Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0471
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1218 + 24955627-24955631,24955883-24955937,24956015-249561... 74 1e-13
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 40 0.003
12_01_0931 + 9245777-9245806,9245972-9246065,9246188-9246220,924... 35 0.075
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 32 0.53
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 31 0.93
04_01_0596 - 7852529-7855185,7855545-7855581 30 1.6
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 30 2.1
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 30 2.1
02_01_0677 - 5039344-5039793,5040415-5040462,5040540-5040776,504... 30 2.1
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 29 2.8
06_01_0450 + 3185342-3185645,3185761-3185837,3185948-3186028,318... 29 3.7
01_05_0596 + 23511148-23512650 29 3.7
12_02_0653 + 21545862-21546584,21546661-21546696,21547182-215474... 29 4.9
07_03_0591 + 19792694-19792738,19794190-19794509,19795104-197951... 28 6.5
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 28 8.6
01_06_1270 + 35886571-35886573,35886676-35886708,35887073-358872... 28 8.6
01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 28 8.6
>07_03_1218 +
24955627-24955631,24955883-24955937,24956015-24956131,
24957142-24957306,24957703-24957958,24957987-24958051
Length = 220
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +1
Query: 1 AQCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALVVENTFTSIPDMA 180
AQ A+D++++R D+DTSRI++FGRSLGGAV LA K+ AL++ENTFTSI DMA
Sbjct: 19 AQAALDHLVQRKDIDTSRIVVFGRSLGGAVGAVLAK--NNPGKVSALILENTFTSILDMA 76
Query: 181 QIILKWRCLNW 213
I+L + L W
Sbjct: 77 GIMLPF--LRW 85
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +3
Query: 252 EKIAHVISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGHDDTWTCREYYPS 431
EK+ V SP LVI G+ND +V S ++L+ C + + + I GG H + T Y
Sbjct: 97 EKMPLVKSPVLVIHGTNDDIVDCSHGKQLWELCQNKYEPL-WIEGGDHCNLQTFPVYIRH 155
Query: 432 MQQFLVNVPALPSE 473
+++F+ + +P E
Sbjct: 156 LKKFISTIENMPLE 169
>12_01_0931 +
9245777-9245806,9245972-9246065,9246188-9246220,
9246393-9246539,9248002-9248132,9248289-9248426,
9248570-9248668,9249020-9249238
Length = 296
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 267 VISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGH 395
V P +++ G +DA+ PS++ ELYT S K + + PG H
Sbjct: 225 VTLPFIIVHGGDDAVTDPSVSEELYTSAQSKDKTLKLYPGMCH 267
>01_06_0322 +
28472680-28473053,28474434-28474470,28474578-28474814,
28474891-28474938,28475263-28475661
Length = 364
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRL 114
+ A + + E+ V IIL+G+S+G IDLASRL
Sbjct: 148 EAAYNCLKEKYGVADEDIILYGQSVGSGPTIDLASRL 184
>12_01_1059 -
10934937-10935446,10938224-10938271,10938383-10938619,
10938711-10938747,10941018-10941286
Length = 366
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRL 114
+ A ++E IIL+G+S+G +DLASRL
Sbjct: 113 EAAYKCLIENFGAKEEEIILYGQSVGSGPTVDLASRL 149
>04_01_0596 - 7852529-7855185,7855545-7855581
Length = 897
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 340 IRAVDLSASKWWSYQVEDMMTPGRVGNTI-LQCNNF*LTFQHYQVRLDHFLKKIMSLPTW 516
+ V S + WW+ + + + GR+ + I + C + L H LK LP++
Sbjct: 119 LERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSY 178
Query: 517 RC 522
RC
Sbjct: 179 RC 180
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEY 120
+ A ++E IIL+G+S+G +DLASRL +
Sbjct: 133 EAAYRCLVETYGATEENIILYGQSVGSGPTLDLASRLPH 171
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 340 IRAVDLSASKWWSYQVEDMMTPGRVGNTI-LQCNNF*LTFQHYQVRLDHFLKKIMSLPTW 516
+ V S + WW+ + + + GR+ + I + C + L H LK LP++
