ++ ++ S SYD ++W D QC++TL + +N V
Sbjct: 159 LTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 423 VKFSPNGKYILAATLDNTLKLW 488
+ F+ G ++ + D TLK+W
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIW 240
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLIDDDNPPVSFVKFSPNGK 446
H+ V + ++ G L+ ++S+DG IW + +C+ TL +N V V ++ +G
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHEN-EVKSVSWNASGS 131
Query: 447 YILAATLDNTLKLWDYSRG 503
+ + D ++ +W+ G
Sbjct: 132 CLATCSRDKSVWIWEVLEG 150
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +1
Query: 7 KTISGHKMGISDVAWS--SDSRLIVSASDDKTLKVWELSS 120
K H+ ++ V WS +RL+ SASDD +K+W+L++
Sbjct: 311 KKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +3
Query: 279 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNP-PVSFVKFSPNGK 446
+PVS+ H + ++ S S D RIW+ +S KT++++ + V +SP+G+
Sbjct: 29 NPVSS-HADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQ 87
Query: 447 YILAATLDNTLKLW 488
+ A+ D T +W
Sbjct: 88 LLATASFDGTTGIW 101
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/85 (25%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGK------CLKTLKG-HSNY 159
+GH + +++++ +V+ SDD TLK+W ++ SG+ L TL G H
Sbjct: 210 NGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRT 269
Query: 160 VFCCNFNPQSNLIVSGSFDESVRIW 234
++ +++ + ++I SG+ D ++R++
Sbjct: 270 IYSAHWS-RDDIIASGAGDNAIRLF 293
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNR-DGS-LIVSSSYDGLCRIWDTAS 371
+LK AH + V++V ++ +G+ L+ S+S DG+ +IW A+
Sbjct: 309 LLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 16 SGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQ 186
+GHK + DVA+ S ++ S DD L +W+ +G +K K H + C ++NP
Sbjct: 278 NGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPH 337
Query: 187 -SNLIVSGSFDESVRIWDVR 243
+NLI++GS D +VR++D R
Sbjct: 338 DNNLILTGSADNTVRVFDRR 357
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNPQS 189
++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS V+ C +
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--D 288
Query: 190 NLIVSGSFDESVRIWDV 240
+LIV+ D + R+W V
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNL 195
GH + + D SDS LIV+A +D T +VW + G L+ +K H ++ C ++P S+L
Sbjct: 276 GHSVRVWDCC-ISDS-LIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWRCLYDPNSSL 332
Query: 196 IVSGSFDESVRI 231
+V+ FD ++++
Sbjct: 333 LVTAGFDSAIKV 344
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 521 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV-QRLSGHT 667
TGH+ + I +S+ G K IVS S+D IW + S+E+V L GH+
Sbjct: 232 TGHEGSIFRIV--WSLDGSK-IVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +3
Query: 228 DMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 407
D G + + L H + + ++ DGS IVS S D RIW+ S + + ++ +
Sbjct: 219 DHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
Query: 408 PPVSFVKFSPNGKYILAATLDNTLKLW 488
V S + I+ A D T ++W
Sbjct: 279 VRVWDCCISDS--LIVTAGEDCTCRVW 303
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNPQS 189
++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS V+ C +
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--D 288
Query: 190 NLIVSGSFDESVRIWDV 240
+LIV+ D + R+W V
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNL 195
GH + + D SDS LIV+A +D T +VW + G L+ +K H ++ C ++P S+L
Sbjct: 276 GHSVRVWDCC-ISDS-LIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWRCLYDPNSSL 332
Query: 196 IVSGSFDESVRI 231
+V+ FD ++++
Sbjct: 333 LVTAGFDSAIKV 344
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 521 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV-QRLSGHT 667
TGH+ + I +S+ G K IVS S+D IW + S+E+V L GH+
Sbjct: 232 TGHEGSIFRIV--WSLDGSK-IVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +3
Query: 228 DMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 407
D G + + L H + + ++ DGS IVS S D RIW+ S + + ++ +
Sbjct: 219 DHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
Query: 408 PPVSFVKFSPNGKYILAATLDNTLKLW 488
V S + I+ A D T ++W
Sbjct: 279 VRVWDCCISDS--LIVTAGEDCTCRVW 303
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
+ GH M + + +S D R++ S SDD + + + L ++ GH+++V + +P
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 190 NLIVSGSFDESVRIWDVR 243
I +GS D +VR+WD++
Sbjct: 256 GAIATGSSDRTVRLWDLK 273
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-- 183
++SGH + V S D I + S D+T+++W+L ++T+ H++ V+ F P
Sbjct: 238 SMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPG 297
Query: 184 ----QSNLIVSGSFDESVRIWD 237
++ + S S D+SV ++D
Sbjct: 298 GTGVRAGRLASVSDDKSVSLYD 319
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+KT S K + VAWS + + + S D T+ V+++ K L L+GH+ V F+P
Sbjct: 153 DKTSS--KKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSP 210
Query: 184 -QSNLIVSGSFDESVRIWD 237
++ SGS D V + D
Sbjct: 211 VDPRVLFSGSDDGHVNMHD 229
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
L+++ S D+T+K+W ++T GHS V +P + S S D VR++DV T
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT 91
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
E + +L + H+ V +V + DG I + S D R+WD ++T+ + ++ S
Sbjct: 231 EGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWS 290
Query: 420 FVKFSPNGKYILAATL-----DNTLKLWDYS 497
P G + A L D ++ L+DYS
Sbjct: 291 VAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
+ ++L L H+ PV ++ F+ D ++ S S DG + D A G+ L + V
Sbjct: 188 DRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLGSMSGHTSWV 246
Query: 417 SFVKFSPNGKYILAATLDNTLKLWD 491
V SP+G I + D T++LWD
Sbjct: 247 LSVDASPDGGAIATGSSDRTVRLWD 271
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/85 (24%), Positives = 39/85 (45%)
Frame = +2
Query: 443 KIYIGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 622
++ G H + + +L + +GH + + + + S GG I +GS D V +W
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTS--WVLSVDASPDGGA-IATGSSDRTVRLW 270
Query: 623 NLQSKEIVQRLSGHTDTVLCTGLPP 697
+L+ + +Q +S H D V P
Sbjct: 271 DLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 35.1 bits (77), Expect = 0.062
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWDTASGQCLKTLI----DDDNPP----- 413
L A V + F G+++ V+ ++WDTAS + + TL D P
Sbjct: 98 LEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSS 157
Query: 414 ---VSFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
V V +SPNGK + ++D T+ ++D R K
Sbjct: 158 KKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSK 191
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSF 422
++++ HS V+A+ + G + SSS D R++D + + L + PP V
Sbjct: 51 DLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVL---EAPPSEVWG 107
Query: 423 VKFSPNGKYI-LAATLDNTLKLWD 491
++F P G + +A ++KLWD
Sbjct: 108 MQFEPKGTILAVAGGSSASVKLWD 131
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
K+L GH + FS + + SGS+D V + + + K ++ +SGHT VL
Sbjct: 191 KLLHQLEGHNMPVRSLV--FSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLS 248
Query: 683 TGLPP 697
P
Sbjct: 249 VDASP 253
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 195
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 196 IVSGSFDESVRIWDVR 243
++SGSFD++V + D R
Sbjct: 292 LLSGSFDQTVVLKDGR 307
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Frame = +1
Query: 10 TISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFN 180
TI+GH + V+++ S L+ + S D+T+K+W+LS+ + C+ T ++ +F F+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFS 423
Query: 181 PQSN-LIVSGSFDESVRIWD 237
P + L+ G +++WD
Sbjct: 424 PDNPFLLAMGGVMGELKLWD 443
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +3
Query: 222 CSDMGCENREMLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLID 398
C +G +N+E +H+ V + +N++ +++ S+S D ++WD A+G C K ++
Sbjct: 215 CVQLGGQNKEGNYKQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTC-KITME 273
Query: 399 DDNPPVSFVKFSPNG-KYILAATLDNTLKLWD 491
V V ++ + +L+ + D T+ L D
Sbjct: 274 HHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKD 305
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKC 255
H+ V +N + N++ S S D+ V++WDV TG C
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTC 268
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 136 TLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDV 240
T+ GH ++N + NL+ +GS D +V++WD+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
K++ Y GHK ++ I + F +I SGSED+ VYIW+ + +++ L GH V C
Sbjct: 477 KIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNC 536
Query: 683 TGLPPHRKH 709
P H
Sbjct: 537 VSWSPTNLH 545
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH + + WS D R +++ ++ ++ W++ SG C+ + C + P
Sbjct: 314 TLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDG 373
Query: 190 NLIVSGSFDESVRIWDV 240
I++G D S+ +WD+
Sbjct: 374 QGIIAGMTDRSICMWDL 390
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQ-CLKTLIDDDNPPVSFVKFSP 437
L +H+D V + F+ +G + SSS D IW+ +A G LK + + PV + +SP
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 438 NGKYILAATLDNTLKLWDYSRGKC 509
+ + +L + ++ WD G C
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDC 353
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIW 234
I S S+D + +W S+GK + L GH+ V C +++P + +++ S S D ++RIW
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK---TLKGHSNYVFCCNFNP 183
+ H + + +S + + + S+S D+T +WE+S+ + TL GH V ++P
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC*NHYRR 273
+++ +E +R WDV +G C + Y +
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEK 359
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H PV A+ ++ D +++ + + R WD SG C+ P+S + P+G
Sbjct: 315 LVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPIS-CGWYPDG 373
Query: 444 KYILAATLDNTLKLWD 491
+ I+A D ++ +WD
Sbjct: 374 QGIIAGMTDRSICMWD 389
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFC---C 171
E+ I M I+ + S+D++ I+ ++ +++W + K + KGH F C
Sbjct: 437 ERLIEEEDM-ITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSC 495
Query: 172 NFNPQSNLIVSGSFDESVRIWDVRTGK 252
+ I SGS D V IW TGK
Sbjct: 496 FGGYKQAFIASGSEDSQVYIWHRSTGK 522
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
VS + DG +VS D + ++D + ++ LI++++ SF S + KYIL
Sbjct: 406 VSDIAMTDDGKWLVSVCKDSVISLFDREA--TVERLIEEEDMITSF-SLSNDNKYILVNL 462
Query: 465 LDNTLKLWD 491
L+ ++LW+
Sbjct: 463 LNQEIRLWN 471
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 13 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL 114
+ GH ++ V+WS ++ ++ SASDD T+++W L
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 390 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 497
+++ V F++FS NGKY+ +++ D T +W+ S
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIS 304
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 195
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 196 IVSGSFDESVRIWDVR 243
++SGSFD++V + D R
Sbjct: 324 LLSGSFDQTVVMKDGR 339
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 10 TISGHKM--GISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCN 174
TI H G+S ++++ S L+ + S DK++K+W+LS+ + C+ T + ++ VF +
Sbjct: 397 TIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSIS 456
Query: 175 FNPQSN-LIVSGSFDESVRIWD 237
F + L+ G + +WD
Sbjct: 457 FAVDNPFLLAIGGSKGELHVWD 478
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKC 255
H+ V +N + N++ S S D+ V++WDV TG C
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTC 300
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/76 (23%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 270 AHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG- 443
+H++ V + +N++ +++ S+S D ++WD A+G C K ++ V V ++
Sbjct: 263 SHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTC-KITMEHHTKEVQAVAWNHYAP 321
Query: 444 KYILAATLDNTLKLWD 491
+ +L+ + D T+ + D
Sbjct: 322 EVLLSGSFDQTVVMKD 337
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 190 NLIVSGSFDESVRIWDV 240
NL+ +GS D+SV++WD+
Sbjct: 418 NLLATGSMDKSVKLWDL 434
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H IS +A S D RL+ S S DKT KVW +S +C++++ H + V + L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV-VSGFDGLVF 268
Query: 202 SGSFDESVRIW 234
+GS D +V++W
Sbjct: 269 TGSADGTVKVW 279
Score = 35.9 bits (79), Expect = 0.036
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK----CLKTLKGHSNYVFCCNFN 180
+ GHK+ + + + L+ S S D ++VW G CL L GH+ V C
Sbjct: 339 LKGHKLAV--LCLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVE 396
Query: 181 PQSN--------LIVSGSFDESVRIWDV 240
++ SGS D SV++W V
Sbjct: 397 RDQESVSGERRWIVYSGSLDRSVKMWRV 424
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H D +S + + D L+ S S+D ++W + +C+++ ++ V+ V +G +
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVES-VNAHEDAVNAVVSGFDG-LV 267
Query: 453 LAATLDNTLKLW 488
+ D T+K+W
Sbjct: 268 FTGSADGTVKVW 279
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
H + + C + L+ SGS+D++ ++W V +C
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRC 245
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/76 (28%), Positives = 42/76 (55%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++P
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 106
Query: 187 SNLIVSGSFDESVRIW 234
+ + S S D + RI+
Sbjct: 107 AKYVASLSSDRTCRIY 122
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 67 LIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 228
L+ S +D L +W+L S K K+L H V ++P ++SGS D S
Sbjct: 19 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 78
Query: 229 IWDVRTG 249
IWDV G
Sbjct: 79 IWDVNKG 85
Score = 29.5 bits (63), Expect = 3.1
Identities = 8/27 (29%), Positives = 21/27 (77%)
Frame = +3
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSRG 503
+++SP+ Y+++ ++DN+ +WD ++G
Sbjct: 59 LQWSPDDAYLISGSVDNSCIIWDVNKG 85
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/76 (28%), Positives = 42/76 (55%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++P
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 187 SNLIVSGSFDESVRIW 234
+ + S S D + RI+
Sbjct: 166 AKYVASLSSDRTCRIY 181
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYV 162
++ +++ H ++ + +S L+ S +D L +W+L S K K+L H V
Sbjct: 56 YQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDV 115
Query: 163 FCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
++P ++SGS D S IWDV G
Sbjct: 116 LDLQWSPDDAYLISGSVDNSCIIWDVNKG 144
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-----DTASGQCLKTLIDDDNPPVSFVK 428
L H V+ + F+ G L+ S + G IW +T + + V ++
Sbjct: 60 LTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQ 119
Query: 429 FSPNGKYILAATLDNTLKLWDYSRG 503
+SP+ Y+++ ++DN+ +WD ++G
Sbjct: 120 WSPDDAYLISGSVDNSCIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/76 (28%), Positives = 42/76 (55%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++P
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 187 SNLIVSGSFDESVRIW 234
+ + S S D + RI+
Sbjct: 166 AKYVASLSSDRTCRIY 181
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYV 162
++ +++ H ++ + +S L+ S +D L +W+L S K K+L H V
Sbjct: 56 YQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDV 115
Query: 163 FCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
++P ++SGS D S IWDV G
Sbjct: 116 LDLQWSPDDAYLISGSVDNSCIIWDVNKG 144
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-----DTASGQCLKTLIDDDNPPVSFVK 428
L H V+ + F+ G L+ S + G IW +T + + V ++
Sbjct: 60 LTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQ 119
Query: 429 FSPNGKYILAATLDNTLKLWDYSRG 503
+SP+ Y+++ ++DN+ +WD ++G
Sbjct: 120 WSPDDAYLISGSVDNSCIIWDVNKG 144
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/66 (31%), Positives = 40/66 (60%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 222
+A SSD R + + D+ + +W++ + + ++ GH N V C F ++ + SGSFD +
Sbjct: 228 LAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRT 287
Query: 223 VRIWDV 240
V++W+V
Sbjct: 288 VKVWNV 293
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 458 GDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 637
G V +H I + R+ ++ + GH+N C+ + G + SGS D V +WN++ K
Sbjct: 240 GGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRY---GTSELYSGSFDRTVKVWNVEDK 296
Query: 638 EIVQRLSGHTDTVL 679
+ GH +L
Sbjct: 297 AFITENHGHQGEIL 310
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
G+++ +G D V+IW+++++E VQ GH +TV C
Sbjct: 234 GRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSC 269
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 19/94 (20%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-------------------K 144
H+ + VA S D SAS D T+ W++SSGK K + K
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 145 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
HS + + +G D V IWDVRT
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRT 253
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 362
RE ++ P H + VS + F S + S S+D ++W+
Sbjct: 254 REHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN 292
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAA 461
+ V FN GSL+ + DG C IWD + K + D+D + ++ V +S G +L +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 462 TLDNTLKLWDYSRGK 506
D +L LWD S G+
Sbjct: 86 AADKSLTLWDVSTGE 100
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 267 PAHSDPVS--AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 440
P + P S A FN+ G L+ + G I D S + L + PV + FS N
Sbjct: 168 PESNPPFSPAAACFNKCGDLVYIGNSKGEILIVDYKSVRVLALVSASGAAPVKNIVFSRN 227
Query: 441 GKYILAATLDNTLKLWD 491
G+Y+L + D T+++++
Sbjct: 228 GQYLLTNSHDRTIRIYE 244
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/32 (46%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +1
Query: 34 ISDVAWSS-DSRLIVSASDDKTLKVWELSSGK 126
I+ V+WS RL+VSA+D K+L +W++S+G+
Sbjct: 70 ITSVSWSKYGHRLLVSAAD-KSLTLWDVSTGE 100
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCNFNPQSNLIVSG 207
I VA++ L+ + D +W+ + K ++ + S + +++ + ++
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 208 SFDESVRIWDVRTGK 252
+ D+S+ +WDV TG+
Sbjct: 86 AADKSLTLWDVSTGE 100
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H +S ++ + D L+ S S DKTLKVW LS KCL++++ H + V + +L+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVF 302
Query: 202 SGSFDESVRIW 234
+GS D ++++W
Sbjct: 303 TGSADGTLKVW 313
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H D VS + N D L+ S S+D ++W + +CL+++ D+ + V S +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVV--SGFDDLV 301
Query: 453 LAATLDNTLKLWDYS-RGKC*RHI 521
+ D TLK+W +GK +H+
Sbjct: 302 FTGSADGTLKVWKREVQGKEMKHV 325
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
H + V C + N L+ SGS+D+++++W + KC
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKC 279
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFC 168
++I H ++ V D L+ + S D TLKVW+ GK +K L N V
Sbjct: 281 ESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTA 339
Query: 169 CNFNPQSNLIVSGSFDESVRIWD 237
N ++ GS D +V W+
Sbjct: 340 LAVNLTDAVVYCGSSDGTVNFWE 362
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H +S ++ + D L+ SAS D+T+KVW + KC++++K H + V + +L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAV--NSVTTAESLVF 191
Query: 202 SGSFDESVRIW 234
+GS D +V++W
Sbjct: 192 TGSADGTVKVW 202
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
HSD VS + D L+ S+S+D ++W +C++++ D+ V+ V + + +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDD-AVNSVTTAES--LV 190
Query: 453 LAATLDNTLKLWDYS-RGK 506
+ D T+K+W RGK
Sbjct: 191 FTGSADGTVKVWKREIRGK 209
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
HS+ V C + L+ S S+D +V++W + KC
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKC 169
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK---CLKTLKGHSNYVFCCNFNPQSN 192
H++ + +A + +L+ S + DK + VW GK C+ L GH+ V C S
Sbjct: 265 HRLAVLCIA--AAGKLLFSGAADKKICVWR-REGKVHTCVSVLTGHTGPVKCLAVVEPSG 321
Query: 193 -----------LIVSGSFDESVRIWDV 240
++ SGS D+SV++W V
Sbjct: 322 GEEEDGGDGRLVLYSGSLDKSVKVWRV 348
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNL 195
G+ GI V +S+D R +V+ S D ++ V++L + + L+T+ S+ C + NL
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 196 IVSGSFDESVRIWDVR 243
I+SGS D ++WD R
Sbjct: 287 ILSGSDDNLCKVWDRR 302
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTAS--GQCLKT-LIDDDNP 410
NR L+ + AH+ V+ V F + G+LI+S S D LC++WD G+ ++
Sbjct: 261 NRVSLRTV-AHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLE 319
Query: 411 PVSFVKFSPNGKYILAATLDNTLKLWD 491
V+F+ +G+Y ++ D T+KLWD
Sbjct: 320 GVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/64 (31%), Positives = 38/64 (59%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 225
A S+ + I + S+D ++ +++L SG + LK HS+ V CN++P ++S S+D +
Sbjct: 408 AHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDL 467
Query: 226 RIWD 237
W+
Sbjct: 468 VKWE 471
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +1
Query: 22 HKMGISDVAWSSDS-RLIVSASDDKTLKVWE----LSSGKCLKTLKGHSNYVFCCNFNPQ 186
H ++ V ++ +S LI+S SDD KVW+ + K L GH V +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGD 329
Query: 187 SNLIVSGSFDESVRIWDVR 243
+S D+++++WD+R
Sbjct: 330 GRYFISNGKDQTIKLWDIR 348
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 509 LKTYTGHKNEKY---CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
+ TY GH + C F+ TG K+I +GS D+ VYI++L S + V L H+ V
