Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0471
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   3.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.6  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 572 SAIST*IFINRIIKQ*VQRQVGRLIIFFKKWSNLTW 465
           +A  + I+I+ IIK+ V +Q   + IF   W  + W
Sbjct: 127 AAAKSLIYIDMIIKKNVTQQNSDVFIFDNVWLFILW 162


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 525 STTPSRQTHYFFQKMVQSH 469
           S+TP    HY+ QK +Q++
Sbjct: 101 SSTPESPEHYYNQKTLQAN 119


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 209 FRHLHFKMICAMSGILVKVFSTTNAQILFLYS 114
           ++HL+  ++  +SG LV + +T    I+F  S
Sbjct: 137 YKHLYVNILIHLSG-LVTIVATLTVTIIFFAS 167


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 209 FRHLHFKMICAMSGILVKVFSTTNAQILFLYS 114
           ++HL+  ++  +SG LV + +T    I+F  S
Sbjct: 137 YKHLYVNILIHLSG-LVTIVATLTVTIIFFAS 167


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 165 TSESIFHH*CPNFVPVF 115
           + E +FH  CP   P++
Sbjct: 28  SDEELFHQKCPKPAPIY 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,241
Number of Sequences: 336
Number of extensions: 4711
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)