BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0471 (724 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1218 + 24955627-24955631,24955883-24955937,24956015-249561... 74 1e-13 08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 40 0.003 12_01_0931 + 9245777-9245806,9245972-9246065,9246188-9246220,924... 35 0.075 01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 32 0.53 12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 31 0.93 04_01_0596 - 7852529-7855185,7855545-7855581 30 1.6 06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 30 2.1 05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 30 2.1 02_01_0677 - 5039344-5039793,5040415-5040462,5040540-5040776,504... 30 2.1 04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 29 2.8 06_01_0450 + 3185342-3185645,3185761-3185837,3185948-3186028,318... 29 3.7 01_05_0596 + 23511148-23512650 29 3.7 12_02_0653 + 21545862-21546584,21546661-21546696,21547182-215474... 29 4.9 07_03_0591 + 19792694-19792738,19794190-19794509,19795104-197951... 28 6.5 02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 28 8.6 01_06_1270 + 35886571-35886573,35886676-35886708,35887073-358872... 28 8.6 01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 28 8.6 >07_03_1218 + 24955627-24955631,24955883-24955937,24956015-24956131, 24957142-24957306,24957703-24957958,24957987-24958051 Length = 220 Score = 74.1 bits (174), Expect = 1e-13 Identities = 39/71 (54%), Positives = 52/71 (73%) Frame = +1 Query: 1 AQCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALVVENTFTSIPDMA 180 AQ A+D++++R D+DTSRI++FGRSLGGAV LA K+ AL++ENTFTSI DMA Sbjct: 19 AQAALDHLVQRKDIDTSRIVVFGRSLGGAVGAVLAK--NNPGKVSALILENTFTSILDMA 76 Query: 181 QIILKWRCLNW 213 I+L + L W Sbjct: 77 GIMLPF--LRW 85 >08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404, 24118477-24118648,24118737-24118839,24118927-24119181, 24119259-24119336,24119449-24119541,24119660-24119800, 24119882-24119986,24120135-24120212,24120297-24120341, 24120463-24120579,24120685-24120828,24120934-24121017, 24121139-24121232,24121322-24121447,24121585-24121658, 24121870-24122098,24123124-24123611,24123702-24123749, 24123841-24124077,24124368-24124404,24125011-24125018 Length = 1051 Score = 39.5 bits (88), Expect = 0.003 Identities = 24/74 (32%), Positives = 40/74 (54%) Frame = +3 Query: 252 EKIAHVISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGHDDTWTCREYYPS 431 EK+ V SP LVI G+ND +V S ++L+ C + + + I GG H + T Y Sbjct: 97 EKMPLVKSPVLVIHGTNDDIVDCSHGKQLWELCQNKYEPL-WIEGGDHCNLQTFPVYIRH 155 Query: 432 MQQFLVNVPALPSE 473 +++F+ + +P E Sbjct: 156 LKKFISTIENMPLE 169 >12_01_0931 + 9245777-9245806,9245972-9246065,9246188-9246220, 9246393-9246539,9248002-9248132,9248289-9248426, 9248570-9248668,9249020-9249238 Length = 296 Score = 34.7 bits (76), Expect = 0.075 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +3 Query: 267 VISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGH 395 V P +++ G +DA+ PS++ ELYT S K + + PG H Sbjct: 225 VTLPFIIVHGGDDAVTDPSVSEELYTSAQSKDKTLKLYPGMCH 267 >01_06_0322 + 28472680-28473053,28474434-28474470,28474578-28474814, 28474891-28474938,28475263-28475661 Length = 364 Score = 31.9 bits (69), Expect = 0.53 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +1 Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRL 114 + A + + E+ V IIL+G+S+G IDLASRL Sbjct: 148 EAAYNCLKEKYGVADEDIILYGQSVGSGPTIDLASRL 184 >12_01_1059 - 10934937-10935446,10938224-10938271,10938383-10938619, 10938711-10938747,10941018-10941286 Length = 366 Score = 31.1 bits (67), Expect = 0.93 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRL 114 + A ++E IIL+G+S+G +DLASRL Sbjct: 113 EAAYKCLIENFGAKEEEIILYGQSVGSGPTVDLASRL 149 >04_01_0596 - 7852529-7855185,7855545-7855581 Length = 897 Score = 30.3 bits (65), Expect = 1.6 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +1 Query: 340 IRAVDLSASKWWSYQVEDMMTPGRVGNTI-LQCNNF*LTFQHYQVRLDHFLKKIMSLPTW 516 + V S + WW+ + + + GR+ + I + C + L H LK LP++ Sbjct: 119 LERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSY 178 Query: 517 RC 522 RC Sbjct: 179 RC 180 >06_03_0843 + 25315089-25315417,25317274-25317310,25317439-25317675, 25317745-25317792,25318144-25318577,25318675-25318759 Length = 389 Score = 29.9 bits (64), Expect = 2.1 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEY 120 + A ++E IIL+G+S+G +DLASRL + Sbjct: 133 EAAYRCLVETYGATEENIILYGQSVGSGPTLDLASRLPH 171 >05_03_0415 - 13661745-13664240,13664376-13664401,13665018-13665035, 13665914-13666181,13666531-13666598,13667102-13667243 Length = 1005 Score = 29.9 bits (64), Expect = 2.1 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +1 