Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0473
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 105 2e-22
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 105 2e-22
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 105 2e-22
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 105 2e-22
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 105 2e-22
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 105 2e-22
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 105 bits (251), Expect = 2e-22
Identities = 46/94 (48%), Positives = 70/94 (74%)
Frame = +2
Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 63 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 122
Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEK 541
VVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 123 VVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 156
Score = 34.7 bits (76), Expect = 0.28
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 168 RKPNLAAYKRGTGGRSSFNGIVATVFGCT 254
R+ + A G GGRSS +GIVATVFG T
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGAT 60
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 105 bits (251), Expect = 2e-22
Identities = 46/94 (48%), Positives = 70/94 (74%)
Frame = +2
Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEK 541
VVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 125 VVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 34.7 bits (76), Expect = 0.28
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 168 RKPNLAAYKRGTGGRSSFNGIVATVFGCT 254
R+ + A G GGRSS +GIVATVFG T
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGAT 62
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 105 bits (251), Expect = 2e-22
Identities = 46/94 (48%), Positives = 70/94 (74%)
Frame = +2
Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEK 541
VVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 125 VVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 34.7 bits (76), Expect = 0.28
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 168 RKPNLAAYKRGTGGRSSFNGIVATVFGCT 254
R+ + A G GGRSS +GIVATVFG T
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGAT 62
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 105 bits (251), Expect = 2e-22
Identities = 46/94 (48%), Positives = 70/94 (74%)
Frame = +2
Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEK 541
VVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 125 VVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 34.7 bits (76), Expect = 0.28
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 168 RKPNLAAYKRGTGGRSSFNGIVATVFGCT 254
R+ + A G GGRSS +GIVATVFG T
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGAT 62
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 105 bits (251), Expect = 2e-22
Identities = 46/94 (48%), Positives = 70/94 (74%)
Frame = +2
Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 26 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 85
Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEK 541
VVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 86 VVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 119
Score = 33.9 bits (74), Expect = 0.50
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 198 GTGGRSSFNGIVATVFGCT 254
G GGRSS +GIVATVFG T
Sbjct: 5 GKGGRSSVSGIVATVFGAT 23
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 105 bits (251), Expect = 2e-22
Identities = 46/94 (48%), Positives = 70/94 (74%)
Frame = +2
Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEK 541
VVINL+GRD+ETKNF + DV V + + + + +++
Sbjct: 125 VVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 34.7 bits (76), Expect = 0.28
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 168 RKPNLAAYKRGTGGRSSFNGIVATVFGCT 254
R+ + A G GGRSS +GIVATVFG T
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGAT 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,541,235
Number of Sequences: 237096
Number of extensions: 1745106
Number of successful extensions: 2342
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2342
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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