Sbjct: 388 VSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPV 446
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 551 FANFSV---TGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
F FSV T G+ +V+GS D+ +Y+++L++ + R HT V
Sbjct: 230 FGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDV 274
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
GH G++ + D R +S D+T+K+W++
Sbjct: 316 GHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 145 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
G+S +F F+ +V+GS D+S+ ++D+ +
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANR 262
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
I +A +++ +V + +WE+++GK LK GH V C F+ +L+VSGS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 214 DESVRIWDV 240
D S+R+W +
Sbjct: 141 DGSIRVWSL 149
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 FEKTISGHKMGISDVA--WSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
+E + H M ++D+ + + +I+S+S+D+T KVW LS GK LK +
Sbjct: 165 YEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI 213
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW------DTASGQCLKTLID---- 398
++LK H V+ + F+ D SL+VS S DG R+W D Q TL +
Sbjct: 111 KLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFN 170
Query: 399 DDNPPVSFVKFSPNG--KYILAATLDNTLKLWDYSRGKC*RHI 521
+ V+ + G I++++ D T K+W SRGK ++I
Sbjct: 171 EHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI 213
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +3
Query: 279 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 458
+P+ A+ N +G+ +V G +W+ A+G+ LK V+ + FS + +++
Sbjct: 79 EPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKW-HGHYRSVTCLVFSGDDSLLVS 137
Query: 459 ATLDNTLKLWDYSR 500
+ D ++++W R
Sbjct: 138 GSQDGSIRVWSLIR 151
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---------SSGKCL--KTLKGHSNYV- 162
GH ++ + +S D L+VS S D +++VW L G L H+ V
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 163 -FCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
++ + +I+S S D + ++W + GK
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 395
++ + + DG+L++S S DG+ +WD S + ++TLI
Sbjct: 266 ITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLI 302
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 315 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
++I+SSS D C++W + G+ LK +I ++ + P G A D+ +
Sbjct: 188 AVIISSSEDRTCKVWSLSRGKLLKNIIFPS--VINALALDPGGCVFYAGARDSKI 240
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 452 IGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL- 628
+GG + + + K+LK + GH C+ FS +VSGS+D + +W+L
Sbjct: 94 VGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLV--FS-GDDSLLVSGSQDGSIRVWSLI 150
Query: 629 QSKEIVQRLSGHT 667
+ + QR G+T
Sbjct: 151 RLFDDFQRQQGNT 163
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
++S I+ +A+ +D L++S S+D + VW+ S + ++TL
Sbjct: 258 SVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL 301
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 682
G ++V G +Y+W + + +++++ GH +V C
Sbjct: 90 GTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTC 125
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
+++++ S D +L+ D + + SGK + L+GH +Y F ++P ++ +G+
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQ 339
Query: 214 DESVRIWDVR 243
D + R+WDVR
Sbjct: 340 DTTCRLWDVR 349
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQS 189
+ GH AW + +++ + + D T ++W++ + + LK LKG+ + F
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 190 NLIVSGSFDESVRIWDVRTG 249
+ + V ++D G
Sbjct: 375 RFLAMAEPADFVHLFDTEAG 394
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLI 395
EC + +++ L H D + ++ +G ++ + + D CR+WD + Q LK L
Sbjct: 300 ECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVL- 358
Query: 396 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
+ + ++F+ +G+++ A + + L+D G
Sbjct: 359 KGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAG 394
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/70 (27%), Positives = 40/70 (57%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
+++ + S D +L+ D + + SGK + +L+GH +Y F ++P ++ +G+
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 214 DESVRIWDVR 243
D + R+WD+R
Sbjct: 311 DTACRLWDIR 320
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/95 (20%), Positives = 45/95 (47%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 398
EC + +++ L H D A ++ +G ++ + + D CR+WD + ++
Sbjct: 271 ECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLK 330
Query: 399 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
+ + +KF+P G+++ A + + ++D G
Sbjct: 331 GNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSG 365
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQ 186
++ GHK AW + ++ + + D ++W++ + + LKG+ + F P+
Sbjct: 285 SLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPE 344
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
+ + V I+D ++G
Sbjct: 345 GRFLAMAEPADFVHIFDTQSG 365
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H D VS + +RDG+L+ S S+D +IW T +CL++ + + ++ V S NG I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 453 LAATLDNTLKLW 488
+ D +K+W
Sbjct: 223 YTGSSDQRIKVW 234
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 198
H +S +A S D L+ S S D+TLK+W + KCL++ H + + + + I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 199 VSGSFDESVRIW 234
+GS D+ +++W
Sbjct: 223 YTGSSDQRIKVW 234
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKT---LKGHSNYVFCCNFN 180
+S H GI+ +A S ++ L+ S D ++ VWE G + L+GH+ V C
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV- 313
Query: 181 PQSNLIVSGSFDESVRIW 234
S+++ SGS D++VR+W
Sbjct: 314 -VSDILCSGSADKTVRLW 330
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFCC----- 171
+ GH + +A SD ++ S S DKT+++W+ S+ CL L+GH V C
Sbjct: 301 LRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR 358
Query: 172 ---NFNPQSNLIVSGSFDESVRIWDV 240
+ S I SG D V++W V
Sbjct: 359 DSRKADEASYHIYSGGLDSQVKVWQV 384
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +2
Query: 563 SVTGGKWIVSGSEDNLVYIWNLQSKE---IVQRLSGHTDTVLC 682
S T G + SG D + +W +V L GHT++VLC
Sbjct: 268 SGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLC 310
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
KTI+ K G+ V ++S ++ +S D +L++ L K L+ KGH + V +
Sbjct: 69 KTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSL 128
Query: 178 NPQSNLIVSGSFDESVRIWDVRTGKC 255
+SGS D +V +WD R KC
Sbjct: 129 CSGGECFISGSLDRTVLLWDQRVEKC 154
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVS- 204
IS + + S +V+ASDD ++++++++S CLKT+ K + + C +P + + S
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 95
Query: 205 GSFDESVRIWDVRTGKC*NHYR 270
+D+S+R+ + K +++
Sbjct: 96 NGWDDSLRLLSLHDNKYLRYFK 117
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH---SNYVFCCNFN 180
++ G + V +S+D RL++ + D + V + G L T F+
Sbjct: 200 SVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFS 259
Query: 181 PQSNLIVSGSFDESVRIWDVRTGK 252
P+ +VSGS D S W VR+GK
Sbjct: 260 PEGMFVVSGSGDGSTHAWGVRSGK 283
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV--KFSPNGKYILAA 461
+ V F+ DG L++ ++ DG + D+ G L T S + FSP G ++++
Sbjct: 209 NVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 268
Query: 462 TLDNTLKLWDYSRGK 506
+ D + W GK
Sbjct: 269 SGDGSTHAWGVRSGK 283
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
+S++ F++ + +V++S D R++D AS CLKT I+ V V F+ + ++ ++
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKT-INSKKYGVDLVCFTSHPTTVIYSS 94
Query: 465 ---LDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
D++L+L K R+ + + +VSL
Sbjct: 95 RNGWDDSLRLLSLHDNKYLRYFKGHHDR-VVSL 126
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
D LI + ++ G R++D G + D + VKFS +G+ +L T+D +
Sbjct: 170 DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFI 229
Query: 480 KLWDYSRG 503
+ D RG
Sbjct: 230 HVLDSFRG 237
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
KTI+ K G+ V ++S ++ +S D +L++ L K L+ KGH + V +
Sbjct: 66 KTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSL 125
Query: 178 NPQSNLIVSGSFDESVRIWDVRTGKC 255
+SGS D +V +WD R KC
Sbjct: 126 CSGGECFISGSLDRTVLLWDQRVEKC 151
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVS- 204
IS + + S +V+ASDD ++++++++S CLKT+ K + + C +P + + S
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 92
Query: 205 GSFDESVRIWDVRTGKC*NHYR 270
+D+S+R+ + K +++
Sbjct: 93 NGWDDSLRLLSLHDNKYLRYFK 114
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH---SNYVFCCNFN 180
++ G + V +S+D RL++ + D + V + G L T F+
Sbjct: 197 SVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFS 256
Query: 181 PQSNLIVSGSFDESVRIWDVRTGK 252
P+ +VSGS D S W VR+GK
Sbjct: 257 PEGMFVVSGSGDGSTHAWGVRSGK 280
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV--KFSPNGKYILAA 461
+ V F+ DG L++ ++ DG + D+ G L T S + FSP G ++++
Sbjct: 206 NVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 265
Query: 462 TLDNTLKLWDYSRGK 506
+ D + W GK
Sbjct: 266 SGDGSTHAWGVRSGK 280
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
+S++ F++ + +V++S D R++D AS CLKT I+ V V F+ + ++ ++
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKT-INSKKYGVDLVCFTSHPTTVIYSS 91
Query: 465 ---LDNTLKLWDYSRGKC*RHIRDTRTKNIVSL 554
D++L+L K R+ + + +VSL
Sbjct: 92 RNGWDDSLRLLSLHDNKYLRYFKGHHDR-VVSL 123
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
D LI + ++ G R++D G + D + VKFS +G+ +L T+D +
Sbjct: 167 DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFI 226
Query: 480 KLWDYSRG 503
+ D RG
Sbjct: 227 HVLDSFRG 234
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 50.0 bits (114), Expect = 2e-06
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+D VS + N + L+ S+S+D ++W A +CL+++ D+ S V S +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV--STTEAIV 262
Query: 453 LAATLDNTLKLWDY-SRGKC*RH-IRDTRTKNIVSLPTL-VSLAGSG*YRDQKTTWCTYG 623
+ + D T+K W +GK +H + T TK ++ L VS G+ Y +
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFW 322
Query: 624 TFNQRRLYRGCLDTRIQFSARACHPTENIIASAALENDKTIQLWK 758
++ Y G L + + +++ S + DKTI +WK
Sbjct: 323 EREKQLNYGGILKGH-KLAVLCLEVAGSLVFSGSA--DKTICVWK 364
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H +S ++ + + L+ SAS D+T+KVW ++ KCL+++ H + V ++ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA-IVF 263
Query: 202 SGSFDESVRIW 234
SGS D +V+ W
Sbjct: 264 SGSADGTVKAW 274
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFCCNFNPQ 186
+ GHK+ + + L+ S S DKT+ VW+ CL L GH+ V C
Sbjct: 334 LKGHKLAV--LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEAD 391
Query: 187 SN---------LIVSGSFDESVRIWDV 240
++ SGS D+SV++W V
Sbjct: 392 REASERRDKKWIVYSGSLDKSVKVWGV 418
Score = 35.9 bits (79), Expect = 0.036
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
H++ V C + N + L+ S S+D ++++W + KC
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKC 240
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K H + AW D + S DK K+W L SG T+ H + + P
Sbjct: 66 KASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPG 125
Query: 187 SNLIVSGSFDESVRIWDVR 243
NL+ +GS+D++++ WD R
Sbjct: 126 MNLLATGSWDKTLKYWDTR 144
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCL----KTLKGHSNYVFCCNFNPQSNLI 198
IS +++S + ++V+ S D ++ WE+S SG L K H V C + +
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTV 87
Query: 199 VSGSFDESVRIWDVRTG 249
SG D+ ++W + +G
Sbjct: 88 FSGGCDKQAKMWPLLSG 104
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 398
E S G K +H PV + DG+ + S D ++W SG T+
Sbjct: 53 EISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAM 112
Query: 399 DDNPPVSFVKFSPNGKYILAATLDNTLKLWD 491
+ P++ + + P + + D TLK WD
Sbjct: 113 HEG-PIAAMAWIPGMNLLATGSWDKTLKYWD 142
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 267 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCL----KTLIDDDNPPVSFVKF 431
P+ +D +S++ F+ ++V++S+D R W+ + SG L K I D PV +
Sbjct: 22 PSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQ-PVLCSAW 80
Query: 432 SPNGKYILAATLDNTLKLWDYSRG 503
+G + + D K+W G
Sbjct: 81 KDDGTTVFSGGCDKQAKMWPLLSG 104
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H G++D+A+S+ ++ + + DDKT+KVW+ ++G T +GH Y C ++
Sbjct: 458 IDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYK 517
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 518 ENIQFIFSTALDGKIKAW 535
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 4 EKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC--CN 174
++T G HK + V + + ++A DD ++K W++ + + L +
Sbjct: 589 KRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIR 648
Query: 175 FNPQSNLIVSGSFDESVRI 231
FN + +L+ + D +++
Sbjct: 649 FNKEGSLLAVSANDNMIKV 667
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
F F I G +D+ + I+N++ E+ +L GH+ + TGL
Sbjct: 870 FLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI--TGL 914
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H G++D+A+S+ ++ + + DDKT+KVW+ ++G T +GH Y C ++
Sbjct: 458 IDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYK 517
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 518 ENIQFIFSTALDGKIKAW 535
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 4 EKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC--CN 174
++T G HK + V + + ++A DD ++K W++ + + L +
Sbjct: 589 KRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIR 648
Query: 175 FNPQSNLIVSGSFDESVRI 231
FN + +L+ + D +++
Sbjct: 649 FNKEGSLLAVSANDNMIKV 667
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
F F I G +D+ + I+N++ E+ +L GH+ + TGL
Sbjct: 870 FLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI--TGL 914
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H G++D+++S+ ++ +++ DDKT+KVW+ ++G T +GH Y C ++
Sbjct: 458 IDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYK 517
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 518 ENIQFIFSTALDGKIKAW 535
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 4 EKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC--CN 174
++T G HK + V + + ++A DD ++K W++ + + L + G
Sbjct: 589 KRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIR 648
Query: 175 FNPQSNLI-VSGS 210
FN + +L+ VSG+
Sbjct: 649 FNKEGSLLAVSGN 661
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
F F I G +D+ + I+N++ E+ +L GH+ + TGL
Sbjct: 881 FLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI--TGL 925
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H G++D+++S+ ++ +++ DDKT+KVW+ ++G T +GH Y C ++
Sbjct: 458 IDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYK 517
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 518 ENIQFIFSTALDGKIKAW 535
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 4 EKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC--CN 174
++T G HK + V + + ++A DD ++K W++ + + L + G
Sbjct: 589 KRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIR 648
Query: 175 FNPQSNLI-VSGS 210
FN + +L+ VSG+
Sbjct: 649 FNKEGSLLAVSGN 661
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
F F I G +D+ + I+N++ E+ +L GH+ + TGL
Sbjct: 881 FLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI--TGL 925
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCC 171
++ H+ + DVAW L S DD+ L +W+L S+ K ++++ HS V C
Sbjct: 220 QQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCL 279
Query: 172 NFNPQSNLIV-SGSFDESVRIWDVR 243
FNP + +V +GS D++V+++D+R
Sbjct: 280 AFNPFNEWVVATGSTDKTVKLFDLR 304
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
S D +L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++ RI
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
Query: 232 WDVR 243
WD R
Sbjct: 346 WDTR 349
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
N + + L H D A ++ +G + + D CRIWDT ++ + V
Sbjct: 308 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 367
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSRG 503
++F+ +G+Y+ A + + ++D G
Sbjct: 368 IRFTSDGRYVAMAEPADFVHIYDTKSG 394
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQ 186
T+ GH AW + + + DKT ++W+ + + LKG+ V F
Sbjct: 314 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 373
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
+ + V I+D ++G
Sbjct: 374 GRYVAMAEPADFVHIYDTKSG 394
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 282 PVSAVHFNRDGSLI--VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYI 452
PV+ + DG L+ V DGL + DT++GQ + TL + SF + PNG
Sbjct: 279 PVNHSSLSPDGKLVAVVGDDPDGL--LVDTSNGQTIGTL--KGHLDYSFASAWHPNGVTF 334
Query: 453 LAATLDNTLKLWD 491
D T ++WD
Sbjct: 335 ATGNQDKTCRIWD 347
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
S D +L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++ RI
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
Query: 232 WDVR 243
WD R
Sbjct: 340 WDTR 343
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
N + + L H D A ++ +G + + D CRIWDT ++ + V
Sbjct: 302 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 361
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSRG 503
++F+ +G+Y+ A + + ++D G
Sbjct: 362 IRFTSDGRYVAMAEPADFVHIYDTKSG 388
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQ 186
T+ GH AW + + + DKT ++W+ + + LKG+ V F
Sbjct: 308 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 367
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
+ + V I+D ++G
Sbjct: 368 GRYVAMAEPADFVHIYDTKSG 388
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 282 PVSAVHFNRDGSLI--VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYI 452
PV+ + DG L+ V DGL + DT++GQ + TL + SF + PNG
Sbjct: 273 PVNHSSLSPDGKLVAVVGDDPDGL--LVDTSNGQTIGTL--KGHLDYSFASAWHPNGVTF 328
Query: 453 LAATLDNTLKLWD 491
D T ++WD
Sbjct: 329 ATGNQDKTCRIWD 341
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG---KCLKTLKGHSNYVFCCNFN 180
T++GH ++ + + D+ L+++AS DKT+++W S TLK HS V +
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVH 318
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC 255
+ VS S D + +D+ +G C
Sbjct: 319 ATNKYFVSASLDSTWCFYDLSSGLC 343
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSF 422
++L L HS V+++ F D L++++S D RIW + + + D + V
Sbjct: 255 QILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRA 314
Query: 423 VKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNI 545
V KY ++A+LD+T +D S G C + D ++
Sbjct: 315 VTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDV 355
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +1
Query: 40 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 219
D+ S D +I + D T +++ SG+ L TL GHS V F ++L+++ S D+
Sbjct: 229 DILHSKD--VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDK 286
Query: 220 SVRIW 234
+VRIW
Sbjct: 287 TVRIW 291
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 222 CSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 401
CS+ G N L HS V AV + VS+S D +D +SG CL + D
Sbjct: 293 CSEDG--NYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDA 350
Query: 402 DNPPVSFVK--FSPNGKYILAATLDNTLKLWD 491
V++ F P+G + T + +K+WD
Sbjct: 351 SENDVNYTAAAFHPDGLILGTGTAQSIVKIWD 382
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS----NYVFCCNF 177
T+ H + V + ++ VSAS D T ++LSSG CL + S NY F
Sbjct: 304 TLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYT-AAAF 362
Query: 178 NPQSNLIVSGSFDESVRIWDVRT 246
+P ++ +G+ V+IWDV++
Sbjct: 363 HPDGLILGTGTAQSIVKIWDVKS 385
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/76 (19%), Positives = 37/76 (48%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 195
S + + + A+ D ++ + + +K+W++ S + GH+ + +F+
Sbjct: 351 SENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYF 410
Query: 196 IVSGSFDESVRIWDVR 243
+ + + D VR+WD+R
Sbjct: 411 LATAALD-GVRLWDLR 425
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 180
F + GHK + + WS D R + S +D L VW S + + L H+ V ++
Sbjct: 290 FVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWS 349
Query: 181 P-QSNLIVS--GSFDESVRIWDVRTG 249
P QS+L+ S G+ D +R W+ G
Sbjct: 350 PHQSSLLASGGGTADRCIRFWNTTNG 375
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ ++AWS + IVS + +W+ S + TL GHS V +P IV+G
Sbjct: 387 VCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTG 446
Query: 208 SFDESVRIWDV 240
+ DE++R W+V
Sbjct: 447 AGDETLRFWNV 457
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
T++GH M + +A S D + IV+ + D+TL+ W +
Sbjct: 423 TLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHR 703
+ SG DN + +WN S++ + +L+ HT V PH+
Sbjct: 313 LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQ 352
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
G + V W+ + I + ++VW+ + K ++T+ GH +N S ++
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWN--SRIL 270
Query: 199 VSGSFDESVRIWDVR 243
SGS D ++ D+R
Sbjct: 271 SSGSRDRNILQHDIR 285
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNL 195
H +S ++ + + L+ S S DKTLKVW LS KCL++++ H + + F+ +L
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD---DL 304
Query: 196 IVSGSFDESVRIW 234
+ +GS D ++++W
Sbjct: 305 LFTGSADGTLKVW 317
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H D VS + N + L+ S S+D ++W + +CL+++ D+ ++ V + +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDD-AINTVA-AGFDDLL 305
