BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0473 (646 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_1223 + 35033273-35033353,35033455-35033539,35033613-350336... 70 1e-12 03_05_0714 - 27076881-27077218,27077332-27077482,27077768-270779... 30 1.8 11_06_0754 - 26935647-26937780,26940890-26941827 29 3.2 >02_05_1223 + 35033273-35033353,35033455-35033539,35033613-35033683, 35034400-35034531,35034654-35034769,35035128-35035251, 35035349-35035417,35035508-35035628,35035707-35035843 Length = 311 Score = 70.1 bits (164), Expect = 1e-12 Identities = 32/77 (41%), Positives = 55/77 (71%) Frame = +2 Query: 293 IGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYE 472 +G+Q+++P+RG + LK+ GDLGQ++ Y+ D +SI + SNVVINL+GR+YE Sbjct: 1 MGSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPRDVDSIKAVMAKSNVVINLIGREYE 60 Query: 473 TKNFKYNDVHVDV*EEL 523 T+N+ +++V+ + E+L Sbjct: 61 TRNYGFDEVNHHMAEQL 77 >03_05_0714 - 27076881-27077218,27077332-27077482,27077768-27077903, 27078309-27078457,27079141-27079267,27080033-27080172, 27080264-27080329,27080760-27080901,27081021-27081115, 27081640-27082140 Length = 614 Score = 29.9 bits (64), Expect = 1.8 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +3 Query: 177 NLAAYKRGTGGRSSFNGIVATVFGCTDLSDAMCATNWEKLVPS*FYHTEAIS 332 NLA +K +S NG++ATV L D C T +L+ + F ++S Sbjct: 277 NLACHKSLANAITSHNGLIATVVDQLFLDDPGCLTETFRLLSTIFQSNASMS 328 >11_06_0754 - 26935647-26937780,26940890-26941827 Length = 1023 Score = 29.1 bits (62), Expect = 3.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 Query: 541 EGVERFIHLSYLNAEEHPKPLVL 609 EG+++ + LSY N EH KP VL Sbjct: 446 EGIKQVLDLSYNNLSEHLKPCVL 468 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,536,287 Number of Sequences: 37544 Number of extensions: 299544 Number of successful extensions: 587 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 580 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 587 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1596695220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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