Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0477
         (834 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   157   1e-38
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    42   7e-04
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U50312-5|AAA92322.1|  369|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U70857-5|AAB09171.1|   98|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   7.2  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical p...    28   9.5  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  157 bits (380), Expect = 1e-38
 Identities = 76/158 (48%), Positives = 99/158 (62%)
 Frame = +2

Query: 254 HTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 433
           HTGQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD
Sbjct: 83  HTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPD 142

Query: 434 AKRTRVKLPSGAKKVLPSSNRGMVGLLLEVDVLTNLFXKLEGHTTSTRSNVTAGHMYXXX 613
            K+TR++LPSGAKKV+ S NR M+GL+           K        ++   +       
Sbjct: 143 TKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGV 202

Query: 614 XXXXXXXXXXXXXIQHIGKASTVKRGTSAGRKVGLIAA 727
                         QHIG  STV+R  SAG+KVGLIAA
Sbjct: 203 AMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAA 240



 Score =  137 bits (331), Expect = 1e-32
 Identities = 62/83 (74%), Positives = 68/83 (81%)
 Frame = +1

Query: 10  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 189
           MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60

Query: 190 VHFRDPYKFKTRKELFIAPEGSH 258
           + FRDPYK+KT K   +A EG H
Sbjct: 61  IAFRDPYKYKTVKTTVVAAEGMH 83



 Score =   99 bits (238), Expect = 2e-21
 Identities = 41/48 (85%), Positives = 43/48 (89%)
 Frame = +1

Query: 511 VAGGGRIDKPIXKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNH 654
           VAGGGR DKP+ KAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNH
Sbjct: 169 VAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNH 216


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +2

Query: 302 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 478
           GN  P+G++  GT++ ++E     D     +A+G  AT++ H  D   T VKLP   +  
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217

Query: 479 LPSSNRGMVGLLLEVDVLTNLFXKLEGH 562
           L  +    VG L   D+   +F   + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 416 IGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGLLLE 520
           IGH  D +RTR  LP+G KKVL  + + +  LL++
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90


>U50312-5|AAA92322.1|  369|Caenorhabditis elegans Hypothetical
           protein B0222.5 protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 15/92 (16%)
 Frame = +1

Query: 550 AGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHPTYR*GFHC------QERNICWSQS 711
           AG   ++ K     W  V      P EH   GGN  +YR    C      Q+   C  QS
Sbjct: 194 AGHTCNQNKTSIRYWFDVETFQCFPFEHKGCGGNQNSYRTSSECYFDCVLQDYFSCAMQS 253

Query: 712 ---------WSYCCSAGPEGFVGXXTIQRRGP 780
                    W Y C  GP+G  G  T    GP
Sbjct: 254 QPARKSNGQW-YSCPEGPDGPPGFKTTTTPGP 284


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 10  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 120
           +GR  R+ +KG    F +HT   K    L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500


>U70857-5|AAB09171.1|   98|Caenorhabditis elegans Hypothetical
           protein C10G8.4 protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 753 SHESFRSCGAAIRPTLRPADVPLLTVEA-LPIC 658
           S+E FRSCG A  PT +  +  + T++  L +C
Sbjct: 42  SNEEFRSCGTACEPTCQNPNPQVCTLQCILNVC 74


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 121 HGYIKGVVKDIIHDPGRGAPLAVVHFR 201
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 121 HGYIKGVVKDIIHDPGRGAPLAVVHFR 201
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical
           protein Y57G11C.44 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +1

Query: 58  VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 183
           +S  ++RK +     LD+++  G  K ++KDI +D  +  P+
Sbjct: 1   MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,111,636
Number of Sequences: 27780
Number of extensions: 469054
Number of successful extensions: 1140
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)