Query: 453 LAATLDNTLKLWDYS-RGKC*RH 518
+ D TLK+W +GK +H
Sbjct: 306 FTGSADGTLKVWKRELQGKGTKH 328
Score = 35.5 bits (78), Expect = 0.047
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SGKCLKTLKGHSNYVFCCNF- 177
T+ GH++ + +A + L++S DK + VW + S CL L H V C
Sbjct: 376 TLRGHRLAVLCLAAAGS--LVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAV 433
Query: 178 ----------NPQSNLIVSGSFDESVRIWDV 240
Q ++ SGS D+SV++W V
Sbjct: 434 EDDGEGHREKGDQKWIVYSGSLDKSVKVWRV 464
Score = 35.1 bits (77), Expect = 0.062
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
H + V C + N + L+ SGS+D+++++W + KC
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKC 283
Score = 32.3 bits (70), Expect = 0.44
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFC 168
++I H I+ VA D L+ + S D TLKVW+ GK K L N V
Sbjct: 285 ESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTA 343
Query: 169 CNFNPQSNLIVSGSFDESVRIWD 237
N + ++ GS D +V W+
Sbjct: 344 LAVNITAAVVYCGSSDGTVNFWE 366
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/78 (25%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYI 452
S ++ V ++ GS+ +++S DG R++D S +C++++ + V+ F+ + +++
Sbjct: 174 SGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFV 233
Query: 453 LAATLDNTLKLWDYSRGK 506
L++ D+T+KLW+ G+
Sbjct: 234 LSSGKDSTVKLWEIGSGR 251
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLI 198
K ++ ++ D R ++S+ D T+K+WE+ SG+ +K G FN +
Sbjct: 218 KSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFV 277
Query: 199 VS-GSFDESVRIWDVRT 246
+S V WD RT
Sbjct: 278 ISIDEASNEVVTWDART 294
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD---TASGQCLKTLIDDDNPPV 416
R +++ H++P++ + F+ ++++SS+ D + +D T + + K D N V
Sbjct: 74 RPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHN--V 131
Query: 417 SFVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
+ F P+G+++LA T L+D + +C
Sbjct: 132 RSISFHPSGEFLLAGTDHPIPHLYDVNTYQC 162
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK--GHSNYVFCCNFN 180
+T H I+D+ + S +++S++ D +K ++ S + K ++ V +F+
Sbjct: 78 RTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFH 137
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC 255
P +++G+ ++DV T +C
Sbjct: 138 PSGEFLLAGTDHPIPHLYDVNTYQC 162
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----------CLKTLKGHS 153
KT+S HK + +S D + D ++K++E+ K ++T H+
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 84
Query: 154 NYVFCCNFNPQSNLIVSGSFDESVRIWD 237
+ +F+P+S +++S + D ++ +D
Sbjct: 85 EPINDLDFHPRSTILISSAKDNCIKFFD 112
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
KTL H + V C F+P +G D S+++++V
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV 60
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-----------DTASGQCLKTLIDDD 404
K L H V F+ DG + D +++ DT + ++T D
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 84
Query: 405 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
P ++ + F P ++++ DN +K +D+S+
Sbjct: 85 EP-INDLDFHPRSTILISSAKDNCIKFFDFSK 115
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/78 (25%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYI 452
S ++ V ++ GS+ +++S DG R++D S +C++++ + V+ F+ + +++
Sbjct: 266 SGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFV 325
Query: 453 LAATLDNTLKLWDYSRGK 506
L++ D+T+KLW+ G+
Sbjct: 326 LSSGKDSTVKLWEIGSGR 343
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLI 198
K ++ ++ D R ++S+ D T+K+WE+ SG+ +K G FN +
Sbjct: 310 KSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFV 369
Query: 199 VS-GSFDESVRIWDVRT 246
+S V WD RT
Sbjct: 370 ISIDEASNEVVTWDART 386
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD---TASGQCLKTLIDDDNPPV 416
R +++ H++P++ + F+ ++++SS+ D + +D T + + K D N V
Sbjct: 166 RPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHN--V 223
Query: 417 SFVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
+ F P+G+++LA T L+D + +C
Sbjct: 224 RSISFHPSGEFLLAGTDHPIPHLYDVNTYQC 254
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK--GHSNYVFCCNFN 180
+T H I+D+ + S +++S++ D +K ++ S + K ++ V +F+
Sbjct: 170 RTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFH 229
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC 255
P +++G+ ++DV T +C
Sbjct: 230 PSGEFLLAGTDHPIPHLYDVNTYQC 254
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----------CLKTLKGHS 153
KT+S HK + +S D + D ++K++E+ K ++T H+
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 176
Query: 154 NYVFCCNFNPQSNLIVSGSFDESVRIWD 237
+ +F+P+S +++S + D ++ +D
Sbjct: 177 EPINDLDFHPRSTILISSAKDNCIKFFD 204
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
KTL H + V C F+P +G D S+++++V
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV 152
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-----------DTASGQCLKTLIDDD 404
K L H V F+ DG + D +++ DT + ++T D
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 176
Query: 405 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
P ++ + F P ++++ DN +K +D+S+
Sbjct: 177 EP-INDLDFHPRSTILISSAKDNCIKFFDFSK 207
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 ISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP- 183
I H I W+ D ++ ++S DKT+KVW++ S + L L GH V F+P
Sbjct: 188 IPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPH 247
Query: 184 QSNLIVSGSFDESVRIWD 237
+ +LI S S+D SV +WD
Sbjct: 248 RRSLIASCSYDMSVCLWD 265
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+T H + W+ + SAS D TL++W++ + H + C++N
Sbjct: 143 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNK 202
Query: 184 QSN-LIVSGSFDESVRIWDVRT 246
+ ++ + S D++V++WDVR+
Sbjct: 203 YDDCILATSSVDKTVKVWDVRS 224
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 440
+PAH + + +N+ D ++ +SS D ++WD S + +++ V VKFSP+
Sbjct: 188 IPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPH 247
Query: 441 GKYILAA-TLDNTLKLWDY 494
+ ++A+ + D ++ LWDY
Sbjct: 248 RRSLIASCSYDMSVCLWDY 266
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
++ H + V ++ R +++S D T+K+W + ++T K H+ V+ +NP
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 184 Q-SNLIVSGSFDESVRIWDVR 243
+ ++ S S D ++RIWDVR
Sbjct: 160 KHGDVFASASGDCTLRIWDVR 180
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 198
H +S +A S D L+ SAS D++ K+W S KCL ++ K H + + + + +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS-KDGFV 249
Query: 199 VSGSFDESVRIWDVRTGK 252
+GS D+ +++W+ + K
Sbjct: 250 YTGSADKKIKVWNKKDKK 267
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/73 (28%), Positives = 44/73 (60%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H D VS++ ++DGSL+ S+S+D +IW T+ +CL ++ + ++ + S +G ++
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG-FV 249
Query: 453 LAATLDNTLKLWD 491
+ D +K+W+
Sbjct: 250 YTGSADKKIKVWN 262
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSG-------KCLKTLKGHSNYVF 165
T++ H ++ +A S D +++ S + D+++ VWE L +G + L+GH +
Sbjct: 273 TLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIM 332
Query: 166 CCNFNPQSNLIVSGSFDESVRIW 234
C S+L++SGS D+S+R+W
Sbjct: 333 CLAV--ASDLVLSGSADKSLRVW 353
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGKCLKTLKGHSNYVFCCNF 177
+ GH+ I +A +SD L++S S DK+L+VW E CL L+GH+ V
Sbjct: 324 LRGHRKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAV 381
Query: 178 N---PQSN-----LIVSGSFDESVRIWDVR 243
+ SN ++ SGS D S+++W++R
Sbjct: 382 SVSDSDSNSDYSCMVYSGSLDLSLKVWNLR 411
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGK 446
AH D ++A+ ++DG + + S D ++W+ + L + V+ + S +GK
Sbjct: 233 AHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGK 291
Query: 447 YILAATLDNTLKLWD 491
+ + D ++ +W+
Sbjct: 292 VLYSGACDRSILVWE 306
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF--VKFSPNGK 446
HS+ V+ V F DGS ++ S D I+D + + L L DD S V +SP+GK
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 447 YILAATLDNTLKLWDYS 497
+L + D + K+WD S
Sbjct: 246 QVLTVSADKSAKIWDIS 262
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 117
GHK I V+WS D + +++ S DK+ K+W++S
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCC 171
F+ + H ++ V ++ D ++ S DK +++ + + L L GH ++
Sbjct: 179 FKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAV 238
Query: 172 NFNPQSNLIVSGSFDESVRIWDV 240
+++P +++ S D+S +IWD+
Sbjct: 239 SWSPDGKQVLTVSADKSAKIWDI 261
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
IV+ +D + +E K + + HSN+V C F P + ++ S D+ I+D +T
Sbjct: 160 IVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKT 218
Score = 29.5 bits (63), Expect = 3.1
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 411 PVSFVKFSPNGKYILAATLDNTLKLW 488
P + ++SPNG++I + + T+++W
Sbjct: 58 PATVARYSPNGEWIASGDVSGTVRIW 83
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----CLKTLKGHSNYVFCCNF 177
+ GH+ + V+W++ L+ + DK++ +WE+ + + L GHS V +
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 178 NPQSNLIVSGSFDESVRIW 234
+P +++ S S+D +++IW
Sbjct: 148 HPTMDVLFSCSYDNTIKIW 166
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVW----ELSSGKCLKTLK----GHSNYVFC 168
++GH + V W ++ S S D T+K+W E C++TL GHS+ V+
Sbjct: 135 LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 169 CNFNPQSNLIVSGSFDESVRIW 234
+FN + +V+ S D +V+IW
Sbjct: 195 ISFNAAGDKMVTCSDDLAVKIW 216
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK----TLIDDDNPPV 416
E + L H V +V +N GSL+ + D IW+ + + ++ + V
Sbjct: 83 ESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDV 142
Query: 417 SFVKFSPNGKYILAATLDNTLKLW 488
V + P + + + DNT+K+W
Sbjct: 143 KMVLWHPTMDVLFSCSYDNTIKIW 166
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 13 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSS 120
+ GH + +VAW+ + +I S S DKT+++WE SS
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 82 SDDKTLKVWE--LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 243
S D VWE + + + L+GH + V ++N +L+ + D+SV IW+++
Sbjct: 67 SFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQ 122
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +1
Query: 37 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 216
S +A +SD +I D ++K+ K L+T GH V C +P +N +V+GS D
Sbjct: 2630 SVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRD 2689
Query: 217 ESVRIWDV 240
+V +W +
Sbjct: 2690 STVLLWRI 2697
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 467
S + DG +I D ++ + + L+T PV+ + SP+ +++ +
Sbjct: 2630 SVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHC-APVTCLALSPDNNFLVTGSR 2688
Query: 468 DNTLKLW 488
D+T+ LW
Sbjct: 2689 DSTVLLW 2695
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
++ L+GH + CC + ++VS S V + +R G+
Sbjct: 2742 IQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGR 2782
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS- 189
I+G + W + + ++ S S+DK +KVW++++GKC T++ H V +N +
Sbjct: 212 IAGQTLFFLTFNWENRN-IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP 270
Query: 190 NLIVSGSFDESVRIWDVR 243
+++SGS D +V + D R
Sbjct: 271 EVLLSGSRDRTVVLKDGR 288
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Frame = +1
Query: 88 DKTLKVWELSSGK----CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK 252
+ ++++W+L C++ + +F FN ++ N++ SGS D+ V++WDV TGK
Sbjct: 189 ESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGK 248
Query: 253 C 255
C
Sbjct: 249 C 249
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 34 ISDVAWS--SDSRLIVSASDDKTLKVWELSSGKCLKT--LKGHSNYVFCCNFNPQS-NLI 198
+ +AW S+ +VS D T+K ++ + + + H + V ++N + NL+
Sbjct: 303 VEKLAWDPHSEHSFVVSLKDG-TVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLL 361
Query: 199 VSGSFDESVRIWDV 240
+GS DESV++WD+
Sbjct: 362 ATGSADESVKLWDL 375
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
I H +S ++++ + L+ + S D+++K+W+LS+ + N V N N
Sbjct: 341 IHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIATNKPNAVRAMNKNFCC 400
Query: 190 NLIVSGSF 213
++ VSG F
Sbjct: 401 HMFVSGFF 408
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 315 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLW 488
+++ S S D ++WD A+G+C T+ + V++ ++P + +L+ + D T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP--EVLLSGSRDRTVVLK 285
Query: 489 D 491
D
Sbjct: 286 D 286
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/70 (27%), Positives = 40/70 (57%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
++ + S D +L+ D+ + + ++GK L+TL GH ++ F ++P +G+
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 214 DESVRIWDVR 243
D++ R+WD+R
Sbjct: 340 DKTCRVWDIR 349
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L+ L H D A ++ DG + + D CR+WD + T++ + + ++++
Sbjct: 312 LETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYT 371
Query: 435 PNGKYILAATLDNTLKLWDYSRG 503
+GKY+ A + + ++D S G
Sbjct: 372 SDGKYMAMAEPADFVHVYDVSNG 394
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN- 192
GH+ I DVAW + + SA DD L +W+L + + +K H + +FNP +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEW 275
Query: 193 LIVSGSFDESVRIWDVR 243
++ + S D +V ++D+R
Sbjct: 276 VLATASSDSTVALFDLR 292
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSA-SDDKTLKVWELS 117
GHK ISD AW+ D ++S+ ++D +L+VW+++
Sbjct: 362 GHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 16 SGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQS 189
SGH + V+ S S+ +S S D T ++W+ ++ + ++T GH V F P
Sbjct: 201 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 190 NLIVSGSFDESVRIWDVRTG 249
+GS D + R++D+RTG
Sbjct: 261 YRFGTGSDDGTCRLYDIRTG 280
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH + + W+ + IVSAS D L VW + + +K +V C F+P
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 187 SNLIVSGSFDESVRIWDV 240
+ G D I+ +
Sbjct: 119 GQSVACGGLDSVCSIFSL 136
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D + +W+ T +
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ 98
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG 249
+ L GH YV CC + P + +++ S D++ +WDV TG
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Frame = +1
Query: 7 KTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKT-------LKGHSNY 159
+ ++GH+ +S + + D+ LI S S D+T +W++++G LKT GH+
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITS-SGDQTCILWDVTTG--LKTSVFGGEFQSGHTAD 206
Query: 160 VFCCNFNPQS-NLIVSGSFDESVRIWDVR 243
V + + + N +SGS D + R+WD R
Sbjct: 207 VLSVSISGSNPNWFISGSCDSTARLWDTR 235
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 VSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+S S D R+WDT A+ + ++T + V+ VKF P+G + D T +L+D
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Query: 501 G 503
G
Sbjct: 280 G 280
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFS 434
+ L H+ V ++ + + + IVS+S DG +W+ + Q KT I V FS
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFS 116
Query: 435 PNGKYILAATLDNTLKLWDYS 497
PNG+ + LD+ ++ S
Sbjct: 117 PNGQSVACGGLDSVCSIFSLS 137
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Frame = +3
Query: 264 LPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI------DDDNPPVS 419
L H VS + N D LI SS D C +WD +G LKT + V
Sbjct: 152 LTGHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTTG--LKTSVFGGEFQSGHTADVL 208
Query: 420 FVKFS-PNGKYILAATLDNTLKLWD 491
V S N + ++ + D+T +LWD
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWD 233
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK----GHSNYVFCCN 174
+T GH+ ++ V + D + SDD T +++++ +G L+ + G + V
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 175 FNPQSNLIVSG-SFDESVRIWDVRTGK 252
F+ L+ +G + + + +WD G+
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTLLGE 328
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 16 SGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQS 189
SGH + V+ S S+ +S S D T ++W+ ++ + ++T GH V F P
Sbjct: 139 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 198
Query: 190 NLIVSGSFDESVRIWDVRTG 249
+GS D + R++D+RTG
Sbjct: 199 YRFGTGSDDGTCRLYDIRTG 218
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG 249
+ L GH YV CC + P + +++ S D++ +WDV TG
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +1
Query: 49 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 228
W+ + IVSAS D L VW + + +K +V C F+P + G D
Sbjct: 11 WTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCS 70
Query: 229 IWDV 240
I+ +
Sbjct: 71 IFSL 74
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Frame = +1
Query: 7 KTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKT-------LKGHSNY 159
+ ++GH+ +S + + D+ LI S S D+T +W++++G LKT GH+
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITS-SGDQTCILWDVTTG--LKTSVFGGEFQSGHTAD 144
Query: 160 VFCCNFNPQS-NLIVSGSFDESVRIWDVR 243
V + + + N +SGS D + R+WD R
Sbjct: 145 VLSVSISGSNPNWFISGSCDSTARLWDTR 173
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSA-SDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNP 183
G ++ +A+S RL+ + + + T VW+ G+ + L H N + C +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 289
Query: 184 QSNLIVSGSFDESVRIW 234
+ + +GS+D +++IW
Sbjct: 290 DGSALCTGSWDSNLKIW 306
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 VSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+S S D R+WDT A+ + ++T + V+ VKF P+G + D T +L+D
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 217
Query: 501 G 503
G
Sbjct: 218 G 218
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Frame = +3
Query: 264 LPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI------DDDNPPVS 419
L H VS + N D LI SS D C +WD +G LKT + V
Sbjct: 90 LTGHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTTG--LKTSVFGGEFQSGHTADVL 146
Query: 420 FVKFS-PNGKYILAATLDNTLKLWD 491
V S N + ++ + D+T +LWD
Sbjct: 147 SVSISGSNPNWFISGSCDSTARLWD 171
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK----GHSNYVFCCN 174
+T GH+ ++ V + D + SDD T +++++ +G L+ + G + V
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 239
Query: 175 FNPQSNLIVSG-SFDESVRIWDVRTGK 252
F+ L+ +G + + + +WD G+
Sbjct: 240 FSVSGRLLFAGYASNNTCYVWDTLLGE 266
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFSPNGKYILAA 461
V ++ + + + IVS+S DG +W+ + Q KT I V FSPNG+ +
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSPNGQSVACG 63
Query: 462 TLDNTLKLWDYS 497
LD+ ++ S
Sbjct: 64 GLDSVCSIFSLS 75
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 16 SGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQS 189
SGH + V+ S S+ +S S D T ++W+ ++ + ++T GH V F P
Sbjct: 201 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 190 NLIVSGSFDESVRIWDVRTG 249
+GS D + R++D+RTG
Sbjct: 261 YRFGTGSDDGTCRLYDIRTG 280
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH + + W+ + IVSAS D L VW + + +K +V C F+P
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 187 SNLIVSGSFDESVRIWDV 240
+ G D I+ +
Sbjct: 119 GQSVACGGLDSVCSIFSL 136
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 76 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D + +W+ T +
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ 98
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG 249
+ L GH YV CC + P + +++ S D++ +WDV TG
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Frame = +1
Query: 7 KTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKT-------LKGHSNY 159
+ ++GH+ +S + + D+ LI S S D+T +W++++G LKT GH+
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITS-SGDQTCILWDVTTG--LKTSVFGGEFQSGHTAD 206
Query: 160 VFCCNFNPQS-NLIVSGSFDESVRIWDVR 243
V + + + N +SGS D + R+WD R
Sbjct: 207 VLSVSISGSNPNWFISGSCDSTARLWDTR 235
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSA-SDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNP 183
G ++ +A+S RL+ + + + T VW+ G+ + L H N + C +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 351
Query: 184 QSNLIVSGSFDESVRIW 234
+ + +GS+D +++IW
Sbjct: 352 DGSALCTGSWDSNLKIW 368
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 VSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+S S D R+WDT A+ + ++T + V+ VKF P+G + D T +L+D
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Query: 501 G 503
G
Sbjct: 280 G 280
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFS 434
+ L H+ V ++ + + + IVS+S DG +W+ + Q KT I V FS
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFS 116
Query: 435 PNGKYILAATLDNTLKLWDYS 497
PNG+ + LD+ ++ S
Sbjct: 117 PNGQSVACGGLDSVCSIFSLS 137
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Frame = +3
Query: 264 LPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI------DDDNPPVS 419
L H VS + N D LI SS D C +WD +G LKT + V
Sbjct: 152 LTGHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTTG--LKTSVFGGEFQSGHTADVL 208
Query: 420 FVKFS-PNGKYILAATLDNTLKLWD 491
V S N + ++ + D+T +LWD
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWD 233
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK----GHSNYVFCCN 174
+T GH+ ++ V + D + SDD T +++++ +G L+ + G + V
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 175 FNPQSNLIVSG-SFDESVRIWDVRTGK 252
F+ L+ +G + + + +WD G+
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTLLGE 328
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/71 (28%), Positives = 41/71 (57%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
H +S ++ + L+ S+S D T+KVW ++ KCL+++ H + + + +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVF 292
