Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0478
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   7.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 666  HSCLNFYVKMMRLNLPKKLEQK 731
            HS L + VK   L  P+K +QK
Sbjct: 1073 HSTLEYKVKERHLMRPRKRDQK 1094


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = +3

Query: 258 RIIKSAVKSLPKNESEGILEAAYAKGLSIDIETAEAIQQYLGENMTT 398
           + + S   +L KN  +G+    +AK +  D +    + +   +++TT
Sbjct: 673 KTLPSLPSTLTKNSKQGLFSKLFAKKVKKDKDIILNVPKESTQSLTT 719


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 185 LFSPNKTQLLTKLKTIVKMKYVIWSHY 265
           LFS   + LL  +  +    Y IWSH+
Sbjct: 92  LFSLAVSDLLLLISGLPPEIYYIWSHF 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,241
Number of Sequences: 438
Number of extensions: 3720
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)