Query: 340 IRAVDLSASKWWSYQVEDMMTPGRVGNTI-LQCNNF*LTFQHYQVRLDHFLKKIMSLPTW 516 + V S + WW+ + + + GR+ + I + C + L H LK LP++ Sbjct: 227 LERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSY 286 Query: 517 RC 522 RC Sbjct: 287 RC 288 >02_01_0677 - 5039344-5039793,5040415-5040462,5040540-5040776, 5040862-5040898,5042474-5042491,5042801-5043153 Length = 380 Score = 29.9 bits (64), Expect = 2.1 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 22 ILERTDVDTSRIILFGRSLGGAVAIDLASRLEY 120 ++E IIL+G+S+G +DLASRL + Sbjct: 153 LVETYGASEENIILYGQSVGSGPTLDLASRLPH 185 >04_04_0005 + 22095107-22095210,22095347-22095431,22095553-22095623, 22096613-22096727,22096884-22096963,22097302-22097386, 22098081-22098175,22098298-22098348,22098866-22098946, 22099659-22099731,22100057-22100134,22100224-22100256 Length = 316 Score = 29.5 bits (63), Expect = 2.8 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +1 Query: 55 IILFGRSLGGAVAIDLASRLEYRNKIWALVVE 150 IIL G S+GG+VAI +A++ RN +V++ Sbjct: 146 IILVGHSMGGSVAIHVAAKKVIRNLHGLVVID 177 >06_01_0450 + 3185342-3185645,3185761-3185837,3185948-3186028, 3186508-3186636,3186765-3186851,3186962-3187015, 3187432-3187522,3187615-3187685,3187770-3187839, 3187988-3188040,3188132-3188225,3188569-3188666, 3190126-3190209 Length = 430 Score = 29.1 bits (62), Expect = 3.7 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 16 DYILERTDVDTSRIILFGRSLGG 84 D++ ER DVD RI + G SLGG Sbjct: 253 DHLSEREDVDPCRIGITGESLGG 275 >01_05_0596 + 23511148-23512650 Length = 500 Score = 29.1 bits (62), Expect = 3.7 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Frame = -1 Query: 553 YLLIESLNSEYNAKSADSLFFSKNGPISLGSAGTLT---KNCCIEG*YSLH---VQVSSC 392 Y L++ +S +A S S +G + +A + T KN +E Y + + V Sbjct: 296 YCLVDRTSSSASATSRSSTVTFGSGAVGPSAAASFTPMVKNPRMETFYYVQLMGISVGGA 355 Query: 391 PPPGMTTICLQIDPQRVYSSLAMDGGTKAS 302 PG+ L++DP + +D GT + Sbjct: 356 RVPGVAVSDLRLDPSTGRGGVIVDSGTSVT 385 >12_02_0653 + 21545862-21546584,21546661-21546696,21547182-21547401, 21547590-21548025,21548103-21548273,21548354-21548636, 21548716-21548829,21549012-21549082,21549417-21549429 Length = 688 Score = 28.7 bits (61), Expect = 4.9 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +1 Query: 412 VGNTILQCNNF*LTFQHYQVR-LDHFLKKIMSLPTWRCTHC 531 +G T +F + HY+VR +D L K SL TW+ HC Sbjct: 440 LGPTAFIAVDFKDLWDHYRVRAIDTNLLKCYSLLTWKHVHC 480 >07_03_0591 + 19792694-19792738,19794190-19794509,19795104-19795161, 19798000-19798056,19798373-19798440,19798454-19798543, 19798619-19798820,19798902-19798988,19799642-19799719, 19799815-19800040,19800260-19800483,19801988-19802014, 19802470-19802518,19802594-19802688,19802778-19802864, 19802973-19803100,19803198-19803294,19803563-19803788, 19803888-19804294 Length = 856 Score = 28.3 bits (60), Expect = 6.5 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = +3 Query: 384 GGGHDDTWTCREYYPSMQQFLVNVPALPSEIGPFFEK--NNESADLALYSLF--NDSINK 551 GGG D T+T R ++P + L + P ++ P + + N DL +F N N+ Sbjct: 22 GGGWDPTYTRRNFFPYWRSVLRTL--CPVKVYPVYARADANSGRDLEQIRIFQSNSMANR 79 Query: 552 YLRTYCRV 575 RT R+ Sbjct: 80 STRTQNRM 87 >02_05_1073 - 33895608-33895880,33896133-33896180,33896273-33896509, 33897233-33897269,33898603-33898913 Length = 301 Score = 27.9 bits (59), Expect = 8.6 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLE 117 + D + + ++ +IL+G+S+G + LASRLE Sbjct: 127 EAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRLE 164 >01_06_1270 + 35886571-35886573,35886676-35886708,35887073-35887235, 35887307-35887437,35887593-35887730,35887814-35887912, 35888103-35888339 Length = 267 Score = 27.9 bits (59), Expect = 8.6 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +3 Query: 252 EKIAHVIS-PTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGH 395 EK H ++ P LV+ G +D + PS+++ L+ K + PG H Sbjct: 184 EKNLHEVTLPFLVLHGGDDIVTDPSVSKLLFEEASGRDKTFKLYPGMWH 232 >01_06_0736 - 31585840-31586459,31586545-31587070,31588051-31588149, 31589344-31589427,31589458-31589775,31589907-31590113 Length = 617 Score = 27.9 bits (59), Expect = 8.6 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -3 Query: 116 SKRDARSIATAPPNDLPNKIILLVSTSV 33 +KR ARS A PND+ + I L+ +T+V Sbjct: 541 NKRSARSRTKANPNDINSNIYLVQNTTV 568 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,162,979 Number of Sequences: 37544 Number of extensions: 468848 Number of successful extensions: 1003 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 973 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1000 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1886372480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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