Query: 202 SGSFDESVRIW 234
+GS D +V++W
Sbjct: 293 TGSADGTVKVW 303
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
NR +K H+D VS++ + + L+ SSS+D ++W A +CL+++ D+ S
Sbjct: 226 NRNSVKT--KHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV 283
Query: 423 VKFSPNGKYILAATLDNTLKLWDYS-RGKC*RH 518
+ S + + D T+K+W +GK +H
Sbjct: 284 M--SGFDDLVFTGSADGTVKVWKRELQGKGTKH 314
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSGS 210
++ +A S S ++ S D + WE S LKGH + V C NL++SGS
Sbjct: 327 VTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGI--AGNLLLSGS 384
Query: 211 FDESVRIW 234
D+++ +W
Sbjct: 385 ADKNICVW 392
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +1
Query: 148 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
H++ V + + + L+ S S+D ++++W + KC
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKC 269
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQR-LSGHTDTVLCTGL 691
+ GS D LV W + L GH VLC G+
Sbjct: 339 VYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGI 375
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 49 WSSDSRLI----VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 216
W +D L+ S+ D +VW+L + + + +GH V +F+P + SG D
Sbjct: 134 WKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGED 193
Query: 217 ESVRIWDVRTGK 252
RIWD+R K
Sbjct: 194 NQCRIWDLRMRK 205
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-L 195
GH + V +S + + S +D ++W+L K L + H N V + PQ
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYF 229
Query: 196 IVSGSFDESVRIWDVR 243
+ + S D +V IW R
Sbjct: 230 LATASHDMNVNIWSGR 245
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 309 DGSLI----VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 476
DG+L+ SS +D L R+WD + + + + V V FSPNG ++ + DN
Sbjct: 137 DGTLLQTFKASSGFDSLARVWDLRTARNI-LIFQGHIKQVLSVDFSPNGYHLASGGEDNQ 195
Query: 477 LKLWD 491
++WD
Sbjct: 196 CRIWD 200
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H V +V F+ +G + S D CRIWD + L + N VS VK+ P +Y
Sbjct: 171 HIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVN-LVSQVKYEPQERYF 229
Query: 453 LA-ATLDNTLKLW 488
LA A+ D + +W
Sbjct: 230 LATASHDMNVNIW 242
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILA 458
P++ +RDG ++V+ S G+ ++W+ ++ V+ V FS + + +
Sbjct: 65 PLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLAT 124
Query: 459 ATLDNTLKLW 488
A+ D T K+W
Sbjct: 125 ASTDRTEKIW 134
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 539 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHY 712
K + +FS G + SG EDN IW+L+ ++++ + H + V P +++
Sbjct: 173 KQVLSVDFS-PNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYF 229
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 249 EMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
+M++ H+D ++ + F+ DG ++SSS DG RIWD + + + D P++ +
Sbjct: 548 KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVD--VPITALS 605
Query: 429 FSPNGKYILAATLD-NTLKLW 488
SPN + A D N + LW
Sbjct: 606 LSPNMDVLATAHSDQNGVYLW 626
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/62 (27%), Positives = 37/62 (59%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
L+ + +DD ++++++ + K ++ +GH++ + F+ ++S S D S+RIWDV
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVIL 588
Query: 247 GK 252
K
Sbjct: 589 AK 590
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 285 VSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
V+A+ F+ DG L+ S G+ IW+ + + D + + + F N +++A
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSA 286
Query: 462 TLDNTLKLW 488
+ DN+LK+W
Sbjct: 287 SADNSLKMW 295
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASG--QCLKTLIDDDNPPVSFVKFSP 437
AH + +++F + +++S+S D ++W DT G + L+ PP+ ++F
Sbjct: 266 AHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLC-IRFYS 324
Query: 438 NGKYILAATLDNTLKLW 488
NG++IL+A D +L+
Sbjct: 325 NGRHILSAGQDRAFRLF 341
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVW--ELSSG--KCLKTLKGHSNYVFCCNFNPQS 189
H I + + ++ +++SAS D +LK+W + + G + L+ GHS C F
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 190 NLIVSGSFDESVRIWDV 240
I+S D + R++ V
Sbjct: 327 RHILSAGQDRAFRLFSV 343
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/74 (22%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY-VFCCNFNPQSNL 195
GH I+D+ +S D + ++S+S D +L++W++ K + + H + + + +P ++
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV--HVDVPITALSLSPNMDV 612
Query: 196 IVSGSFDES-VRIW 234
+ + D++ V +W
Sbjct: 613 LATAHSDQNGVYLW 626
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/64 (20%), Positives = 40/64 (62%)
Frame = +3
Query: 300 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 479
++R L+ + + D + R++D + + ++ + ++ + FS +GK+++++++D +L
Sbjct: 523 YHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDR-ITDLCFSEDGKWVISSSMDGSL 581
Query: 480 KLWD 491
++WD
Sbjct: 582 RIWD 585
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
AH V V + +L++S+ Y G ++WD + LK+ D V V NG
Sbjct: 472 AHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRE-LKSQWDVGCSLVKIVYHRVNG-- 528
Query: 450 ILAATLDN-TLKLWDYSRGKC*RHIR 524
+LA D+ ++L+D K R R
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFR 554
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
EK H + VA S + L++SA LKVW+ + LK+ + ++
Sbjct: 467 EKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRE-LKSQWDVGCSLVKIVYHR 525
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC*NHYR 270
+ L+ + + D +R++DV T K +R
Sbjct: 526 VNGLLATVADDFVIRLYDVVTLKMVREFR 554
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/70 (27%), Positives = 39/70 (55%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
++ + S D +L+ D+ + + ++GK L TL GH ++ F ++P +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 214 DESVRIWDVR 243
D++ R+WD+R
Sbjct: 338 DKTCRVWDIR 347
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L L H D A ++ DG + + D CR+WD + ++ + + ++++
Sbjct: 310 LATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYT 369
Query: 435 PNGKYILAATLDNTLKLWDYSRG 503
+GKY+ A + + ++D S G
Sbjct: 370 SDGKYMAMAEPADFVHVYDVSNG 392
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 180
F+ I+ + I +A++ L+ +A DD+ +K+ G ++ LKGH V +F+
Sbjct: 96 FQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFH 155
Query: 181 PQSNLIVSGSFDESVRIWDVRTG 249
P L+ S +V W+++ G
Sbjct: 156 PNGELLASIDTTGTVLCWELQNG 178
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 354 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
++D +G+ L L D + ++ ++PNGKYI + LD + LWD +
Sbjct: 221 MYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDK 269
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H D V+++ + D +L+ S S D +++ SG+ +T I P+ + F+ +G +
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGE-FQTNITRFTLPIRVLAFNGSGSLL 119
Query: 453 LAATLDNTLKL 485
AA D +KL
Sbjct: 120 AAAGDDEGIKL 130
Score = 35.1 bits (77), Expect = 0.062
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDNPPVSF 422
+++ L H PV+ + F+ +G L+ S G W+ +G LK + D S
Sbjct: 138 IVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSI 197
Query: 423 V---KFSPNGKYILAATLDNTLKLWDYSRGK 506
V ++SP+G+ + L N + ++D G+
Sbjct: 198 VNIPRWSPDGRTLAVPGLRNDVVMYDRFTGE 228
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 147
+ + GHK ++ + + + L+ S T+ WEL +G TLKG
Sbjct: 140 RVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKG 186
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H ++D+A+S ++ +V+ +DKT+KVW+ +G L T +GH Y C +
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQK 519
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 520 ENIQFIFSTAVDGKIKAW 537
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I DD +++++ + + LKGH V F+ N++VS D + +W
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Query: 238 V 240
+
Sbjct: 958 M 958
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H ++D+A+S ++ +V+ +DKT+KVW+ +G L T +GH Y C +
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQK 519
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 520 ENIQFIFSTAVDGKIKAW 537
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I DD +++++ + + LKGH V F+ N++VS D + +W
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Query: 238 V 240
+
Sbjct: 958 M 958
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDN-PPVSFVKFSPNG 443
AH+D +++V F+ DG +++S S+DG ++WD + LK N P + V FSP+
Sbjct: 371 AHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDE 430
Query: 444 KYILAAT 464
+ IL T
Sbjct: 431 QIILTGT 437
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCN--FNPQSN 192
H I+ V +SSD R+++S S D +LKVW+L K LK +G NY N F+P
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 193 LIVSGS 210
+I++G+
Sbjct: 432 IILTGT 437
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQSN 192
++ ++ AW D + I D ++++W L G + K H++ + F+
Sbjct: 327 RVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGR 386
Query: 193 LIVSGSFDESVRIWDVRTGK 252
+++S SFD S+++WD+R K
Sbjct: 387 ILLSRSFDGSLKVWDLRQMK 406
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +3
Query: 249 EMLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI---DDDNPP 413
+++KP A PV+ ++RDG I DG +IW G + I
Sbjct: 316 QVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDD 375
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
++ VKFS +G+ +L+ + D +LK+WD + K
Sbjct: 376 ITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWE----LSSGKCLKTLKGHSNY--VF 165
K GH G++ W ++ ++++S+D +L++W+ LS + +K V
Sbjct: 272 KNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVT 331
Query: 166 CCNFNPQSNLIVSGSFDESVRIWDVRTG 249
C ++ I G D S++IW ++ G
Sbjct: 332 TCAWDRDGKRIAGGVGDGSIQIWSLKPG 359
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
LKGH+ V + ++SGS+D +VR++D
Sbjct: 173 LKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE---LSSGKCLK-TLKGHSNYVFCCNF 177
T+ HK ++ +A + D ++ S S D+++ VWE S+ ++ L+GH + F
Sbjct: 275 TLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-F 333
Query: 178 NPQSNLIVSGSFDESVRIW 234
N S+L++SGS D +VRIW
Sbjct: 334 N-VSDLLLSGSADRTVRIW 351
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
I S S DKTLK+W S +C +++K H + V + + + +GS D +R+W TG
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS-TNGTVYTGSADRRIRVWAKPTG 266
Query: 250 K 252
+
Sbjct: 267 E 267
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNP 183
+ GH I + SD L++S S D+T+++W SS CL+ L GH+ V
Sbjct: 322 LRGHDKAILSLFNVSD--LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVR 379
Query: 184 QSNL-----IVSGSFDESVRIWDVRTGKC*NHY 267
+ L I+SGS D V+ W V K N +
Sbjct: 380 EKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK----CLKTLKGHSNYVFCC 171
+++I H ++ +A S++ + + S D+ ++VW +G+ + TL+ H + V
Sbjct: 228 KESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNAL 286
Query: 172 NFNPQSNLIVSGSFDESVRIWD 237
N +++ SGS D S+ +W+
Sbjct: 287 ALNDDGSVLFSGSCDRSILVWE 308
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 204 RQFR*ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASG 374
R+ R G + ++ L H V+A+ N DGS++ S S D +W DT++
Sbjct: 256 RRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNY 315
Query: 375 QCLK-TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
++ L D +S S +L+ + D T+++W
Sbjct: 316 MAVRGALRGHDKAILSLFNVS---DLLLSGSADRTVRIW 351
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
+++GH + + V + + S S DKT+KVW L + +C++TL HS+ V +
Sbjct: 269 SLTGHTLAV--VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVM--SLICWD 324
Query: 190 NLIVSGSFDESVRIW 234
++S S D +V+IW
Sbjct: 325 QFLLSCSLDNTVKIW 339
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
+ GH+ +S +A S S + + S D+TL+VW+ +SG+C LK
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK 190
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 488
+ S S D ++W + QC++TL D + +S + + +++L+ +LDNT+K+W
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWD---QFLLSCSLDNTVKIW 339
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 LKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L W L T L GH V S+ + +GS DE++R+WD +G+C
Sbjct: 132 LHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
E+ +L L H VS + + + S D R+WD ASGQC L
Sbjct: 139 ESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVL 189
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 333 SYDGLCRI---WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRG 503
+Y CR W L T +D VS + + + D TL++WD + G
Sbjct: 124 TYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASG 183
Query: 504 KC 509
+C
Sbjct: 184 QC 185
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 572 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
G + SGS D + +W+L + + +Q L+ H+ V+
Sbjct: 283 GANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVM 318
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSG-KCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
L+ + + D ++ W ++ C + +L GH+ V +N + SGS D+++++W
Sbjct: 242 LLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVW 299
Query: 235 DVRTGKC 255
+ +C
Sbjct: 300 SLDNLQC 306
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH+M ++ VA D+ IVS+S D+TLK W +G+ +++ H + + P
Sbjct: 107 QTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPS 162
Query: 187 SNLIVSGSFDESVRIWDVRT 246
L VSGS D S+++W +T
Sbjct: 163 GEL-VSGSSDASLKLWKGKT 181
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSR-----LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC 168
EK + GH + +AW + +VS S D + VW L +G+ ++TLKGH V
Sbjct: 59 EKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTG 118
Query: 169 CNFNPQSNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQLFISTETG 315
+ + IVS S D++++ W R G+ + Q Q I +G
Sbjct: 119 VAIDNED--IVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSG 163
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 28 MGISDVAWSSD---SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
+G + + +S D S LIVSAS+D+ K+W+ G C+++L+ H ++ F +++
Sbjct: 227 VGHTSLVYSVDAHSSGLIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIV 283
Query: 199 VSGSFDESVRIWDVR 243
+ S D VR+W VR
Sbjct: 284 TACS-DGVVRVWTVR 297
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGH 664
+VSGS D V++WNL + E +Q L GH
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 35.1 bits (77), Expect = 0.062
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGK----CLKTLKGHSNYVFCCNF 177
+ GH + + +D I ++S D+T++VW L S K K L GH+++V +
Sbjct: 16 LHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAW 74
Query: 178 NPQSN-----LIVSGSFDESVRIWDVRTGK 252
P ++ +VSGS D V +W++ G+
Sbjct: 75 IPPTDEYPEGRLVSGSMDTFVFVWNLMNGE 104
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
+VSGS D + +W + K +Q LSGHTDTV
Sbjct: 165 LVSGSSDASLKLW--KGKTSLQTLSGHTDTV 193
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
+T+ GH+M ++ VA D+ IVS+S D+TLK W +G+ +++ H + + P
Sbjct: 107 QTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPS 162
Query: 187 SNLIVSGSFDESVRIWDVRT 246
L VSGS D S+++W +T
Sbjct: 163 GEL-VSGSSDASLKLWKGKT 181
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSR-----LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC 168
EK + GH + +AW + +VS S D + VW L +G+ ++TLKGH V
Sbjct: 59 EKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTG 118
Query: 169 CNFNPQSNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQLFISTETG 315
+ + IVS S D++++ W R G+ + Q Q I +G
Sbjct: 119 VAIDNED--IVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSG 163
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 28 MGISDVAWSSD---SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
+G + + +S D S LIVSAS+D+ K+W+ G C+++L+ H ++ F +++
Sbjct: 227 VGHTSLVYSVDAHSSGLIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIV 283
Query: 199 VSGSFDESVRIWDVR 243
+ S D VR+W VR
Sbjct: 284 TACS-DGVVRVWTVR 297
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGH 664
+VSGS D V++WNL + E +Q L GH
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 35.1 bits (77), Expect = 0.062
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGK----CLKTLKGHSNYVFCCNF 177
+ GH + + +D I ++S D+T++VW L S K K L GH+++V +
Sbjct: 16 LHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAW 74
Query: 178 NPQSN-----LIVSGSFDESVRIWDVRTGK 252
P ++ +VSGS D V +W++ G+
Sbjct: 75 IPPTDEYPEGRLVSGSMDTFVFVWNLMNGE 104
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
+VSGS D + +W + K +Q LSGHTDTV
Sbjct: 165 LVSGSSDASLKLW--KGKTSLQTLSGHTDTV 193
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN- 192
GH+ I+DV+W + L SA +D L +W+ + + +K H V +FNP +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEW 274
Query: 193 LIVSGSFDESVRIWDVR 243
++ + S D +V ++D+R
Sbjct: 275 VLATASSDSTVALFDLR 291
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS 117
GHK ISD AW+ ++ +I S ++D +L+VW+++
Sbjct: 361 GHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
F + GH+ G+S +A + + + I SAS D +++W++SS + + GH V
Sbjct: 48 FVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTA 107
Query: 178 NPQSNLIVSGSFDESVRIWDV 240
+ N++VS D +VR+W+V
Sbjct: 108 STDGNVLVSCGTDCTVRLWNV 128
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLI 198
H + D+ +S R V+ S D++++++ + G + VFC ++ + +
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYV 337
Query: 199 VSGSFDESVRIWDVRTGK 252
+SGS D ++R+W + +
Sbjct: 338 ISGSDDTNLRLWKAKASE 355
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAV---HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 410
+ R++ + H D VSAV F+ G V+ SYD RI+ G +
Sbjct: 264 DGRKLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQ 323
Query: 411 PVSFVKFSPNGKYILAATLDNTLKLW 488
V VK+S + Y+++ + D L+LW
Sbjct: 324 RVFCVKYSCDATYVISGSDDTNLRLW 349
Score = 33.5 bits (73), Expect = 0.19
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 37 SDVAWSSDSRL-IVSASDDKTLKVWE---LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 204
+ +AW+ + + +A++D + ++ L KC+ K H + V +F+P V+
Sbjct: 239 NSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVH--KDHVSAVMDIDFSPTGREFVT 296
Query: 205 GSFDESVRIWDVRTGKC*NHYRRIQIQ 285
GS+D SVRI+ G Y ++Q
Sbjct: 297 GSYDRSVRIFPYNGGHSREIYHTKRMQ 323
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 97 LKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 243
L +W + + +++ + ++ V FNP + NL+ + + D S+ I+D+R
Sbjct: 175 LDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLR 224
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+ +++ DG C +D K + D V + FSP G+ + + D +++++ Y+
Sbjct: 251 LTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNG 310
Query: 501 G 503
G
Sbjct: 311 G 311
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 500 RKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
R + GH++ C+ N + G I S S D + +W++ S+ V + GH V
Sbjct: 46 RPFVGAMDGHRDGVSCMAKNPNYLKG--IFSASMDGDIRLWDISSRRTVCQFPGHQGAV 102
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSSGKCL 132
V +S D+ ++S SDD L++W+ + + L
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASEQL 357
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GHK + +++ SAS D + K+W+ +G L + + H + V C F+ +
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 190 NLIVSGSFDESVRIWDV 240
+++G F++ +R++D+
Sbjct: 115 KYLITGGFEKILRVFDL 131
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 73 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
V+ +D +++++ +GK + KGH V C F P SGS D ++RIW
Sbjct: 244 VAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSS---DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
GH + D+ +S D ++SAS D + +G + T +GH V+ + +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 190 NLIVSGSFDESVRIWDVRTG 249
S S D S ++WD TG
Sbjct: 74 LRAASASADFSAKLWDALTG 93
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLI 198
HK + A+S D++ +++ +K L+V++L+ T + + + I
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTI 160
Query: 199 VSGSFD-ESVRIWDVRTGK 252
+S D VR+WDVR+GK
Sbjct: 161 LSSCTDIGGVRLWDVRSGK 179
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
+ G+ V+ D R++D +G+ + + PV V+F+P G+ + + D T+++
Sbjct: 238 KSGNKFVAGGEDMWVRLFDFHTGKEIGCN-KGHHGPVHCVRFAPTGESYASGSEDGTIRI 296
Query: 486 W 488
W
Sbjct: 297 W 297
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 34 ISDVAW-SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
I + W D ++ S +D +++W++ SGK ++TL+ S V + I +
Sbjct: 148 IRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD 206
Query: 211 FDESVRIWD 237
+V+ WD
Sbjct: 207 -GSTVKFWD 214
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 195
SGHK +S V + S++ L SAS D TL++W++ ++T +GH+N S
Sbjct: 546 SGHKKAVSYVKFLSNNEL-ASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEY 604
Query: 196 IVSGSFDESVRIW 234
+ GS V ++
Sbjct: 605 LACGSETNEVYVY 617
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +1
Query: 46 AWSSD-SR----LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 207
AWS D SR ++VS SDD +KVW + + +N + C +NP SN I G
Sbjct: 466 AWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVG 524
Query: 208 SFDESVRIWDVR 243
S D + +D+R
Sbjct: 525 SADHHIHYYDLR 536
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIR-DTRTKNIVSL 554
VS+VKF N + A+T D+TL+LWD R R T KN V L
