Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0471
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   3.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.1  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   7.2  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   7.2  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   7.2  
AY994090-1|AAX86003.1|   85|Anopheles gambiae hyp6.2 precursor p...    23   9.6  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 414 REYYPSMQQFLVNVPA 461
           REYYPS++  ++ VPA
Sbjct: 210 REYYPSVEWDILGVPA 225


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 529 SEYNAKSADSLFFSKNGPISLGS 461
           S Y+A + D  F+ K+G IS GS
Sbjct: 647 SRYDALALDGTFYQKSGIISGGS 669


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  LERTDVDTSRIILFGRSLGGAVAIDL 102
           + R   D SR+ LFG S  GAV++ L
Sbjct: 344 IHRFGGDPSRVTLFGES-AGAVSVSL 368


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  LERTDVDTSRIILFGRSLGGAVAIDL 102
           + R   D SR+ LFG S  GAV++ L
Sbjct: 344 IHRFGGDPSRVTLFGES-AGAVSVSL 368


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  LERTDVDTSRIILFGRSLGGAVAIDL 102
           + R   D SR+ LFG S  GAV++ L
Sbjct: 230 IHRFGGDPSRVTLFGES-AGAVSVSL 254


>AY994090-1|AAX86003.1|   85|Anopheles gambiae hyp6.2 precursor
           protein.
          Length = 85

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 113 WNTGTKFG 136
           WNTGT+FG
Sbjct: 63  WNTGTRFG 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,803
Number of Sequences: 2352
Number of extensions: 19886
Number of successful extensions: 74
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)