Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0471
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical p...    42   4e-04
Z81522-7|CAB04232.1|  297|Caenorhabditis elegans Hypothetical pr...    33   0.27 
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z81050-7|CAB02853.1|  154|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U23517-2|AAB93337.1|  243|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical
           protein K04G2.2 protein.
          Length = 332

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +3

Query: 252 EKIAHVISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGHDDTWTCREYYPS 431
           EK+  V  PTLVI G++D ++  S    +Y RC +  + + V PG GH+D      Y   
Sbjct: 239 EKVPRVKCPTLVIHGTDDEVIDFSHGVSIYERCPTSVEPLWV-PGAGHNDVELHAAYLER 297

Query: 432 MQQFL 446
           ++ F+
Sbjct: 298 LRSFI 302



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 10  AIDYILERTDVDTSRIILFGRSLGGAVAIDLASR 111
           A + +     V   +IIL+G+S+G   ++DLASR
Sbjct: 170 AFELLKSEFGVPKEKIILYGQSIGTVPSVDLASR 203


>Z81522-7|CAB04232.1|  297|Caenorhabditis elegans Hypothetical
           protein F32B4.6 protein.
          Length = 297

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +1

Query: 13  IDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALVVEN 153
           ID++ + T  D  ++ L G S+GG     LA+  EY ++I +L+VE+
Sbjct: 96  IDWVRKITGED--KVNLHGHSMGGKAVTQLATTPEYSSRIKSLIVED 140


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 255 KIAHVISPTLVICGSNDALVPPSMARELYTRC-GSICKQMVVIPGGGHDDTWTCREYYPS 431
           +I  +  P LVI G  D  VP    + +  R    +  + V  PG  HD+   CRE +  
Sbjct: 424 QIHEIQIPILVIHGKADKTVPVEHGKLICQRAITKVAPEWV--PGAAHDNVENCREVWRR 481

Query: 432 MQQFL 446
           +++F+
Sbjct: 482 VRRFV 486


>Z81050-7|CAB02853.1|  154|Caenorhabditis elegans Hypothetical
           protein C50B6.9 protein.
          Length = 154

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 255 KIAHVISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGHD 398
           K+  +  P L + G  D +VP   +++L  R  S  K    IPG  H+
Sbjct: 77  KVIDIQCPVLTVHGIEDNIVPVENSKKLMQRMASTYKDFHRIPGVDHN 124


>Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical
           protein R05D7.4 protein.
          Length = 299

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +1

Query: 13  IDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALVVEN 153
           ID + E T    +R+ L G S+GG + + LA   ++ ++I  L+VE+
Sbjct: 106 IDKVKEETK--KTRVNLLGHSMGGKIVMRLAIDSKWSDRIEKLIVED 150


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 269  DMCNFFKDMY---LFLWQNCGSQFRHLHFKMICAMSGILVKVFSTTNAQ 132
            DM N FKD Y    ++W       +++H K          ++F+ TN+Q
Sbjct: 2607 DMSNVFKDQYDQTSWMWNRADLDMKNIHSKRDALRDNDDYQIFTDTNSQ 2655


>U23517-2|AAB93337.1|  243|Caenorhabditis elegans Hypothetical
           protein D1022.4 protein.
          Length = 243

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 10  AIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALV-VENTFTSIPDMA 180
           A++ +   ++VDTS+I   G   GG   +DLA    Y   +  +V    T   IPD+A
Sbjct: 103 AVNTLKTFSEVDTSKIAAIGYCFGGLCVLDLA---RYNAGLKGVVSYHGTLKPIPDIA 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,321,458
Number of Sequences: 27780
Number of extensions: 423191
Number of successful extensions: 966
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)