Sbjct: 552 VSYVKFLSNNELASAST-DSTLRLWDVKDNLPVRTFRGHTNEKNFVGL 598
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +3
Query: 192 SNCIRQFR*ECSDMGCENREMLKPLPAHS--DPVSAVHFNR-DGSLIVSSSYDGLCRIWD 362
S CI+ F + S + E +M P+ S +S + +N+ + + I SS Y+G+ +WD
Sbjct: 392 SRCIKVF--DFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWD 449
Query: 363 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLW 488
+ Q L + + S V FS +L + D+ +K+W
Sbjct: 450 VTTRQSLMEYEEHEKRAWS-VDFSRTEPSMLVSGSDDCKVKVW 491
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 61 SRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
S I S D + ++L + + L GH V F +N + S S D ++R+WD
Sbjct: 518 SNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFL-SNNELASASTDSTLRLWD 576
Query: 238 VR 243
V+
Sbjct: 577 VK 578
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 500 RKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
R+ L Y H+ + + +FS T +VSGS+D V +W + + V + + +
Sbjct: 453 RQSLMEYEEHEKRAWSV--DFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKAN-IC 509
Query: 680 CTGLPPHRKHY 712
C P +Y
Sbjct: 510 CVKYNPGSSNY 520
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLI 198
H + DV WS ++S D T +++++ G ++ K V F+P + N+
Sbjct: 204 HNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHPDNCNVF 262
Query: 199 VSGSFDESVRIWDVRTGKC*NHYRR 273
+SG S+R+WD+R K + Y R
Sbjct: 263 LSGGSKGSLRLWDIRANKFVHEYVR 287
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 664
K + GH + I NFS G+ + SGS D VY+++ +S ++++L +
Sbjct: 378 KRFEGHWVAGFPIKCNFS-PDGETLASGSSDGSVYMYDYKSTALIKKLKAY 427
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 133 KTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
K +GH + + CNF+P + SGS D SV ++D ++
Sbjct: 378 KRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKS 417
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 82 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
S ++L+ + + L+ KGH + V +P ++ +SGS D SVR+WD+R C
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILA 458
V+ + F+ DG ++ ++ + + D G+ C +L P+ F+P+GKY+L+
Sbjct: 203 VNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIE-ATFTPDGKYVLS 261
Query: 459 ATLDNTLKLWD 491
+ D TL W+
Sbjct: 262 GSGDGTLHAWN 272
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHR 703
GK+++SGS D ++ WN+++ V R + V C P R
Sbjct: 256 GKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRR 298
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 291 AVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
AV +++ G + + G +++D+ G L+ D V+ +KFS +GK +L
Sbjct: 159 AVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLT 218
Query: 462 TLDNTLKLWDYSRGK 506
T +N + + D RG+
Sbjct: 219 TTNNNIYVLDAYRGE 233
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFCCNFNPQ 186
+ G ++D+ +S+D + ++ + + + V + G KC +L+ F P
Sbjct: 196 VGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPD 255
Query: 187 SNLIVSGSFDESVRIWDV 240
++SGS D ++ W++
Sbjct: 256 GKYVLSGSGDGTLHAWNI 273
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 243
+ S SDD ++K+W ++ CL T++ +N V C F+PQ S+L+ GS D +D+R
Sbjct: 812 LASGSDDCSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLR 869
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSG 207
+S V W++ R +++SD D +K+W++++G+ + H + +F+ + SG
Sbjct: 756 LSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASG 815
Query: 208 SFDESVRIWDVRTGKC*NHYRRI 276
S D SV++W++ C R I
Sbjct: 816 SDDCSVKLWNINERNCLGTIRNI 838
Score = 41.9 bits (94), Expect = 5e-04
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLWDYS 497
+ SS YDG+ ++WD +GQ + I+ + S V FS LA+ D+ ++KLW+ +
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWS-VDFSEACPTKLASGSDDCSVKLWNIN 827
Query: 498 RGKC*RHIRDTRTKNIVSLPTLVS--LA-GSG*Y-------RDQKTTWCTYGTFNQRRLY 647
C IR+ V S LA GS + R+ +T WC N+ Y
Sbjct: 828 ERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSY 887
Query: 648 RGCLDTRIQFSA 683
LD +A
Sbjct: 888 AKFLDNETLVTA 899
Score = 36.3 bits (80), Expect = 0.027
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 VSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
V V F+ S L+ S D +D + + ++ N VS+ KF N + A+
Sbjct: 841 VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTAS 900
Query: 462 TLDNTLKLWDYSR 500
T DNTLKLWD +
Sbjct: 901 T-DNTLKLWDLKK 912
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE--------LSSGKCLKTLKGHSNYVFC 168
+SGH +S A D+ +V+AS D TLK+W+ LS+ C T GH+N
Sbjct: 878 LSGHNKAVS-YAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNF 936
Query: 169 CNFNPQSNLIVSGS 210
+ I GS
Sbjct: 937 VGLSTSDGYIACGS 950
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWEL 114
+S V W S ++VSAS + ++KV +L
Sbjct: 990 VSSVCWRKRSNMVVSASSNGSIKVLQL 1016
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH ++ ++ +++ S S DKT+K+W+L++ +C+ TLK H+ V +
Sbjct: 253 SLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV--TSLLCWD 308
Query: 190 NLIVSGSFDESVRIW 234
++S S D ++++W
Sbjct: 309 KCLISSSLDGTIKVW 323
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 434
L L HS V+ F G ++ S S D ++WD + QC+ TL S + +
Sbjct: 251 LTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD 308
Query: 435 PNGKYILAATLDNTLKLWDYS 497
K +++++LD T+K+W YS
Sbjct: 309 ---KCLISSSLDGTIKVWAYS 326
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
SS S L+ A+ D E K L +L+GHS V C F ++ SGS D+++++
Sbjct: 230 SSGSILVWKATTDS-----ESDPFKYLTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIKM 282
Query: 232 WDVRTGKC 255
WD+ T +C
Sbjct: 283 WDLNTLQC 290
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
K L + GH E C F+V GG+ + SGS D + +W+L + + + L HT TV
Sbjct: 249 KYLTSLEGHSGEVTC----FAV-GGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV 301
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
++ GH + +A S + S S D TL+VW+ +SG+C+ ++
Sbjct: 126 SLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI 169
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
M+ L H+ + + + S S DG R+WD SGQC+ ++
Sbjct: 123 MVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI 169
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 357 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIR-DTR 533
W G + ++ N + + + + ++D TL++WD + G+C I D
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAE 174
Query: 534 TKNIVS 551
+++S
Sbjct: 175 AGSLIS 180
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 LKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L W G + +L+GH+ + S+ + S S D ++R+WD +G+C
Sbjct: 112 LHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQC 165
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H ++D+A+++ +R +++ DDK +KVW++S K T +GH Y C ++
Sbjct: 448 IDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHF-TFEGHDAPVYSICPHYK 506
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 507 ENIQFIFSTAIDGKIKAW 524
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 237
D+ +I +D T+ ++ + + LKGH + F+ N++VS D + W
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
Query: 238 VRT 246
+ T
Sbjct: 933 IDT 935
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
F F I G ED+ ++I+N++ E+ +L GH + TGL
Sbjct: 866 FLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRI--TGL 910
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 524 GHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
G + + C+ A +FS G ++I SG +V IW+LQ K +++L GHT T+
Sbjct: 87 GGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTI 138
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 ISDVAWSSD-SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
+S +++S SR I S + +K+W+L C+K LKGH++ + +N + + S S
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Query: 211 FDESVRIWDVRTG 249
+ + ++ +G
Sbjct: 155 VGGDLIVHNLASG 167
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 318 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 497
L+V++ DG +WDT + + + P + V FSP+ + I+ A++ KL+ Y
Sbjct: 193 LLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKII-ASVGMDKKLYTYD 251
Query: 498 RG 503
G
Sbjct: 252 SG 253
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI-------DDDNP 410
+L P+ V++V +N ++ S+ D +W +GQ L T+ D
Sbjct: 35 VLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLW-RKNGQSLGTVPVTGKDGGDSAEE 93
Query: 411 PVSFVKFSPNG-KYILAATLDNTLKLWDYSRGKC*RHIR 524
+S + FS G +YI + +K+WD R C + ++
Sbjct: 94 CLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLK 132
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-----KGHSNYVFC---CNFNPQ- 186
++ V W+ + ++ S +DK + +W +G+ L T+ G + C +F+ +
Sbjct: 46 VNSVKWNHTNLVVASTGEDKKISLWR-KNGQSLGTVPVTGKDGGDSAEECLSAISFSKKG 104
Query: 187 SNLIVSGSFDESVRIWDVRTGKC 255
S I SG + V+IWD++ C
Sbjct: 105 SRYICSGGTGQIVKIWDLQRKLC 127
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT--LKGHSNYVFCCNFN 180
K +G + + D + SS L+V+A DD T+ +W+ ++G+ K LK HS F+
Sbjct: 174 KDPNGQVLRLLDYSRSS-RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSAPTAGVCFS 231
Query: 181 PQS-NLIVSGSFDESVRIWD 237
P + +I S D+ + +D
Sbjct: 232 PSNEKIIASVGMDKKLYTYD 251
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
+I S S DKTLKVW LS KCL+++K H + + + S S D V+IW
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAI--NGLVAGDGRVYSASADGKVKIW 239
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/78 (23%), Positives = 41/78 (52%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H+D +S + + +I S S+D ++W + +CL+++ D+ V + +G+ +
Sbjct: 173 HADSISCLAVH--AGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLV--AGDGR-V 227
Query: 453 LAATLDNTLKLWDYSRGK 506
+A+ D +K+W + K
Sbjct: 228 YSASADGKVKIWGKEKRK 245
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 31 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
GI +A+S + + S D T+K W L G L T+ GH + V + ++ SGS
Sbjct: 588 GIHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV--STLVVVNGVLYSGS 644
Query: 211 FDESVRIWDV 240
+D +VR+W +
Sbjct: 645 WDGTVRLWSL 654
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
+ +GS DN + W+LQ ++ +SGH V
Sbjct: 600 VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV 630
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSS---DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
GH + DVA+S D ++SAS D + +G + T +GH V+ C+ + +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 190 NLIVSGSFDESVRIWDVRTG 249
S S D + +IW+ TG
Sbjct: 69 IRAASASADFTAKIWNALTG 88
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GHK + + ++ SAS D T K+W +G L + + H + V C F+ +
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDT 109
Query: 190 NLIVSGSFDESVRIWDV 240
+ +++G ++ +RI+D+
Sbjct: 110 HRLLTGGMEKILRIFDL 126
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 73 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
++ +D + ++ +G+ + KGH V C + P SGS D +VRIW V
Sbjct: 239 IAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVV 294
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ--RLSGHTDTV 676
GH +C+ GG+ SGSED V IW + S + LSGH V
Sbjct: 263 GHHGPVHCVRY---APGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLC-RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
+ + +SA+ ++ G + S+SYD IWD + G T I +S +K+SP G Y
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGA--GTPIRRGLGGISMLKWSPTGDY 268
Query: 450 ILAATLDNTLKLWD 491
AA D T LW+
Sbjct: 269 FFAARFDGTFCLWE 282
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSAS-DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
IS ++WS R + SAS D + +W++S G +G + ++P + +
Sbjct: 215 ISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLGG-ISMLKWSPTGDYFFAAR 273
Query: 211 FDESVRIWDVRT 246
FD + +W+ T
Sbjct: 274 FDGTFCLWETNT 285
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 180
I H ++D+A++ ++ +V+ DDK +KVW+L SGK L T +GH Y C +
Sbjct: 449 IDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDL-SGKKLFTFEGHEAPVYSICPHQK 507
Query: 181 PQSNLIVSGSFDESVRIW 234
I S + D ++ W
Sbjct: 508 ENIQFIFSTALDGKIKAW 525
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 551 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
F F I G ED+ ++I+N++ E+ +L GH + TGL
Sbjct: 877 FLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHI--TGL 921
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 HKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 195
H+ + + +SS D L+ S SDD ++K+W ++ G + T+K +N + C F ++
Sbjct: 575 HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-ICCVQFPSETGRS 633
Query: 196 IVSGSFDESVRIWDVRTGK 252
+ GS D V +D+R K
Sbjct: 634 LAFGSADHKVYYYDLRNPK 652
Score = 35.9 bits (79), Expect = 0.036
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCC 171
T+ GH +S V + DS +VS+S D TLK+W+LS SG L + GH+N
Sbjct: 657 TMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 172 NFNPQSNLIVSGSFDESVRIW 234
+ I +GS V ++
Sbjct: 716 GLSVSDGYIATGSETNEVFVY 736
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYS 497
VS+V+F + + ++T DNTLKLWD S
Sbjct: 665 VSYVRFVDSSTLVSSST-DNTLKLWDLS 691
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 HKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 195
H+ + + +SS D L+ S SDD ++K+W ++ G + T+K +N + C F ++
Sbjct: 575 HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-ICCVQFPSETGRS 633
Query: 196 IVSGSFDESVRIWDVRTGK 252
+ GS D V +D+R K
Sbjct: 634 LAFGSADHKVYYYDLRNPK 652
Score = 35.9 bits (79), Expect = 0.036
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCC 171
T+ GH +S V + DS +VS+S D TLK+W+LS SG L + GH+N
Sbjct: 657 TMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 172 NFNPQSNLIVSGSFDESVRIW 234
+ I +GS V ++
Sbjct: 716 GLSVSDGYIATGSETNEVFVY 736
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYS 497
VS+V+F + + ++T DNTLKLWD S
Sbjct: 665 VSYVRFVDSSTLVSSST-DNTLKLWDLS 691
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GHK + +++ SAS D + K+W+ +G L + + H + V C F+ +
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 190 NLIVSGSFDESVRIWDV 240
+++G F++ +R++D+
Sbjct: 115 KSLLTGGFEKILRVFDM 131
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 73 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
V+ +D ++V++ +G+ + KGH V C F P SGS D ++RIW
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSS---DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
GH + D+ +S D ++SAS D + +G + T +GH V+ + +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 190 NLIVSGSFDESVRIWDVRTG 249
S S D S ++WD TG
Sbjct: 74 LRAASASADFSAKLWDALTG 93
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS-NYVFCCNFNPQSNLI 198
HK + A+S D++ +++ +K L+V++++ T S + + I
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 199 VSGSFD-ESVRIWDVRTGK 252
+S D VR+WDVR+GK
Sbjct: 161 LSSCTDIGGVRLWDVRSGK 179
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 34 ISDVAW-SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
I + W SD ++ S +D +++W++ SGK ++TL+ S V + I +
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD 206
Query: 211 FDESVRIWD 237
+V+ WD
Sbjct: 207 -GSTVKFWD 214
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
+ G V+ D R++D +G+ + + PV V+F+P G + + D T+++
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCN-KGHHGPVHCVRFTPTGLSYASGSEDGTIRI 296
Query: 486 W 488
W
Sbjct: 297 W 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T GHK + +++ SAS D + K+W+ +G L + + H + V C F+ +
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 190 NLIVSGSFDESVRIWDV 240
+++G F++ +R++D+
Sbjct: 115 KSLLTGGFEKILRVFDM 131
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 73 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
V+ +D ++V++ +G+ + KGH V C F P SGS D ++RIW
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSS---DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
GH + D+ +S D ++SAS D + +G + T +GH V+ + +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 190 NLIVSGSFDESVRIWDVRTG 249
S S D S ++WD TG
Sbjct: 74 LRAASASADFSAKLWDALTG 93
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS-NYVFCCNFNPQSNLI 198
HK + A+S D++ +++ +K L+V++++ T S + + I
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 199 VSGSFD-ESVRIWDVRTGK 252
+S D VR+WDVR+GK
Sbjct: 161 LSSCTDIGGVRLWDVRSGK 179
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 34 ISDVAW-SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
I + W SD ++ S +D +++W++ SGK ++TL+ S V + I +
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD 206
Query: 211 FDESVRIWD 237
+V+ WD
Sbjct: 207 -GSTVKFWD 214
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +3
Query: 306 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 485
+ G V+ D R++D +G+ + + PV V+F+P G + + D T+++
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCN-KGHHGPVHCVRFTPTGLSYASGSEDGTIRI 296
Query: 486 W 488
W
Sbjct: 297 W 297
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-------SGKCLKTLKGHSNYVFCC 171
+ H + ++ + +S D L++S S D+ V+ + S K + ++ H ++ C
Sbjct: 643 LQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWAC 702
Query: 172 NFNPQSNLIVSGSFDESVRIWDV 240
++NP + + S D++V+IW V
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSV 725
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 108
+K SGH ++DV W+ ++S S D+T +V+
Sbjct: 408 QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
+ HK I +W+ ++S DKT+K+W + + +K +
Sbjct: 692 VEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQI 734
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LI 198
++ +S +A S LI + +DD +++ +++SG TL GH + V ++ S ++
Sbjct: 149 YRTAMSSMAMSHT--LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVL 206
Query: 199 VSGSFDESVRIWDVRTGKC 255
+G D ++R WD+R C
Sbjct: 207 YTGGCDGAIRFWDIRRAGC 225
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTL 141
F T+SGH+ G+ V WS+ S ++ + D ++ W++ C + L
Sbjct: 182 FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
+SD +V KT+K + + SG+ L+GH V C FN + + D + +
Sbjct: 366 TSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIV 425
Query: 232 W 234
W
Sbjct: 426 W 426
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +1
Query: 112 LSSGKCLKTLK-----GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK 252
++ KC+ T++ GH + + P + + ++GSFD V++WD T +
Sbjct: 85 IAKHKCIFTVRKQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQ 137
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFC 168
+T GH + + WS + + S +D + +W+ S+ + L L+ H++ V
Sbjct: 260 ETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKA 319
Query: 169 CNFNP-QSNLIVS--GSFDESVRIWDVRTGKC*N 261
+ P Q+NL+ + G D +++ W+ TG C N
Sbjct: 320 LAWCPFQANLLATGGGGGDRTIKFWNTHTGACLN 353
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/79 (20%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 497
+++ + D +WD ++G + + ID++ PV+ + ++P+G+++ ++ ++LWD +
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 498 RGKC*RHIRDTRTKNIVSL 554
+ R ++ + SL
Sbjct: 213 SNRQLRTLKGGHQSRVGSL 231
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 186
TI K ++ + W+ D R + ++ +++W+ +S + L+TLK GH + V +N
Sbjct: 177 TIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-- 234
Query: 187 SNLIVSGSFDESVRIWDVR 243
++++ +G D + DVR
Sbjct: 235 NHILTTGGMDGLIINNDVR 253
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ + WS + R ++S+ L +W+ S + L GH++ V +P + S
Sbjct: 361 VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASA 420
Query: 208 SFDESVRIWDV 240
+ DE++R W+V
Sbjct: 421 AGDETLRFWNV 431
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ + +AW++ L D + ++T +GH+ V ++ +
Sbjct: 223 GHQSRVGSLAWNNHI-LTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQL 281
Query: 199 VSGSFDESVRIWD 237
SG D V IWD
Sbjct: 282 ASGGNDNVVHIWD 294
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL------QSKEIVQRLSGHT 667
+++TY GH E + + S G+ + SG DN+V+IW+ + + + RL HT
Sbjct: 258 IVETYRGHTQEVCGLKWSGS---GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHT 314
Query: 668 DTV 676
V
Sbjct: 315 SAV 317
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
++GH + +A S D + SA+ D+TL+ W +
Sbjct: 398 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFC 168
+T GH + + WS + + S +D + +W+ S+ + L L+ H++ V
Sbjct: 250 ETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKA 309
Query: 169 CNFNP-QSNLIVS--GSFDESVRIWDVRTGKC*N 261
+ P Q+NL+ + G D +++ W+ TG C N
Sbjct: 310 LAWCPFQANLLATGGGGGDRTIKFWNTHTGACLN 343
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/79 (20%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 497
+++ + D +WD ++G + + ID++ PV+ + ++P+G+++ ++ ++LWD +
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 498 RGKC*RHIRDTRTKNIVSL 554
+ R ++ + SL
Sbjct: 203 SNRQLRTLKGGHQSRVGSL 221
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 186
TI K ++ + W+ D R + ++ +++W+ +S + L+TLK GH + V +N
Sbjct: 167 TIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-- 224
Query: 187 SNLIVSGSFDESVRIWDVR 243
++++ +G D + DVR
Sbjct: 225 NHILTTGGMDGLIINNDVR 243
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ + WS + R ++S+ L +W+ S + L GH++ V +P + S
Sbjct: 351 VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASA 410
Query: 208 SFDESVRIWDV 240
+ DE++R W+V
Sbjct: 411 AGDETLRFWNV 421
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ + +AW++ L D + ++T +GH+ V ++ +
