BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0476 (773 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z48230-1|CAA88262.2| 587|Caenorhabditis elegans Hypothetical pr... 30 2.1 Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical pr... 29 4.9 AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 28 6.4 AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 28 6.4 >Z48230-1|CAA88262.2| 587|Caenorhabditis elegans Hypothetical protein F42G10.1 protein. Length = 587 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -3 Query: 168 EVHTSFFFITNPILSTQSFFV*LYLLMCIKKLHLHY 61 E+H S F + NPI +S + ++C + H+HY Sbjct: 289 EIHISVFTMFNPIADPKSVYDQFLYVLCHELQHVHY 324 >Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical protein F36G9.8 protein. Length = 342 Score = 28.7 bits (61), Expect = 4.9 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2 Query: 226 RENEMEIYPNTHILHF*RVRSAHIFFFYNEPHTINTIFLCLII 98 R +E+YP+ L V S H+F TI+ IFLCL + Sbjct: 168 RAQFIELYPDLQYL----VASKHVFIVCVVVETIHVIFLCLCV 206 >AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical protein C15F1.5b protein. Length = 311 Score = 28.3 bits (60), Expect = 6.4 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 Query: 556 LTCDSPLCLSLYGSMLIDPERNG 624 L CD +C+ GSML + E+NG Sbjct: 128 LECDHDVCIKCIGSMLDECEKNG 150 >AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical protein C15F1.5a protein. Length = 381 Score = 28.3 bits (60), Expect = 6.4 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 Query: 556 LTCDSPLCLSLYGSMLIDPERNG 624 L CD +C+ GSML + E+NG Sbjct: 198 LECDHDVCIKCIGSMLDECEKNG 220 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,277,228 Number of Sequences: 27780 Number of extensions: 321267 Number of successful extensions: 618 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 609 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 618 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1861650246 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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