Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0476
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283...    31   0.77 
08_02_0775 + 21070898-21071290,21071406-21071504,21075103-210751...    31   1.3  

>01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,
            2833799-2833868,2834021-2834108,2834325-2834580,
            2834758-2834883,2835217-2835425
          Length = 1410

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +1

Query: 157  CVHFSRARSVICVYSDIFPSRSLAGLLNVDVYIITFLFRLNLKS 288
            C H  R  SV+ +  D+ PS  LAG L+  +  +TFL RLNL S
Sbjct: 1065 CSHRRRPTSVVAL--DL-PSSDLAGTLSPAIGNLTFLRRLNLSS 1105


>08_02_0775 +
           21070898-21071290,21071406-21071504,21075103-21075126,
           21076344-21076391,21076536-21076788,21076945-21077055,
           21077544-21077680,21077778-21077891,21077982-21078181,
           21078268-21078516,21078730-21078886
          Length = 594

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -2

Query: 214 MEIYPNTHILHF*RVRSAHIFFFYNE--PHTINTIFLCLIIPIDVY-KKIASPLF 59
           +EI  N  +  + ++   + FFF  +   HT+  I+ C +IP+ V+  +I  PL+
Sbjct: 387 VEILENKKVSFWNKIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSVWLPEIEIPLW 441


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,616,674
Number of Sequences: 37544
Number of extensions: 317883
Number of successful extensions: 510
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)