Sbjct: 213 GHQSRVGSLAWNNHI-LTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQL 271
Query: 199 VSGSFDESVRIWD 237
SG D V IWD
Sbjct: 272 ASGGNDNVVHIWD 284
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL------QSKEIVQRLSGHT 667
+++TY GH E + + S G+ + SG DN+V+IW+ + + + RL HT
Sbjct: 248 IVETYRGHTQEVCGLKWSGS---GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHT 304
Query: 668 DTV 676
V
Sbjct: 305 SAV 307
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
++GH + +A S D + SA+ D+TL+ W +
Sbjct: 388 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS- 189
+ GHK I + WSSD+R + S +D L VW S + + H+ V ++P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 190 NLIVS--GSFDESVRIWDVRT 246
L+ S G+ D +R W+ T
Sbjct: 348 GLLASGGGTADRCIRFWNTTT 368
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ ++ WS + +VS + VW+ + L TL GHS V +P IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 208 SFDESVRIWDV 240
+ DE++R W+V
Sbjct: 441 AGDETLRFWNV 451
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNP 183
+T+ GH++ + +AWSS ++ S S DK++ ++ + + + LKGH + + ++
Sbjct: 245 RTMEGHRLRVGALAWSSS--VLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSS 302
Query: 184 QSNLIVSGSFDESVRIWD 237
+ + SG D + +W+
Sbjct: 303 DNRELASGGNDNKLFVWN 320
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/71 (25%), Positives = 39/71 (54%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
+ V W+ + + T+++W++ K ++T++GH V ++ S+++ SGS
Sbjct: 212 VCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSR 269
Query: 214 DESVRIWDVRT 246
D+S+ D+RT
Sbjct: 270 DKSILQRDIRT 280
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 584 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPH 700
+ SG DN +++WN S + V R H V PH
Sbjct: 307 LASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPH 345
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
T++GH + +A S D + IV+ + D+TL+ W +
Sbjct: 417 TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH ++ ++ S I S S D ++++WE+ +G+CLK + + C +NP S L
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWNPLSRLP 479
Query: 199 V 201
V
Sbjct: 480 V 480
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 127 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
C KGH+ V + + I SGS D SVR+W+V TG+C
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRC 457
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 386
H+ V+++ + G I S S DG R+W+ +G+CLK
Sbjct: 422 HTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW------ELSSGKC---LKTLKGHSNY 159
KT+ H I++VA L S S+D T V+ +L+ L+ L+GHS+
Sbjct: 665 KTLKNHPKDITNVAVHRSYPLFASCSEDSTAYVFHGMVYNDLNQNPLIVPLEILRGHSSK 724
Query: 160 --VFCCNFNPQSNLIVSGSFDESVRIW 234
V C F+P+ + + D ++++
Sbjct: 725 GGVLDCKFHPRQPWLFTAGADSIIKLY 751
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 518 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
Y GH I + S G+WI SGS D V +W +++ + ++ + ++C P
Sbjct: 419 YKGHTGAVTSISTDSS---GEWIASGSTDGSVRMWEVETGRCL-KVWQFDEAIMCVAWNP 474
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ I+ +A S I S S D ++++W+ SS KC+KTL+ HS++V+ P +
Sbjct: 255 GHEGPITSLALDMTS--IFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVW--GLAPHETTL 309
Query: 199 VSGSFDESVRIWDV 240
S S V IWDV
Sbjct: 310 ASTS-GSDVYIWDV 322
Score = 35.1 bits (77), Expect = 0.062
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
H P++++ D + I S S+D RIWD +S +C+KTL D +V +
Sbjct: 256 HEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSD-----WVWGLAPHETT 308
Query: 453 LAATLDNTLKLWDYS 497
LA+T + + +WD S
Sbjct: 309 LASTSGSDVYIWDVS 323
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 374
R + L H++ V V L+ +S YD + R+WD G
Sbjct: 152 RYSIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Frame = +1
Query: 28 MGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGH----SNYVFCCNFNPQSN 192
+G + A ++D++L+V+ D + W+ G + L L G + + + P ++
Sbjct: 203 LGCTIRALAADTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITS 262
Query: 193 L------IVSGSFDESVRIWDVRTGKC 255
L I SGS+D SVRIWD + KC
Sbjct: 263 LALDMTSIFSGSWDMSVRIWDRSSMKC 289
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 130 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
+ TL GH+ V + L+ + +D VR+WD+ G
Sbjct: 155 IDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/75 (18%), Positives = 33/75 (44%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH + V + ++L+ ++ D +++W++ G + K + +
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRA--LAADT 214
Query: 190 NLIVSGSFDESVRIW 234
L+V+G D + W
Sbjct: 215 KLLVAGGTDGFIHCW 229
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFN 180
+K + HK ++ V++++D +++S SDD+ + +W+ + L GH N +F F
Sbjct: 48 DKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFM 107
Query: 181 PQSN--LIVSGSFDESVR 228
P S+ IV+ + D+ VR
Sbjct: 108 PFSDDRTIVTSAADKQVR 125
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 497 QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
+R + Y H N + NF +++VSGS+ ++IW + E+++ + V
Sbjct: 296 ERMTPQVYKEHTNRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVV 355
Query: 677 LCTGLPPH 700
C PH
Sbjct: 356 NCIESHPH 363
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
K L H V +FN ++++SGS D V +WD +T
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQT 86
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 362
K L H V+ V FN DG +++S S D +WD
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE--------LSSGKCLKTLKGHSN 156
T++GH+ +S V + DS IVSAS D +LK+W LS G C T KGH+N
Sbjct: 889 TLAGHEKAVSYVKFM-DSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTN 944
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 55 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRI 231
SD VS SDD ++K+W ++ + L T+ +N V C F+ SN L+ GS D V
Sbjct: 819 SDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYC 877
Query: 232 WDVR 243
+D+R
Sbjct: 878 YDLR 881
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 195
+K +S V W+S + ++++D D +++W+ +G+ H + +F+P
Sbjct: 764 NKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTK 823
Query: 196 IVSGSFDESVRIWDV 240
VSGS D SV++W +
Sbjct: 824 FVSGSDDCSVKLWSI 838
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLW 488
+ S+ YDG+ +IWD +GQ + S V FSP+ ++ + D ++KLW
Sbjct: 781 LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWS-VDFSPSDPTKFVSGSDDCSVKLW 836
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSR 500
VS+VKF + + I++A+ DN+LKLW+ ++
Sbjct: 897 VSYVKFM-DSETIVSASTDNSLKLWNLNK 924
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/73 (21%), Positives = 40/73 (54%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
I+ +A+S+D + + D L++++ S+ K + +K + + CC ++ +++G
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 214 DESVRIWDVRTGK 252
D+ V++W + K
Sbjct: 366 DDLVQVWSMEDRK 378
Score = 35.9 bits (79), Expect = 0.036
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
GK++++G ED+LV +W+++ +++V GH V
Sbjct: 357 GKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 162
AWS D + +++ +D ++VW + K + +GH+++V
Sbjct: 352 AWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
++++ F+ DG+ + + DG RI+D ++ Q L + + +S +GKY+L
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFST-QKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 465 LDNTLKLW 488
D+ +++W
Sbjct: 365 EDDLVQVW 372
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ ++AWS + +VS + VW+ + + TL GH+ V +P IV+G
Sbjct: 424 VCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTG 483
Query: 208 SFDESVRIWDV 240
+ DE++R W+V
Sbjct: 484 AGDETLRFWNV 494
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-S 189
++GHK + + WS D+R + S +D L VW S + + H+ V ++P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 190 NLIVS--GSFDESVRIWDVRT 246
L+ S G+ D +R W+ T
Sbjct: 391 GLLASGGGTADRCIRFWNTTT 411
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 497 QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
Q + GHK+E + ++ + + SG DN +++WN S + V + S HT V
Sbjct: 324 QEDHVSKLAGHKSEVCGLKWSYD---NRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAV 380
Query: 677 LCTGLPPH 700
PH
Sbjct: 381 KAIAWSPH 388
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNP 183
+T+ GH++ + +AW S ++ S S DK++ ++ + + L GH + V ++
Sbjct: 288 RTMEGHRLRVGALAWGSS--VLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSY 345
Query: 184 QSNLIVSGSFDESVRIWD 237
+ + SG D + +W+
Sbjct: 346 DNRELASGGNDNRLFVWN 363
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 19 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 195
G + + V W+ + L V S K +++W+ S K +T++GH V + S++
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGK-VQIWDASRCKRTRTMEGHRLRVGALAWG--SSV 306
Query: 196 IVSGSFDESVRIWDVR 243
+ SGS D+S+ D+R
Sbjct: 307 LSSGSRDKSILQRDIR 322
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
T++GH + +A S D + IV+ + D+TL+ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NP 183
TIS K ++ + W D + I +D T+ + ++ +GK L+ LK H V C N+ +
Sbjct: 60 TISPGKP-VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDG 118
Query: 184 QSNLIVSGSF 213
QSN SG+F
Sbjct: 119 QSNTDESGNF 128
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 411 PVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIR 524
PV+ + + P+GK I D T+ L D GK R+++
Sbjct: 66 PVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLK 103
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
L+ S D +++VW ++ L +K H + V C + + ++SGS D+++R+W +
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
Query: 241 RTGK 252
GK
Sbjct: 925 VKGK 928
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK--CLKTLK 144
I HK ++ + S ++S S DKT++VW++ GK C + +K
Sbjct: 891 IKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIK 936
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 276 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSPNGK 446
S V+A+ +++ L+ S DG R+W+ + + TL I + V+ S G+
Sbjct: 853 SGAVTALIYHK--GLLFSGFSDGSIRVWNV--NKKIATLLWDIKEHKSTVTCFSLSETGE 908
Query: 447 YILAATLDNTLKLWDYSRGK 506
+L+ + D T+++W +GK
Sbjct: 909 CVLSGSADKTIRVWQIVKGK 928
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS----GKCLKTL 141
GHK I V+WS DS+ +++ S DK+ KVWE++ G +KTL
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTL 138
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF--VKFSPNGK 446
HS+ V+ + ++ DG+ ++ S D I+D +G + L +D S V +SP+ K
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 447 YILAATLDNTLKLWD 491
+L + D + K+W+
Sbjct: 110 RVLTVSADKSAKVWE 124
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCC 171
F + H ++ + +S D ++ S DK +++ +G + L GH ++
Sbjct: 43 FHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAV 102
Query: 172 NFNPQSNLIVSGSFDESVRIWDV 240
+++P S +++ S D+S ++W+V
Sbjct: 103 SWSPDSKRVLTVSADKSAKVWEV 125
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 70 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
I + +D + ++ K + + HSN+V C ++P ++ S D+ I+D +TG
Sbjct: 24 IATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 83
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 201
++ +S +A S LI + ++D +++ +++SG TL GH + V ++ S ++
Sbjct: 149 YRTAMSSMAMSHT--LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVL 206
Query: 202 -SGSFDESVRIWDVRTGKC 255
+G D ++R WD+R C
Sbjct: 207 YTGGCDGAIRFWDIRRAGC 225
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 16 SGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLK--GHSNYVFCCNFNPQ 186
+GHK IS W D+ L ++ S D LKVW+ ++ + + K G +
Sbjct: 100 NGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMS 159
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
LI +G+ D VR+ D+ +G
Sbjct: 160 HTLIAAGTEDVQVRLCDIASG 180
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 FEKTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTL 141
F T+SGH+ G+ V WS+ S ++ + D ++ W++ C + L
Sbjct: 182 FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
+SD +V KT+K + + SG+ L+GH V C FN + + D + +
Sbjct: 366 TSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILV 425
Query: 232 W 234
W
Sbjct: 426 W 426
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 377
AH V+ + DG ++S+ D R+WD SG+
Sbjct: 310 AHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
V+ +K + +G Y+L+A D+ ++LWD G+
Sbjct: 315 VTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +1
Query: 112 LSSGKCLKTL-----KGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK 252
++ KC+ T+ GH + + P + L ++GSFD +++WD T +
Sbjct: 85 IAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQ 137
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 383
SA+ + D L ++ S+D ++WDT + Q +
Sbjct: 108 SAIWYPIDTGLFITGSFDHYLKVWDTNTAQAV 139
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +1
Query: 55 SDSRLIVSASDDKTLKVWEL----SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDE 219
++ L+ + SDD W++ + + + K H+ V C + NP I +GS+DE
Sbjct: 174 NNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDE 233
Query: 220 SVRIWDVRT 246
++R+WD R+
Sbjct: 234 TLRVWDTRS 242
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH G + ++ S S DKT+KVW+L++ +C TLK H V +
Sbjct: 306 SLEGHHSG-EVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTV--TSLLCWD 362
Query: 190 NLIVSGSFDESVRIW 234
++S S D ++++W
Sbjct: 363 KCLISSSLDGTIKLW 377
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
+ GHK I +A S + S S D TL +W+ +SG+C++++
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI 225
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/100 (29%), Positives = 50/100 (50%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
HS V+ F G ++ S S D ++WD + QC TL S + + K +
Sbjct: 311 HSGEVTC--FVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWD---KCL 365
Query: 453 LAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSLPTLVSL 572
++++LD T+KLW S + + ++ TR K +S+ TL +
Sbjct: 366 ISSSLDGTIKLWACSENESLKVVQ-TR-KQELSVHTLCGM 403
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSG-----KCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
A ++ + ++ + + ++ VW+ + K L +L+GH + C F ++ SGS
Sbjct: 271 AMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTC-FVVGGEVLYSGS 329
Query: 211 FDESVRIWDVRTGKC 255
D+++++WD+ T +C
Sbjct: 330 VDKTIKVWDLNTLQC 344
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
M+ L H + + + + + S S DG IWD SGQC++++
Sbjct: 179 MVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI 225
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
K L + GH + + F V GG+ + SGS D + +W+L + + L H TV
Sbjct: 302 KYLTSLEGHHSGEVTCF----VVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTV 355
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +1
Query: 97 LKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC*NHYRR 273
L W G + L+GH N + S+ + S S D ++ IWD +G+C R
Sbjct: 168 LHSWSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQC---VRS 224
Query: 274 IQIQFQLFISTETGA*SFLQVMMVYVEFGIQLQDNV 381
I +Q + G FL + F +Q +V
Sbjct: 225 INLQAEAGSLISEGPWVFLGLPNAVKAFNVQNSKDV 260
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
T+ GH +S V + D +V+A D LK+W + G+ ++T +GH N +
Sbjct: 108 TLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWR 166
Query: 190 N--LIVSGSFDESVRIWDVRTGK 252
N L GS + V ++D R GK
Sbjct: 167 NGALFGCGSENNRVFVYDRRWGK 189
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--P 437
L H+ VS V F DG +V++ DG ++W G+ ++T N +FV S
Sbjct: 109 LQGHTKTVSYVRF-LDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNR-NFVGLSVWR 166
Query: 438 NGKYILAATLDNTLKLWDYSRGK 506
NG + +N + ++D GK
Sbjct: 167 NGALFGCGSENNRVFVYDRRWGK 189
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPPHRKHYRFGC 724
G +V+ D + +W+++ +++ GH + GL R FGC
Sbjct: 124 GGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGC 173
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP 183
K + HK ++ V+++++ +++S SDD+ + +W+ G L GH+N VF F P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 184 QSN--LIVSGSFDESVR 228
S+ IV+ + D VR
Sbjct: 113 FSDDRTIVTCAADGMVR 129
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 518 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGLPP 697
Y GHKN + NF +++VSGS+ ++IW + E+++ + V C P
Sbjct: 327 YKGHKNCETVKGVNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHP 386
Query: 698 H 700
H
Sbjct: 387 H 387
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 133 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
K L+ H V +FN + ++++SGS D V +WD + G
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLG 91
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWE 111
H+ ++D+A SSD VSASDD T+KVW+
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNP-- 183
++GH+ ++ V ++S ++VS SDD+ + +W LS + L GH VF F P
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 184 QSNLIVSGSFDESVRIWDV 240
I++ D VR+ +
Sbjct: 111 DDRTIITSGADGQVRLGQI 129
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 512 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTGL 691
+ Y GH+N + NF +++ SGS+ ++IW + ++V+ + G V
Sbjct: 312 QVYIGHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLES 371
Query: 692 PPH 700
PH
Sbjct: 372 HPH 374
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 249
L GH V FN +++VSGS D + +W+ +G
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 503 KMLKTYTGHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIWN-LQSKEIVQRLSGHTDTV 676
K L Y + C+ A F+ TG +VSGS+D + +WN L + SGH + V
Sbjct: 43 KKLDLYGKLNGHEGCVNAVEFNSTGDV-LVSGSDDRQIMLWNWLSGSRKLSYPSGHCENV 101
Query: 677 LCTGLPP 697
T P
Sbjct: 102 FQTKFIP 108
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 374
L H V+AV FN G ++VS S D +W+ SG
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 115 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
S G+ + +L GH+ V + P+ ++I S S+D SVR WDV TGK
Sbjct: 260 SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGK 304
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQS 189
G + DV S S LI + D L+VW+ + + HS+++ C ++ S
Sbjct: 312 GKALNTVDVGGES-SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSS 370
Query: 190 NL-IVSGSFDESVRIWDVRTGKC*NH 264
++S S+D + +WD+RT H
Sbjct: 371 WFHLLSASYDGKIMLWDLRTAVMTKH 396
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQ 186
++ GH +S V W +I S+S D +++ W++ +GK L G +
Sbjct: 267 SLVGHTQCVSSVVWPEHD-VIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GES 324
Query: 187 SNLIVSGSFDESVRIWDVR 243
S LI +G D +R+WD R
Sbjct: 325 SALIAAGGSDPILRVWDPR 343
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Frame = +1
Query: 13 ISGHKMGISDVAW--SSDSRLIV--SASDDKTLKVWELSSGKCL---------KTLKGHS 153
+ GH IS VA S+D+ + +AS D+TL++++ + + K L+GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 154 NYVFCCNFNPQSNLIVSGSFDESVRIWD 237
V + N++ S S+D ++ +W+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 446
H D VSAV+ I++ YDGL R+W +A G C +++ + +S V S + +
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVWSSA-GSC-SHILEGHSGAISSVALVNSNDAE 165
Query: 447 YILAATL--DNTLKLWDY 494
+ AT D TL+L+ +
Sbjct: 166 TVTVATASKDRTLRLFKF 183
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 365
K L H V +V + G+++ SSS+D +W+T
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 115 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 252
S G+ + +L GH+ V + P+ ++I S S+D SVR WDV TGK
Sbjct: 260 SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGK 304
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQS 189
G + DV S S LI + D L+VW+ + + HS+++ C ++ S
Sbjct: 312 GKALNTVDVGGES-SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSS 370
Query: 190 NL-IVSGSFDESVRIWDVRT 246
++S S+D + +WD+RT
Sbjct: 371 WFHLLSASYDGKIMLWDLRT 390
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQ 186
++ GH +S V W +I S+S D +++ W++ +GK L G +
Sbjct: 267 SLVGHTQCVSSVVWPEHD-VIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GES 324
Query: 187 SNLIVSGSFDESVRIWDVR 243
S LI +G D +R+WD R
Sbjct: 325 SALIAAGGSDPILRVWDPR 343
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Frame = +1
Query: 13 ISGHKMGISDVAW--SSDSRLIV--SASDDKTLKVWELSSGKCL---------KTLKGHS 153
+ GH IS VA S+D+ + +AS D+TL++++ + + K L+GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 154 NYVFCCNFNPQSNLIVSGSFDESVRIWD 237
V + N++ S S+D ++ +W+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRL-IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 192
S H IS W S ++SAS D + +W+L + L + H++ V ++ +
Sbjct: 355 SSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGE 413
Query: 193 LIVSGSFDESVRI 231
+VSG D ++RI
Sbjct: 414 SVVSGGADSNLRI 426
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 446
H D VSAV+ I++ YDGL R+W +A G C +++ + +S V S + +
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVWSSA-GSC-SHILEGHSGAISSVALVNSNDAE 165
Query: 447 YILAATL--DNTLKLWDY 494
+ AT D TL+L+ +
Sbjct: 166 TVTVATASKDRTLRLFKF 183
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
+HS +SA +++ ++S+SYDG +WD + L ++ID N V + G+
Sbjct: 356 SHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPL-SVIDTHNDKVLSADWW-KGE 413
Query: 447 YILAATLDNTLKL 485
+++ D+ L++
Sbjct: 414 SVVSGGADSNLRI 426
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 365
K L H V +V + G+++ SSS+D +W+T
