Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0472
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 767 MITYLHLMXKCIQV*LWFTQRXQFSXIFLIFYYHLLIFV-HYKFTFM 630
           +I  +HL+  C+ + L       F   F++F  HLL+ V  Y F +M
Sbjct: 220 IIFTIHLLFYCVLIILLCI--YYFYYAFILFTVHLLLLVCIYYFYYM 264



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 140 HVSFHLHENRRAGRLLEILPIDPLNIQPY 54
           +VS H  +N+R+G  L++  +D L  + Y
Sbjct: 23  NVSLHSLKNKRSGASLQVGILDSLVFKCY 51



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 719 WFTQRXQFSXIFLIFYYHLLIFVHY 645
           +FT    F   F+IF  H L+  +Y
Sbjct: 78  YFTVHLLFYCPFIIFTVHFLLCTYY 102


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/28 (21%), Positives = 17/28 (60%)
 Frame = +1

Query: 316 VCAILTKMAMGSSLLRNCDTCSLLSERS 399
           +C ++  +   S ++  CD C++ S+++
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQT 308


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 622 NKNV*VYFNKFLLTVSHYGSNCM 554
           N  + ++   F+   +HY SNC+
Sbjct: 324 NAGLAIFILYFICDEAHYASNCL 346


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/28 (21%), Positives = 17/28 (60%)
 Frame = +1

Query: 316 VCAILTKMAMGSSLLRNCDTCSLLSERS 399
           +C ++  +   S ++  CD C++ S+++
Sbjct: 281 LCLVIYTLVSVSLVMVTCDACTIASKQT 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,837
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)