BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0471 (724 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.96 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.9 DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.9 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 8.9 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 24.6 bits (51), Expect = 0.96 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +3 Query: 414 REYYPSMQQFLVNVPA 461 REYYPS++ ++ VPA Sbjct: 193 REYYPSVEWDILGVPA 208 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 22.6 bits (46), Expect = 3.9 Identities = 9/32 (28%), Positives = 18/32 (56%) Frame = +3 Query: 426 PSMQQFLVNVPALPSEIGPFFEKNNESADLAL 521 P+M + +P +PS GP + ++ + L+L Sbjct: 433 PNMPGSMPTMPTMPSMAGPIRRRISDKSALSL 464 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 21.4 bits (43), Expect = 8.9 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +3 Query: 405 WTCREYYPSMQQFLVNVPALPSEI 476 WTCR+ P ++ +P LP+ I Sbjct: 487 WTCRQPEPLIELIEHWMPLLPNWI 510 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.4 bits (43), Expect = 8.9 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 511 SADSLFFSKNGPISLGS 461 S+ S FFS P SLGS Sbjct: 94 SSPSSFFSSVSPTSLGS 110 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 223,542 Number of Sequences: 438 Number of extensions: 5359 Number of successful extensions: 11 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22413960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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