Sbjct: 227 LERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSY 286
Query: 517 RC 522
RC
Sbjct: 287 RC 288
>02_01_0677 -
5039344-5039793,5040415-5040462,5040540-5040776,
5040862-5040898,5042474-5042491,5042801-5043153
Length = 380
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 22 ILERTDVDTSRIILFGRSLGGAVAIDLASRLEY 120
++E IIL+G+S+G +DLASRL +
Sbjct: 153 LVETYGASEENIILYGQSVGSGPTLDLASRLPH 185
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 55 IILFGRSLGGAVAIDLASRLEYRNKIWALVVE 150
IIL G S+GG+VAI +A++ RN +V++
Sbjct: 146 IILVGHSMGGSVAIHVAAKKVIRNLHGLVVID 177
>06_01_0450 +
3185342-3185645,3185761-3185837,3185948-3186028,
3186508-3186636,3186765-3186851,3186962-3187015,
3187432-3187522,3187615-3187685,3187770-3187839,
3187988-3188040,3188132-3188225,3188569-3188666,
3190126-3190209
Length = 430
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 16 DYILERTDVDTSRIILFGRSLGG 84
D++ ER DVD RI + G SLGG
Sbjct: 253 DHLSEREDVDPCRIGITGESLGG 275
>01_05_0596 + 23511148-23512650
Length = 500
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = -1
Query: 553 YLLIESLNSEYNAKSADSLFFSKNGPISLGSAGTLT---KNCCIEG*YSLH---VQVSSC 392
Y L++ +S +A S S +G + +A + T KN +E Y + + V
Sbjct: 296 YCLVDRTSSSASATSRSSTVTFGSGAVGPSAAASFTPMVKNPRMETFYYVQLMGISVGGA 355
Query: 391 PPPGMTTICLQIDPQRVYSSLAMDGGTKAS 302
PG+ L++DP + +D GT +
Sbjct: 356 RVPGVAVSDLRLDPSTGRGGVIVDSGTSVT 385
>12_02_0653 +
21545862-21546584,21546661-21546696,21547182-21547401,
21547590-21548025,21548103-21548273,21548354-21548636,
21548716-21548829,21549012-21549082,21549417-21549429
Length = 688
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 412 VGNTILQCNNF*LTFQHYQVR-LDHFLKKIMSLPTWRCTHC 531
+G T +F + HY+VR +D L K SL TW+ HC
Sbjct: 440 LGPTAFIAVDFKDLWDHYRVRAIDTNLLKCYSLLTWKHVHC 480
>07_03_0591 +
19792694-19792738,19794190-19794509,19795104-19795161,
19798000-19798056,19798373-19798440,19798454-19798543,
19798619-19798820,19798902-19798988,19799642-19799719,
19799815-19800040,19800260-19800483,19801988-19802014,
19802470-19802518,19802594-19802688,19802778-19802864,
19802973-19803100,19803198-19803294,19803563-19803788,
19803888-19804294
Length = 856
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 384 GGGHDDTWTCREYYPSMQQFLVNVPALPSEIGPFFEK--NNESADLALYSLF--NDSINK 551
GGG D T+T R ++P + L + P ++ P + + N DL +F N N+
Sbjct: 22 GGGWDPTYTRRNFFPYWRSVLRTL--CPVKVYPVYARADANSGRDLEQIRIFQSNSMANR 79
Query: 552 YLRTYCRV 575
RT R+
Sbjct: 80 STRTQNRM 87
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 4 QCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLE 117
+ D + + ++ +IL+G+S+G + LASRLE
Sbjct: 127 EAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRLE 164
>01_06_1270 +
35886571-35886573,35886676-35886708,35887073-35887235,
35887307-35887437,35887593-35887730,35887814-35887912,
35888103-35888339
Length = 267
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 252 EKIAHVIS-PTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGH 395
EK H ++ P LV+ G +D + PS+++ L+ K + PG H
Sbjct: 184 EKNLHEVTLPFLVLHGGDDIVTDPSVSKLLFEEASGRDKTFKLYPGMWH 232
>01_06_0736 -
31585840-31586459,31586545-31587070,31588051-31588149,
31589344-31589427,31589458-31589775,31589907-31590113
Length = 617
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 116 SKRDARSIATAPPNDLPNKIILLVSTSV 33
+KR ARS A PND+ + I L+ +T+V
Sbjct: 541 NKRSARSRTKANPNDINSNIYLVQNTTV 568
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,162,979
Number of Sequences: 37544
Number of extensions: 468848
Number of successful extensions: 1003
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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