Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0476
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48230-1|CAA88262.2|  587|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81533-5|CAB04337.1|  342|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AC006608-5|ABC71834.1|  311|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z48230-1|CAA88262.2|  587|Caenorhabditis elegans Hypothetical
           protein F42G10.1 protein.
          Length = 587

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 168 EVHTSFFFITNPILSTQSFFV*LYLLMCIKKLHLHY 61
           E+H S F + NPI   +S +     ++C +  H+HY
Sbjct: 289 EIHISVFTMFNPIADPKSVYDQFLYVLCHELQHVHY 324


>Z81533-5|CAB04337.1|  342|Caenorhabditis elegans Hypothetical
           protein F36G9.8 protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 226 RENEMEIYPNTHILHF*RVRSAHIFFFYNEPHTINTIFLCLII 98
           R   +E+YP+   L    V S H+F       TI+ IFLCL +
Sbjct: 168 RAQFIELYPDLQYL----VASKHVFIVCVVVETIHVIFLCLCV 206


>AC006608-5|ABC71834.1|  311|Caenorhabditis elegans Hypothetical
           protein C15F1.5b protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 556 LTCDSPLCLSLYGSMLIDPERNG 624
           L CD  +C+   GSML + E+NG
Sbjct: 128 LECDHDVCIKCIGSMLDECEKNG 150


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 556 LTCDSPLCLSLYGSMLIDPERNG 624
           L CD  +C+   GSML + E+NG
Sbjct: 198 LECDHDVCIKCIGSMLDECEKNG 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,277,228
Number of Sequences: 27780
Number of extensions: 321267
Number of successful extensions: 618
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)