Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0478
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro...    43   5e-04
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ...    43   5e-04
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P...    43   5e-04
AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB...    29   7.2  
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.      29   9.5  

>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
           protein.
          Length = 1412

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +2

Query: 515 IARLKEKGTNVNRLQKQLLCAYINEKNIEKVKSYLSELRLSNFELNTAILAQLFEFLCEN 694
           I  ++ KG N N +++QLL A    +N+EK    + +L    F++   I AQL +    +
Sbjct: 664 IVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHH 723

Query: 695 DEIELAKEIRTEIDPK 742
            +   A EI  ++  K
Sbjct: 724 KKSSEALEIYGKLKAK 739



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 303 EGILEAAYAKGLSIDIETAEAIQQYLGENMTTKVXXXXXXXXXXXXXPVPI 455
           E IL+    +GLSI  + A  + + LG  +T K+             PVP+
Sbjct: 594 EKILKGLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644


>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
           stability factor protein.
          Length = 1412

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +2

Query: 515 IARLKEKGTNVNRLQKQLLCAYINEKNIEKVKSYLSELRLSNFELNTAILAQLFEFLCEN 694
           I  ++ KG N N +++QLL A    +N+EK    + +L    F++   I AQL +    +
Sbjct: 664 IVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHH 723

Query: 695 DEIELAKEIRTEIDPK 742
            +   A EI  ++  K
Sbjct: 724 KKSSEALEIYGKLKAK 739



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 303 EGILEAAYAKGLSIDIETAEAIQQYLGENMTTKVXXXXXXXXXXXXXPVPI 455
           E IL+    +GLSI  + A  + + LG  +T K+             PVP+
Sbjct: 594 EKILKGLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644


>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
           protein.
          Length = 1412

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +2

Query: 515 IARLKEKGTNVNRLQKQLLCAYINEKNIEKVKSYLSELRLSNFELNTAILAQLFEFLCEN 694
           I  ++ KG N N +++QLL A    +N+EK    + +L    F++   I AQL +    +
Sbjct: 664 IVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHH 723

Query: 695 DEIELAKEIRTEIDPK 742
            +   A EI  ++  K
Sbjct: 724 KKSSEALEIYGKLKAK 739



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 303 EGILEAAYAKGLSIDIETAEAIQQYLGENMTTKVXXXXXXXXXXXXXPVPI 455
           E IL+    +GLSI  + A  + + LG  +T K+             PVP+
Sbjct: 594 EKILKGLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644


>AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB,
            isoform B protein.
          Length = 1208

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 255  GRIIKSAVKSLPKNESEGILEAAYAKGLSIDIETAEAIQQ 374
            G+I K   K+ PKNE E + E   A+    + ET +++++
Sbjct: 1120 GKISKPKTKTKPKNEDEPVFELGAAERSLFEDETNDSLEK 1159


>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
          Length = 1715

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 178 KPPLQSEQDSTTDEAQNDSKNEIRD 252
           KP LQSE+D + +E + D+++E  D
Sbjct: 575 KPNLQSEEDKSEEEKREDTESECSD 599


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,830,785
Number of Sequences: 53049
Number of extensions: 553620
Number of successful extensions: 1148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)