Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0476
         (773 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NGT6 Cluster: ENSANGP00000029871; n=1; Anopheles gamb...    34   4.5  
UniRef50_Q05FV4 Cluster: Putative tRNA(5-methylaminomethyl-2-thi...    33   7.9  
UniRef50_O15802 Cluster: CG7; n=2; Plasmodium falciparum|Rep: CG...    33   7.9  

>UniRef50_A0NGT6 Cluster: ENSANGP00000029871; n=1; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000029871 - Anopheles gambiae
            str. PEST
          Length = 1920

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 130  YGVRYKKKRCVHFSRARSVICVYSDIFPSRSLAGLLN 240
            YG  Y+ +R +HF R   + CVY D+FP  +   L N
Sbjct: 1569 YGTFYQGQRAIHFLRNEDLACVY-DVFPPYASVDLSN 1604


>UniRef50_Q05FV4 Cluster: Putative
           tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase; n=1; Candidatus Carsonella ruddii
           PV|Rep: Putative
           tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase - Carsonella ruddii (strain PV)
          Length = 298

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = -3

Query: 549 N*TLKIKPQETSVRKRL*TNKNKIMIYKINYNSEAICLLHFKINHSVNDSN*QNRKKHLH 370
           N  +KIK  +  + K    +K KI+I K+N+N   IC +     +   ++     KK  +
Sbjct: 205 NFIVKIKYNQIIISKYNYLSKTKILILKLNFNYSKICKIKINSQNIFKNAKIIFNKKKCY 264

Query: 369 F*CYSEILKLIYY 331
             CY    K IY+
Sbjct: 265 LICY----KFIYF 273


>UniRef50_O15802 Cluster: CG7; n=2; Plasmodium falciparum|Rep: CG7 -
           Plasmodium falciparum
          Length = 1281

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 148 KKRCVHFSRARSVICVYSDIFPSRSLAGLLNVDVYI 255
           KK+  H+ +    +C+Y ++F  + L   LNV++Y+
Sbjct: 725 KKKAPHYYKFNYKVCLYLNVFKEKYLTSELNVEIYV 760


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,142,811
Number of Sequences: 1657284
Number of extensions: 12552124
Number of successful extensions: 22693
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22690
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)