Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0471
         (724 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44822| Best HMM Match : No HMM Matches (HMM E-Value=.)              93   2e-19
SB_39322| Best HMM Match : Abhydrolase_2 (HMM E-Value=0.0028)          42   4e-04
SB_47839| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_33014| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  

>SB_44822| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 184

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 1   AQCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALVVENTFTSIPDMA 180
           AQ ++D++L RTD+D ++II+FGRSLGGAVAIDL S   Y  + +ALVVENTF SIP MA
Sbjct: 6   AQASMDHLLSRTDIDPTQIIVFGRSLGGAVAIDLVSHPAYVQRAFALVVENTFVSIPAMA 65

Query: 181 QIILKWRCLNWLPQFCHKNKY--MSLKKL 261
             ++    L+ LP FC +NK    SLKKL
Sbjct: 66  NTLIAG--LHRLPYFCFRNKSSGSSLKKL 92



 Score = 33.9 bits (74), Expect = 0.13
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 351 GSICKQMVVIPGGGHDDTWTCREYYPSMQQFL-VNVPALPSEIG 479
           GS  K++    GG H+DTW C  Y  ++ +F+ + +  +  +IG
Sbjct: 86  GSSLKKLEQFEGGSHNDTWQCFGYLDAISRFIYITIFIIDDKIG 129


>SB_39322| Best HMM Match : Abhydrolase_2 (HMM E-Value=0.0028)
          Length = 253

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = +3

Query: 252 EKIAHVISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGHDDTWTCREYYPS 431
           EK++ ++SP LV+ G+ D ++  S    +Y RC      + V  G GH+D     +Y   
Sbjct: 183 EKVSKIVSPVLVVHGTEDEVIDFSHGLAIYERCPRAVDPLWV-EGAGHNDVELYGQYLER 241

Query: 432 MQQFL 446
           ++QF+
Sbjct: 242 LKQFI 246



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +1

Query: 31  RTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWA--LVVENTFTSIPDMAQ-IILKWR 201
           R  +    I+L+G+S+G    IDLAS +E  +KI +  LVV  T   + D +  + +  R
Sbjct: 155 RYGISPENIVLYGQSIGTVPTIDLASSIEKVSKIVSPVLVVHGTEDEVIDFSHGLAIYER 214

Query: 202 C 204
           C
Sbjct: 215 C 215


>SB_47839| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 319

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 556 KYLLIESLNSEYNAKSADSLFFSKNGP 476
           KYLL+ +  + YN    D  FFSK  P
Sbjct: 188 KYLLVAAYIASYNPPRTDKRFFSKKAP 214


>SB_33014| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 74

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 89  WQLIWHLVWNTGTKFGH*WWKILSLVYQ 172
           W+ IW L+WN    F + W+ + SLV Q
Sbjct: 6   WEDIWRLLWNQELVF-YRWYLLYSLVQQ 32


>SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 227

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +1

Query: 205 LNWL--PQFCHKNKYMSLKKLHM 267
           L WL  P FCH   Y++ +K+H+
Sbjct: 192 LEWLFQPSFCHPGSYVTNRKIHL 214


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,245,091
Number of Sequences: 59808
Number of extensions: 538262
Number of successful extensions: 1162
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)