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 240
L+ + + + V L+ G+ +++++ H + V C S ++ +GS+D +V +WD+
Sbjct: 1018 LVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 443
L H D ++ ++ + D +++S S DG C G+ +++L VS + S +G
Sbjct: 1107 LCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAASHHG 1166
Query: 444 KYILAATLDNTLKLW 488
+ +L D +L L+
Sbjct: 1167 RIVLYGDDDLSLHLY 1181
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 362
H D VS V D +++ + SYD +WD
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWD 1074
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
K I + +S+ +L VSA DDK +K+W S +CL T+
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTV 101
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 267 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 446
P + + A+ ++ G L VS+ D L +IW S +CL T+ + VS V S +
Sbjct: 60 PIRKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR--VSAVAISSDDS 117
Query: 447 YILAA 461
++ A
Sbjct: 118 HVCYA 122
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGKCLKTL-KGHSNYVFCCNF--NPQ- 186
I+ + +S D R I+SA D ++V L +++ GHS ++ C F P+
Sbjct: 158 ITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPEL 217
Query: 187 -SNLIVSGSFDESVRIWDVRTG 249
++SGS D +VR+WD+ +G
Sbjct: 218 TQGYLMSGSGDSTVRLWDITSG 239
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 351 RIWDTASGQCLKTLIDDDNPPVS-----FVKFSPNGKYILAATLDNTLKLWDYSRGKC 509
RI+D C +L+D+ + P+ +++S +GK ++A D +K+W +C
Sbjct: 41 RIFDLIEN-CPVSLVDESDGPIRKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRC 97
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS--NYVFCCNFNP- 183
+ GH+ + DV++ L+ + S D L++W+ + + + HS N V +P
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 184 -QSNLIVSGSFDESVRIWDVRTG 249
+ I+S D +V+ WD+ G
Sbjct: 73 LGEDKIISQGRDGTVKCWDIEDG 95
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
VS DG + ++ +D R+++ G L ++ + V +SP+ + + +A+
Sbjct: 311 VSGTSIRVDGKIAATAGWDHRIRVYNYRKGNAL-AILKYHRATCNAVSYSPDCELMASAS 369
Query: 465 LDNTLKLW 488
D T+ LW
Sbjct: 370 EDATVALW 377
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
H+ + V++S D L+ SAS+D T+ +W+L
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKL 379
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 LKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKC 255
++V +++S K+L GH + V P + L+++ S DESVR+W+V TG C
Sbjct: 110 IRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGIC 163
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCN 174
K++ GH ++++ +L+++AS D+++++W + +G C+ GH V +
Sbjct: 122 KSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVD 181
Query: 175 FNPQS-NLIVSGSFDESVRIWDVR 243
F+P S D +++IW ++
Sbjct: 182 FHPSDIYRFASCGMDTTIKIWSMK 205
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL--IDDDNPPVSFVK 428
K L H D V+ + L++++S D R+W+ +G C+ V V
Sbjct: 122 KSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVD 181
Query: 429 FSPNGKYILAAT-LDNTLKLW 488
F P+ Y A+ +D T+K+W
Sbjct: 182 FHPSDIYRFASCGMDTTIKIW 202
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K H + AW D + + DK K+W L SG T+ H + P
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPG 126
Query: 187 SNLIVSGSFDESVR 228
NL+V+GS+D++++
Sbjct: 127 MNLLVTGSWDKTLK 140
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCL---KTLKGHSNYVFCCNFNPQSNLI 198
IS +++S + ++V+ S D ++ WE+ S G K H V C + +
Sbjct: 29 ISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTV 88
Query: 199 VSGSFDESVRIWDVRTG 249
+G D+ ++W + +G
Sbjct: 89 FTGGCDKQAKMWPLLSG 105
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +3
Query: 270 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
+H PV + DG+ + + D ++W SG T+ D P + + + P
Sbjct: 71 SHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHD-APFNQIAWIPGMNL 129
Query: 450 ILAATLDNTLK 482
++ + D TLK
Sbjct: 130 LVTGSWDKTLK 140
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 267 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCL----KTLIDDDNPPVSFVKF 431
P +D +S++ F+ ++V++S+D R W+ T S + K + D PV +
Sbjct: 23 PPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQ-PVLCSAW 81
Query: 432 SPNGKYILAATLDNTLKLWDYSRG 503
+G + D K+W G
Sbjct: 82 KDDGTTVFTGGCDKQAKMWPLLSG 105
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKC--------LKTLKGHSNYVFCCNFNPQSNLIV 201
A S + R + +A+ +KVWE+ K + LKGH + V F+P S I+
Sbjct: 246 AVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQII 305
Query: 202 SGSFDESVRIWDV 240
+ S D S+R+W++
Sbjct: 306 TASKDGSIRVWNI 318
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGL-CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
+A + DGS++++S +G +W +G+ L +D + SPNG+++ AA
Sbjct: 200 TATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGH-VDTNQLKNHMAAVSPNGRFLAAAA 258
Query: 465 LDNTLKLWD 491
+K+W+
Sbjct: 259 FTADVKVWE 267
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 117
+ GHK ++ + +S +S I++AS D +++VW ++
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTL 392
L L H D V+ + F+ DG + ++ DG+ R++ D AS + K L
Sbjct: 79 LNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFL 126
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLK 144
T+ GH ++ + +SSD + + +A D ++V++L +S K K L+
Sbjct: 81 TLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLR 127
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWD 491
V+++ FSPN + I+ A+ D ++++W+
Sbjct: 292 VTWLCFSPNSEQIITASKDGSIRVWN 317
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/73 (21%), Positives = 39/73 (53%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 213
I+ +A+S+D + + D L++++ + K + K + + CC+++ I++G
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 214 DESVRIWDVRTGK 252
D+ V++W + K
Sbjct: 366 DDLVQVWSMEDRK 378
Score = 36.7 bits (81), Expect = 0.020
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 575 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 676
GK+I++G ED+LV +W+++ +++V GH V
Sbjct: 357 GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 33.1 bits (72), Expect = 0.25
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 46 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 162
+WS D + I++ +D ++VW + K + +GH+++V
Sbjct: 352 SWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 285 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
++++ F+ DG+ + + DG RI+D + Q L + +S +GKYIL
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLT-QKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 465 LDNTLKLW 488
D+ +++W
Sbjct: 365 EDDLVQVW 372
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 503 KMLKTYTG-HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN----LQSKEIVQRLS 658
K+ + YTG HK YC+ + +G +VSG D L+ +W+ S+E+V +LS
Sbjct: 122 KLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLLVLWSADHGADSRELVPKLS 178
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 189
++ GH + + V+ + + S + D ++KVW L + +C++TL H++ V +
Sbjct: 262 SLLGHTLAV--VSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVM--SLICWD 317
Query: 190 NLIVSGSFDESVRIWDVRTG 249
++S S D +V+IW G
Sbjct: 318 QFLLSCSLDNTVKIWAATEG 337
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/61 (26%), Positives = 36/61 (59%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSR 500
+ S + D ++W + QC++TL + + +S + + +++L+ +LDNT+K+W +
Sbjct: 280 LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD---QFLLSCSLDNTVKIWAATE 336
Query: 501 G 503
G
Sbjct: 337 G 337
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 141
+ GH+ ++ +A S S + +AS D+T+++W+ +SG+C L
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 LKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 255
L W L T L GH V S+ + + S DE+VRIWD +G+C
Sbjct: 125 LHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQC 178
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
+L L H V+ + + ++S D RIWD ASGQC L
Sbjct: 136 LLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 572 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 679
G + SG+ DN + +W+L + + +Q L+ HT V+
Sbjct: 276 GANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVM 311
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +3
Query: 336 YDGLCRI---WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 506
Y CR W L T +D V+ + + A+ D T+++WD + G+
Sbjct: 118 YGDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQ 177
Query: 507 C 509
C
Sbjct: 178 C 178
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 16 SGHKMGISDVAWSSDSRLIVSASDDKTL-KVWELSSGKCLKT---LKGHSNYVFCCNFNP 183
SGHK + WS + + + D K++ +WE +SG GH+ V ++P
Sbjct: 220 SGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSP 279
Query: 184 -QSNLIVSGSFDESVRIWDVRTGK 252
+ N+ S S D SV +WD+R GK
Sbjct: 280 AEENVFASCSVDGSVAVWDIRLGK 303
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 273 HSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
HS PVS++ F ++ S ++SSSYDGL R+ D + + L+ + + + PN +
Sbjct: 262 HSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVE--KSVFDLVYSTDEAIFSLSQRPNDEQ 319
Query: 450 ILAATLD-NTLKLWDYSRGK 506
L D +WD GK
Sbjct: 320 SLYFGQDYGVFNVWDLRAGK 339
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 55 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRI 231
+D + + D VW+L +GK + + H + +FNPQ+ +++ + S D + +
Sbjct: 316 NDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACL 375
Query: 232 WDVRT 246
WD+R+
Sbjct: 376 WDLRS 380
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 195
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 196 IVSGSFDESVRI 231
GS ++V I
Sbjct: 114 FAVGSGAKTVCI 125
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 195
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 196 IVSGSFDESVRI 231
GS ++V I
Sbjct: 114 FAVGSGAKTVCI 125
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 195
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 196 IVSGSFDESVRI 231
GS ++V I
Sbjct: 114 FAVGSGAKTVCI 125
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ + WS R ++SA L +W+ S + L GH++ V +P + S
Sbjct: 331 VCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASA 390
Query: 208 SFDESVRIWDV 240
+ DE++R+W+V
Sbjct: 391 AGDETLRLWNV 401
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCC 171
T GH + + WS + + S +D + +W+ S + + L + H+ V
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRAL 290
Query: 172 NFNP-QSNLIVSGS--FDESVRIWDVRTGKC*N 261
+ P Q++L+ +G D + W+ TG C N
Sbjct: 291 AWCPFQASLLATGGGVGDGKINFWNTHTGACLN 323
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 354 IWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSRGKC*RHIRD 527
+WD +S K + IDD+N PV+ + ++ +G LA LDN+ +++WD RH+R
Sbjct: 134 LWDASSCYTSKLVTIDDENGPVTSINWTQDG-LDLAVGLDNSEVQVWDCVSN---RHVRT 189
Query: 528 TR 533
R
Sbjct: 190 LR 191
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 186
TI ++ + W+ D + D+ ++VW+ S + ++TL+ GH + V +N
Sbjct: 147 TIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWN-- 204
Query: 187 SNLIVSGSFDESVRIWDVR 243
++++ +G D + DVR
Sbjct: 205 NHILTTGGMDGKIVNNDVR 223
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 452 IGGDVRQHTQIMGL*QRKMLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
+ DVR + I+G TY GH E+ C +S +G K + SG DN+V+IW+
Sbjct: 218 VNNDVRIRSSIIG--------TYVGH-TEEVCGL-KWSESGKK-LASGGNDNVVHIWD 264
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
++GH + +A S D + SA+ D+TL++W + G+ KT K
Sbjct: 368 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV-FGEPPKTTK 410
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+ +GH+ G+ + W SDS +++ + D W+ ++ + + L +N+ F ++ P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +I + SFD + I+++
Sbjct: 317 KIPGVISASSFDGKIGIYNI 336
Score = 35.1 bits (77), Expect = 0.062
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +3
Query: 285 VSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILA 458
+S + +NR ++ S+SY+G IWD + + D S ++++PN I+
Sbjct: 175 ISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMV 234
Query: 459 ATLDN---TLKLWD 491
A+ D+ TLKLWD
Sbjct: 235 ASDDDSSPTLKLWD 248
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+ +GH+ G+ + W SDS +++ + D W+ ++ + + L +N+ F ++ P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +I + SFD + I+++
Sbjct: 317 KIPGVISASSFDGKIGIYNI 336
Score = 35.1 bits (77), Expect = 0.062
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +3
Query: 285 VSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILA 458
+S + +NR ++ S+SY+G IWD + + D S ++++PN I+
Sbjct: 175 ISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMV 234
Query: 459 ATLDN---TLKLWD 491
A+ D+ TLKLWD
Sbjct: 235 ASDDDSSPTLKLWD 248
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 37.1 bits (82), Expect = 0.015
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPV 416
+N E + P D S + + +++ + +WD +SG + + ID+D PV
Sbjct: 112 QNSERVLDAPGLRDDFSLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPV 171
Query: 417 SFVKFSPNGKYILAATLDNT-LKLWDYSRGKC*RHIRDTRTKNIVSL 554
+ + ++ +G LA LDN+ ++LWD + R +R + SL
Sbjct: 172 TSINWTQDG-LDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL 217
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ + WS R ++S+ L +W+ S + L GH++ V +P + S
Sbjct: 347 VCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASA 406
Query: 208 SFDESVRIWDV 240
+ DE++R+W+V
Sbjct: 407 AGDENLRLWNV 417
Score = 34.7 bits (76), Expect = 0.082
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE--LSSGK----CLKTLKGHSNYVFC 168
+T GH + + WS S +D + +W+ L+S K L + H+ V
Sbjct: 246 ETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRA 305
Query: 169 CNFNP-QSNLIVSGS--FDESVRIWDVRTGKC*N 261
+ P Q++L+ +G D ++ W+ TG C N
Sbjct: 306 LAWCPFQASLLATGGGVGDGKIKFWNTHTGACLN 339
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 186
TI K ++ + W+ D + D+ +++W+ S + ++TL+ GH + V ++
Sbjct: 163 TIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWD-- 220
Query: 187 SNLIVSGSFDESVRIWDVR 243
++++ +G D + DVR
Sbjct: 221 NHILTTGGMDGKIVNNDVR 239
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ + +AW + L D K + ++T GH+ V ++ N
Sbjct: 209 GHESRVGSLAWDNHI-LTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNKQ 267
Query: 199 VSGSFDESVRIWD 237
SG D V IWD
Sbjct: 268 ASGGNDNVVHIWD 280
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW------NLQSKEIVQRLSGHT 667
+++TY GH E+ C +S +G K SG DN+V+IW + Q+++ + R HT
Sbjct: 244 IVETYLGH-TEEVCGL-KWSESGNKQ-ASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHT 300
Query: 668 DTV 676
V
Sbjct: 301 AAV 303
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/100 (26%), Positives = 46/100 (46%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
EK++ H + + S +I S+SDD T+ +W+LSS ++ L S V N
Sbjct: 3317 EKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYIND 3376
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQFQLFIS 303
+ IV+ + + +W + G C + Q+ L +S
Sbjct: 3377 LTGEIVTAA-GSVLAVWSI-NGDCLSVVNTSQLPTDLIVS 3414
Score = 34.7 bits (76), Expect = 0.082
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 234 GCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 413
G + K L AH+ V + ++ +I SSS D IWD +S ++ L + + P
Sbjct: 3310 GSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQL-PNFSVP 3368
Query: 414 VSFVKFSP-NGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSLPT--LVSLAGSG 584
V+ V + G+ + AA + L +W + G C N LPT +VS+AGS
Sbjct: 3369 VTVVYINDLTGEIVTAA--GSVLAVWSIN-GDC------LSVVNTSQLPTDLIVSVAGST 3419
Query: 585 *YRDQKTTWCTYG 623
+TTW G
Sbjct: 3420 FSDWLETTWYVTG 3432
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 KPLPAHS---DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 428
KPL +++ D V+ V N S + S+ G +I D KTL S V+
Sbjct: 96 KPLESYNYNKDEVNQVVCNGRSSFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQ 155
Query: 429 FSPNGKY-ILAATLDNTLKLWDYSRGK 506
F P + ++ LD+ L LWD+S+G+
Sbjct: 156 FIPWRPWEVITGGLDSKLVLWDFSKGR 182
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 10 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 156
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 269 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 318
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
+ L H + +RD IV +S + C W + ++ +ID PVS + F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 438 NGKYILAATLDNTLKLWD 491
+ IL A+ N +K +D
Sbjct: 69 GNENILYASCGNEIKSFD 86
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 127 CLK-TLKGHSNYVFCCNFN---PQSNLIVSGSFDESVRIWD 237
CL ++ GH++ V C F+ + ++SG D++V+IWD
Sbjct: 265 CLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
GH + C+ + G++++SG D V IW+
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPV 416
+N E + P +D + S +++ + +WD +SG K + ID++ PV
Sbjct: 78 QNSERVLDAPGIADDFYLNLLDWGSSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPV 137
Query: 417 SFVKFSPNGKYILAATLDNT-LKLWDYSRGKC*RHIRDTRTKNIVSL 554
+ + ++ +G LA LDN+ ++LWD + R +R + SL
Sbjct: 138 TSINWTQDG-LDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL 183
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ + WS R ++S+ L +W+ S + L GH++ V +P + S
Sbjct: 314 VCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASA 373
Query: 208 SFDESVRIWDV 240
+ DE++R+W+V
Sbjct: 374 AGDETLRLWNV 384
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-------GKCLKTLKGHSNYVF 165
+T GH + + WS + + S +D + +W+ S + L + H+ V
Sbjct: 212 ETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVR 271
Query: 166 CCNFNP-QSNLIVSGS--FDESVRIWDVRTGKC*N 261
+ P Q++L+ +G D ++ W+ TG C N
Sbjct: 272 ALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLN 306
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 186
TI + ++ + W+ D + D+ +++W+ S + ++TL+ GH + V +N
Sbjct: 129 TIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWN-- 186
Query: 187 SNLIVSGSFDESVRIWDVR 243
++++ +G D + DVR
Sbjct: 187 NHILTTGGMDGKIVNNDVR 205
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 198
GH+ + +AW++ L D K + ++T GH+ V ++ +
Sbjct: 175 GHESRVGSLAWNNHI-LTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKKL 233
Query: 199 VSGSFDESVRIWDVRT 246
SG D V IWD R+
Sbjct: 234 ASGGNDNVVHIWDHRS 249
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 506 MLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 634
+++TY GH E+ C +S +G K + SG DN+V+IW+ +S
Sbjct: 210 IVETYLGH-TEEVCGL-KWSESGKK-LASGGNDNVVHIWDHRS 249
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 13 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 144
++GH + +A S D + SA+ D+TL++W + G+ KT K
Sbjct: 351 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV-FGEPPKTTK 393
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCC 171
T+ GH +S V + DS +VS+S D TLK+W+LS SG L + GH+N
Sbjct: 699 TMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV 757
Query: 172 NFNPQSNLIVSGSFDESVRIW 234
+ I +GS V ++
Sbjct: 758 GLSVSDGYIATGSETNEVFVY 778
Score = 32.7 bits (71), Expect = 0.33
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 219 ECSDMGCENREMLKPLP--AHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKT 389
EC+ + +NR++ P+ A +S++ +N S I SS++DG+ +IWD A Q L T
Sbjct: 562 ECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQ-LVT 620
Query: 390 LIDDDNPPVSFVKFSPNGKYILAATLDN 473
+ + V + S +LA+ D+
Sbjct: 621 EMKEHKKRVWSIDISSADPTLLASGSDD 648
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 285 VSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 461
V V F D G + S D +D + + + + VS+VKF + + ++
Sbjct: 663 VCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSS 722
Query: 462 TLDNTLKLWDYS 497
T DNTLKLWD S
Sbjct: 723 T-DNTLKLWDLS 733
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 186
K +G +S AW V+A+ + +++ W+L + K + +++ H+ +V ++NP+
Sbjct: 162 KDSAGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HA-HVRGVDYNPK 219
Query: 187 SNLIVSGSFDES-VRIWDVRTGK 252
I+ + DES + +WD+R K
Sbjct: 220 REHILVTAEDESGIHVWDLRKAK 242
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 207
+ + WS R ++S+ L +W+ S + L GH++ V +P + S
Sbjct: 345 VCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASA 404
Query: 208 SFDESVRIWDV 240
+ DE++R+W+V
Sbjct: 405 AGDENLRLWNV 415
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 354 IWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 494
+WD +SG + + ID+D PV+ + ++ +G LA LDN+ ++LWD+
Sbjct: 147 LWDASSGSTSELVTIDEDKGPVTSINWTQDG-LDLAVGLDNSEVQLWDF 194
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQ 186
TI K ++ + W+ D + D+ +++W+ S + ++TL GH + V +N
Sbjct: 160 TIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAWN-- 217
Query: 187 SNLIVSGSFDESVRIWDVR 243
++++ +G D + DVR
Sbjct: 218 NHILTTGGMDGKIVNNDVR 236
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Frame = +1
Query: 10 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE---LSSGK----CLKTLKGHSNYVFC 168
T GH + + WS + + S + + +W+ ++S K L + H+ V
Sbjct: 244 TYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRA 303
Query: 169 CNFNP-QSNLIVSGS--FDESVRIWDVRTGKC*N 261
+ P Q+ L+ +G D ++ W+ TG C N
Sbjct: 304 LAWCPFQATLLATGGGVGDGKIKFWNTHTGACLN 337
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1
Query: 100 KVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 243
++++L + + + H YV P+S+L+VS S D+++RIWD+R
