Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0470
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.3  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   5.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   7.1  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 259 VHQTAIARNNPRKAVRS 309
           +HQT I  NNPR   R+
Sbjct: 46  IHQTVIYHNNPRDPNRA 62


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 732 GHFGXEPDFVVXAPAGNCADALGGTLLYSLGQDLPH 625
           GH   + DFVV     N  +A GG    +     PH
Sbjct: 12  GHLDDD-DFVVVKTRSNSPEAGGGGFWLAAASGAPH 46


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 732 GHFGXEPDFVVXAPAGNCADALGGTLLYSLGQDLPH 625
           GH   + DFVV     N  +A GG    +     PH
Sbjct: 12  GHLDDD-DFVVVKTRSNSPEAGGGGFWLAAASGAPH 46


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 636 DLPHGVHRENCD 601
           D+ HGVH E C+
Sbjct: 212 DIVHGVHNELCN 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,277
Number of Sequences: 336
Number of extensions: 2895
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)