Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0473
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical ...    91   5e-19
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC199172-10|ABO33271.1|  302|Caenorhabditis elegans F-box a prot...    28   4.9  

>AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.2 protein.
          Length = 431

 Score = 91.5 bits (217), Expect = 5e-19
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = +2

Query: 260 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 439
           +G  V NK  K G+Q+I+PYR D Y  +  KV G+LGQVL+ P+ L+DEESI KAV+YSN
Sbjct: 71  LGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGELGQVLYFPFELMDEESIRKAVKYSN 130

Query: 440 VVINLVGRDYETKNFKYNDVH 502
           VVINL+G    T  + Y DV+
Sbjct: 131 VVINLIGTRVPTGKYNYYDVN 151



 Score = 35.9 bits (79), Expect = 0.025
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 90  QATSKLLHLNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRSSFNGIVATVFGCT 254
           QA S +   N S +V   + A+         A +++G GGR+SF+G V TVFG +
Sbjct: 14  QAVSVVGSQNFSSAVTSAENAHPEPRVSSQSAQFRKGAGGRASFSGNVVTVFGAS 68


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 244 SVAPICRTLCVQQIGKNWYPVNFTIQRRFL*CPKVESVRRFRPGPV 381
           S   +C    +  I +  Y VN T+Q   + CP VES    +P PV
Sbjct: 656 STKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCDTEKPDPV 701


>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEKKELRD 556
           +++ L+G + E KN   ND+   + ++LP    K+ LRD
Sbjct: 745 IILQLLGAEKEPKNRPENDMDAVMRKDLPAIQPKRGLRD 783


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 440 VVINLVGRDYETKNFKYNDVHVDV*EELPESAEKKELRD 556
           +++ L+G + E KN   ND+   + ++LP    K+ LRD
Sbjct: 745 IILQLLGAEKEPKNRPENDMDAVMRKDLPAIQPKRGLRD 783


>AC199172-10|ABO33271.1|  302|Caenorhabditis elegans F-box a protein
           protein 37 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 194 LICCKVGFTIRTVVSGFDVHNTHRPIQMK 108
           L C KV  ++RT V   + H+TH  +Q++
Sbjct: 29  LTCRKVCRSLRTAVDKIETHSTHLTVQLR 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,010
Number of Sequences: 27780
Number of extensions: 274517
Number of successful extensions: 576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)