Sbjct: 437 RLFDLRENGFISSWRAHDGYVTKL-VAPESHLLVSSSLDKTLRIWDLR 483
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 58 DSRLIVSASDDKTLKVWELSSGKCLK--TLKGHSNYV 162
+S L+VS+S DKTL++W+L + +KGH++ V
Sbjct: 464 ESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV 500
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +2
Query: 500 RKMLKTYTGHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIVQRLS-GHTD 670
R++++TY GH N + F SV G +VSGSE+N V++++ + +E V GHT+
Sbjct: 288 RRVVRTYRGHVNSRN--FVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGHTN 344
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 19 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFC-CNFNP-QS 189
G ++ D + S + S SDD T+++W+ +G L +T++ C F+P
Sbjct: 166 GRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGG 225
Query: 190 NLIVSGSFDESVRIWDVR 243
+ I G D + ++D+R
Sbjct: 226 SSIAVGCADRNAYVYDIR 243
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/86 (25%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPP 413
E+ +++K L +S + FN+DG+++ + + DG R+++ S +KTL+++ +
Sbjct: 131 ESEKVVKELKDVGQQLS-LSFNQDGTVLATGAEDGTLRVFEWPS---MKTLLNESKTHAS 186
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWD 491
V + FS +GK++++ ++WD
Sbjct: 187 VKSLTFSESGKFLVSLGAP-LCRVWD 211
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 425
+ +L H+ V ++ F+ G +VS LCR+WD + + +L + + +
Sbjct: 175 KTLLNESKTHAS-VKSLTFSESGKFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASC 232
Query: 426 KFS 434
+FS
Sbjct: 233 RFS 235
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/86 (25%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPP 413
E+ +++K L +S + FN+DG+++ + + DG R+++ S +KTL+++ +
Sbjct: 131 ESEKVVKELKDVGQQLS-LSFNQDGTVLATGAEDGTLRVFEWPS---MKTLLNESKTHAS 186
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWD 491
V + FS +GK++++ ++WD
Sbjct: 187 VKSLTFSESGKFLVSLGAP-LCRVWD 211
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +3
Query: 246 REMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 425
+ +L H+ V ++ F+ G +VS LCR+WD + + +L + + +
Sbjct: 175 KTLLNESKTHAS-VKSLTFSESGKFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASC 232
Query: 426 KFS 434
+FS
Sbjct: 233 RFS 235
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 273 HSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 449
H + ++ V F N L +SS+D ++WD V FSP+ +Y
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 450 ILAATLDNTLK 482
+LA+ +DN ++
Sbjct: 642 LLASAVDNEVR 652
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSG 207
++ V +S +L +++ K + ++++ G L+ H ++ F+ S L +
Sbjct: 543 LTSVHANSTDQLFLASGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATS 602
Query: 208 SFDESVRIWDVR 243
SFD+ V++WD+R
Sbjct: 603 SFDKDVKLWDLR 614
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 7 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
+T GH+ G+ + W SDS +++ D W +GK + L N+ F ++ P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 184 Q-SNLIVSGSFDESVRIWDV 240
+ +I + S D + I+++
Sbjct: 306 KMPGVISASSVDGKIGIYNL 325
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKC-----LKTLKGHSNYVFCCNFNPQS-NLIVSGSF 213
S LI D + +W S + ++ L H V FN +S N + SG+
Sbjct: 77 SGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGAD 136
Query: 214 DESVRIWDVRTGKC*NHY 267
D +V IWD+ +HY
Sbjct: 137 DGTVCIWDLANPSKPSHY 154
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 67 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 246
L+ DD ++ + LSS K + L+GH + C F+ N++VS D + +W ++
Sbjct: 483 LLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 375 QCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 497
QC ++ D ++ + +SP+G YILA D T KLW +S
Sbjct: 360 QCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWS 402
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 371
+R++ + L H ++ + F+R +++VSS DG +W T S
Sbjct: 500 SRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
++ + GH I+ +A+S ++VS+ D L +W S+ +K +S FC N
Sbjct: 504 KEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW--STKSWVKLTSKNSTRKFCNRSNL 561
Query: 184 QSNLIVS 204
+S +V+
Sbjct: 562 ESTSLVT 568
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 10 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 156
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 243 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 292
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 258 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 437
+ L H + +RD IV +S + C W + ++ +ID PVS + F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 438 NGKYILAATLDNTLKLWD 491
+ IL A+ N +K +D
Sbjct: 69 GNENILYASCGNEIKSFD 86
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 127 CLK-TLKGHSNYVFCCNFN---PQSNLIVSGSFDESVRIWD 237
CL ++ GH++ V C F+ + ++SG D++V+IWD
Sbjct: 239 CLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 524 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 625
GH + C+ + G++++SG D V IW+
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +1
Query: 10 TISGHKMGISD----VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
+I GHK G D V W S + ++ + T+ +W+L + ++++ S
Sbjct: 1118 SIQGHKPGARDLNAVVDWQQQSGYLYASGETSTVTLWDLEKEQLVRSVPSESECGVTALS 1177
Query: 178 NPQ--SNLIVSGSFDESVRIWDVRT 246
Q + +G D S+R++DVR+
Sbjct: 1178 ASQVHGGQLAAGFADGSLRLYDVRS 1202
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 174
+K +GH I DV + + +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVA 63
Query: 175 F-NPQ-SNLIVSGSFDESVRIW 234
+ +P+ +L+ S S+D + +W
Sbjct: 64 WAHPKFGSLLASCSYDGQIILW 85
Score = 32.7 bits (71), Expect = 0.33
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 22/100 (22%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSR--------------LIVSASDDKTLKVWELSSGK----CL 132
K H +G++ V+W+ + + S D T+KVW+ S+G C
Sbjct: 144 KIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSWKMDCF 203
Query: 133 KTLKGHSNYV----FCCNFNPQSNLIVSGSFDESVRIWDV 240
L H+++V + N + I SGS D V IW +
Sbjct: 204 PALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTI 243
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGH-----SNYVFCC--NFNPQS 189
+A SSD + +A +D +L++W +S G C T+ G S+ +CC + S
Sbjct: 19 LANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCCSPSIGLPS 78
Query: 190 NLIVSGSFDESVRIWDV 240
+ S S D S+ WD+
Sbjct: 79 GRLFSSSIDGSISEWDL 95
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 64 RLIVSASDDKTLKVWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 234
R++ +A DD ++++ +S+ + L ++L S ++P + I SGS D +R W
Sbjct: 166 RILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCW 225
Query: 235 DVRTGKC*NHYR 270
D + C YR
Sbjct: 226 DATS--CHEVYR 235
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 198 CIRQFR*ECSDMGCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 371
C+R +R S++ E + LP S +V ++ D I S S DGL R WD S
Sbjct: 176 CVRLYR--ISNL--EKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATS 229
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELSS----GKCLKTLKGHSNYVFCCNFNPQS---NLIV 201
V WS D++ I S S D ++ W+ +S + L G + C ++ S +++V
Sbjct: 204 VTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLV 263
Query: 202 SGSFDESVRIWDVRTG 249
SG +V+ WD G
Sbjct: 264 SGDSTGTVQFWDSEHG 279
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 419
+ +E++ L + V ++ F+ DG ++SS DG +WD + +CL +D+ + +
Sbjct: 363 KTKELIGTLKMNGS-VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 421
Query: 420 FVKFSPNGKYILAAT 464
+ S NG + T
Sbjct: 422 SLCSSLNGALFASGT 436
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 52 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 231
S DS I ++ + + + + + TLK + + V F+ ++S D V +
Sbjct: 342 SQDSNTIAFVGNEGYILLVSTKTKELIGTLKMNGS-VRSLAFSEDGKHLLSSGGDGQVYV 400
Query: 232 WDVRTGKC 255
WD+RT KC
Sbjct: 401 WDLRTMKC 408
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +3
Query: 303 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 482
++D + I +G + T + + + TL N V + FS +GK++L++ D +
Sbjct: 342 SQDSNTIAFVGNEGYILLVSTKTKELIGTL--KMNGSVRSLAFSEDGKHLLSSGGDGQVY 399
Query: 483 LWDYSRGKC 509
+WD KC
Sbjct: 400 VWDLRTMKC 408
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 132
+ +A+S D + ++S+ D + VW+L + KCL
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCL 409
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
HS V+ ++F+ DG+ + S +G+ +W +G+ K + P+ + +SP+
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK--KKFLPRIGSPLLYFMWSPDPTLS 339
Query: 453 LAATLDNTLKL 485
DN + L
Sbjct: 340 SVVCADNQIHL 350
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +3
Query: 273 HSDP-VSAVHFNRDGSLIVSSSYDGLCRIW---------DTASGQCLKTLIDDDNPPVSF 422
H D VSA+ F+ S+ VS+S+ G +IW D S + P++
Sbjct: 483 HRDAGVSAIVFHPTRSMAVSTSFGGDFKIWVCNSDKNQTDKDSSWICHAVGSYKKKPMTA 542
Query: 423 VKFSPNGKYILAATLDNTLKLWD 491
FS +G ++A +N + LW+
Sbjct: 543 AAFSGDGT-VMAVAAENVITLWN 564
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +1
Query: 10 TISGHKMGISD----VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 177
+I G K G S V W S + + + ++ VW+L + +K++ S
Sbjct: 1118 SIQGQKPGASGLNAVVDWQQQSGYLYVSGESLSIMVWDLDKEQLVKSMPFESGCSVTALS 1177
Query: 178 NPQ--SNLIVSGSFDESVRIWDVRT 246
Q + + +G D SVR++DVRT
Sbjct: 1178 ASQVHGSQLAAGFADGSVRLYDVRT 1202
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 282 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 416
PV++V FN+ GSL+++ DG +WD K + + P V
Sbjct: 480 PVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPVV 524
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 422
N ++ P + + F+ D + ++S DG RIW G L TL + +
Sbjct: 153 NLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDENIEL 212
Query: 423 VKFSPNG 443
+FS +G
Sbjct: 213 CRFSKDG 219
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVS 204
I DVA S L+V+ DK + ++++ SGK +++ K H + V +P N +V
Sbjct: 529 IYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVI-LDPSCNYLVC 587
Query: 205 GSFDESVRIWDVRTGK 252
+ ++ D TG+
Sbjct: 588 SYSNRTICFVDFVTGE 603
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSS------GKCLKTLKGHSNYVF 165
K H + V W+ D LI++ S D T+++++ G + +GH V
Sbjct: 331 KVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVL 390
Query: 166 CCNFNP-QSNLIVSGSFDESVRIWD 237
C ++P +S++ S + D + IWD
Sbjct: 391 CVQWSPDKSSVFGSSAEDGLLNIWD 415
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 273 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 452
HS V+ ++F+ DG+L+ S G +W+ +G+ K L+ P+ + FS +
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK--KQLLPKIGSPLLYFIFSSDSTLS 302
Query: 453 LAATLDNTLKL 485
DN + L
Sbjct: 303 SVICADNQIHL 313
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAAT---LDNTLK 482
+VSSS DG +IW Q L L D PVS FV +I+ T L+ +K
Sbjct: 337 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 396
Query: 483 LW 488
+W
Sbjct: 397 IW 398
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAAT---LDNTLK 482
+VSSS DG +IW Q L L D PVS FV +I+ T L+ +K
Sbjct: 372 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 431
Query: 483 LW 488
+W
Sbjct: 432 IW 433
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 174
+K +GH+ + DV + I +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVA 63
Query: 175 F-NPQ-SNLIVSGSFDESVRIW 234
+ +P+ +++ S S+D V +W
Sbjct: 64 WAHPKYGSILASCSYDGQVILW 85
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN-P 183
K +G + +S AW+ V+A+ + +++ W+L + K K +V ++N
Sbjct: 162 KESAGMRHSLSGGAWNPHDVNSVAATSESSIQFWDLRTMK--KNNSIERAHVRNVDYNLK 219
Query: 184 QSNLIVSGSFDESVRIWDVRTGK 252
+ +++VS + + +WD+R K
Sbjct: 220 REHILVSADDESGIHLWDLRKTK 242
Score = 32.3 bits (70), Expect = 0.44
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +1
Query: 10 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGK-----CLKTLKGHSNYVFC 168
++ H I+ V W S +S ++S D++ L W L S K K G + +
Sbjct: 115 SLDAHVGKINCVLWCPSGNSDKLISM-DEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSG 173
Query: 169 CNFNPQSNLIVSGSFDESVRIWDVRTGKC*NHYRRIQIQ 285
+NP V+ + + S++ WD+RT K N R ++
Sbjct: 174 GAWNPHDVNSVAATSESSIQFWDLRTMKKNNSIERAHVR 212
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +1
Query: 4 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 183
EK + H ++ + S +I S SDD T+ +W+LSS ++ L + N
Sbjct: 3373 EKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYIND 3432
Query: 184 QSNLIVSGSFDESVRIWDVRTGKC 255
+ IV+ + + +W + G C
Sbjct: 3433 LTGEIVTAA-GTVLAVWSI-NGDC 3454
Score = 29.9 bits (64), Expect = 2.3
Identities = 32/130 (24%), Positives = 55/130 (42%)
Frame = +3
Query: 234 GCENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 413
G + K L AH+ V+ + ++ +I S S D IWD +S ++ L D P
Sbjct: 3366 GSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPI 3425
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSLPTLVSLAGSG*YR 593
+ G+ + AA L +W + G C + T + S +++S+ GS
Sbjct: 3426 SAIYINDLTGEIVTAA--GTVLAVWSIN-GDC---LAVANTSQLPS-DSVLSVTGSTSSD 3478
Query: 594 DQKTTWCTYG 623
+T+W G
Sbjct: 3479 WLETSWYVTG 3488
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 240 ENREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 344
E+R ++ AH+ P+SA+ F+ G+L+V++S G
Sbjct: 369 ESRAIIAQFRAHTSPISALCFDPSGTLLVTASIHG 403
>At5g54730.1 68418.m06815 expressed protein
Length = 763
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 243 NREMLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 344
N+ ++ AH P+SA+ F++ G L+V++S G
Sbjct: 336 NKSVITQFKAHKSPISALCFDQSGLLLVTASIQG 369
>At5g05150.1 68418.m00547 transport protein-related contains 2 WD-40
repeats (PF00400); similar to transport protein Gsa12p
(GI:18307769) [Pichia pastoris]
Length = 374
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIWDTASGQCLKTLIDD-DNPPVSFV 425
++K + AH ++ + DGSL+ ++S G L RI++ G L+ + + V
Sbjct: 196 VIKFIKAHDSAIACMTLTLDGSLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYNV 255
Query: 426 KFSPNGKYILAATLDNTLKLW 488
S N K++ A++ TL ++
Sbjct: 256 AISSNLKWVAASSEKGTLHVF 276
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 94 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 243
T+ +W+ +S L ++ H V F+P +L+ + + ++IWD+R
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 255 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 392
L + H PVS+V F+ +G L+ +S + +IWD + ++T+
Sbjct: 274 LVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 411 PVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC*RHIRDTRTKNIVSLPTLVSLAGSG 584
PVS V F PNG + + + +K+WD + + + I K + + AG+G
Sbjct: 283 PVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKTLSFSQKGLLAAGTG 340
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 40 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 219
D + ++S S SD ++ ++L++G + T+ H + ++ + ++S FDE
Sbjct: 59 DCCFENESTSFTSGSDG-FIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDE 116
Query: 220 SVRIWDVR 243
++ WD R
Sbjct: 117 KIKFWDTR 124
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 40 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 219
D + ++S S SD ++ ++L++G + T+ H + ++ + ++S FDE
Sbjct: 59 DCCFENESTSFTSGSDG-FIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDE 116
Query: 220 SVRIWDVR 243
++ WD R
Sbjct: 117 KIKFWDTR 124
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 1 FEKTIS--GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 114
FE+ +S H ++ +AWS D R + S S D ++ W L
Sbjct: 426 FEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSWIL 465
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 181 PQSNLIVSGSFDESVRIWDVRTGKC*NHYRRI 276
P+++L ++GS D V++WD + K +H+ ++
Sbjct: 2385 PRTSLFLTGSKDGEVKLWDAKAAKLIHHWPKL 2416
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 7 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 126
+ I H+ ++ VA S D S S D T+ W++SSGK
Sbjct: 139 RVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGK 178
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 34 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGS 210
I+ +A D I + L +++ +GK L + G S + +PQ +I S
Sbjct: 262 ITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFLGKCSGSIRSVVRHPQHQVIASCG 321
Query: 211 FDESVRIWDVRT 246
D +R++DV+T
Sbjct: 322 LDRYLRVYDVKT 333
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 187 SNLIVSGSFDESVRIWDVRTG 249
S++++SGS D ++RIWD+ +G
Sbjct: 549 SHVLISGSMDCTIRIWDLESG 569
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +3
Query: 321 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAAT---LDNTLK 482
+VSSS DG +IW Q L L D PV+ FV +I+ T L+ +K
Sbjct: 356 LVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIK 415
Query: 483 LW 488
+W
Sbjct: 416 IW 417
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +1
Query: 43 VAWSSDSRLIVSASDDKTLKVWELS----SGKCLKTLKGHSNYVFCCNFNPQS---NLIV 201
V WS+D++ I S S D ++ W+ + + L G N C ++ S ++V
Sbjct: 204 VTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLV 263
Query: 202 SGSFDESVRIWDVRTG 249
SG SV+ WD + G
Sbjct: 264 SGDSTGSVQFWDSQHG 279
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWD 491
+S +KFS +G+YIL+ TLKLWD
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWD 356
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 414 VSFVKFSPNGKYILAATLDNTLKLWD 491
+S +KFS +G+YIL+ TLKLWD
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWD 357
>At4g33400.1 68417.m04747 dem protein-related / defective embryo and
meristems protein-related identical to dem GI:2190419
from [Lycopersicon esculentum]
Length = 645
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 309 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 464
DGS++V S DG R++ + + + KT PV+ V + +GK+I+ T
Sbjct: 443 DGSIVVGS-LDGKIRLYSSNTMRQAKTAFPGLGAPVTHVDATFDGKWIVGTT 493
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 25 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIV 201
K IS S+D +L+ + + + + E + + ++ +K H V F+P S +V
Sbjct: 285 KNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLV 344
Query: 202 SGSFDESVRI 231
S SFD R+
Sbjct: 345 SVSFDSRARL 354
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 252 MLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 431
+L AHS V + F+ G +VS +CR+WD + + +L + + + +F
Sbjct: 188 LLNESQAHSS-VKCLTFSESGQFLVSLG-GPVCRVWDVNASAAVASLSKEKDEMFASCRF 245
Query: 432 S 434
S
Sbjct: 246 S 246
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +1
Query: 31 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 210
GIS++ +S++S ++ +S DK++++++ ++G ++ H V C F+ S+ S
Sbjct: 18 GISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDSSGF-SVC 75
Query: 211 FDESVRIWDVRTGK 252
D VR D GK
Sbjct: 76 ADTKVRRIDFNAGK 89
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 264 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLIDDDNPPVSFVKFSP 437
L H PV V ++ +++ S+D + WD ASG +T I P S
Sbjct: 93 LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASG-TERTQIGTYMQPERVNSLSL 151
Query: 438 NGKYILAATLDNTLKLWD 491
G ++ AT + ++D
Sbjct: 152 VGNRLVVATAGRHVNIYD 169
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 139 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 237
++ HS V C F+P ++N+++SG + +WD
Sbjct: 167 IRYHSRRVTCLEFHPTKNNILLSGDKKGQIGVWD 200
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 31 GISDVAWSSDSRLIVSASD-DKTLKVWELSSGKCL 132
GIS WS DSR I++ S+ L VW L + C+
Sbjct: 92 GISYARWSPDSRHILTTSEFQLRLTVWSLLNTACV 126
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 22 HKMGISDVAWSSDSRL-IVSASDDKTLKVWELSS 120
H+ ++ +AW+ S I SA DD +W++SS
Sbjct: 266 HQASVNAIAWAPHSSSHICSAGDDSQALIWDISS 299
>At1g49610.1 68414.m05562 F-box family protein contains F-box domain
Pfam:PF00646
Length = 354
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 421 NETGGLSSSIRVLRHCPEAVSQIRHKPS-*LEETIRL 314
N GG S+S+RVL+HC E V I P L+E + L
Sbjct: 7 NRDGG-SASVRVLKHCLEDVDSISSLPDVILQENLSL 42
>At1g24320.1 68414.m03068 alpha-glucosidase, putative similar to
alpha-glucosidase I from GI:16506680 [Arabidopsis
thaliana]
Length = 789
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 839 GXFPALDMKPRTEPLSDEIPKVILKYTLP*LDCLVVFKGSRSDNVFGGVAGP 684
G P+ D+KP + S P+VI + P L L +F+G ++++ G P
Sbjct: 3 GLSPSGDIKPLLDDESQR-PRVITPFPSPKLTDLSMFQGEHKESLYWGTYRP 53
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 288 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 404
S D S++V+ DG+ R+ D SG+ L +I DD
Sbjct: 350 SIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIMDD 388
>At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate
translocator, putative similar to
glucose-6-phosphate/phosphate-translocator precursor
[Solanum tuberosum] gi|2997593|gb|AAC08526
Length = 417
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 805 QNLCLMKFPK*FLSTLFHSWIVLSFSRAAEAIMFSVGWQARAENCIRVSRQPLYNLL 635
QN+ F K L+ + W++ SF A +I V W + C ++S+ + LL
Sbjct: 122 QNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYPCPKISKPFIIALL 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,511,015
Number of Sequences: 28952
Number of extensions: 458649
Number of successful extensions: 3565
Number of sequences better than 10.0: 255
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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