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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0470
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0158 - 1103461-1104186                                           40   0.002
08_01_0202 - 1638978-1639571                                           39   0.006
03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427...    30   2.7  
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396...    30   2.7  
04_04_1582 - 34590698-34591199,34593849-34594690                       29   4.7  
03_01_0483 + 3689155-3689814                                           29   6.3  
03_01_0056 - 471338-471919,472013-472213                               29   6.3  
11_06_0416 + 23307984-23308281,23310083-23310900                       28   8.3  
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160           28   8.3  

>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVKG 408
           FVHQ++I  +      RS+ +GE VEFA+   E G  +A  VTGP G  VKG
Sbjct: 33  FVHQSSIKADG----FRSLAEGEQVEFAISESEDGRTKAVDVTGPDGSFVKG 80



 Score = 36.3 bits (80), Expect = 0.031
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 170 AEKVSGTVKWFNVKSGYGFINRNDTKED 253
           A +  GTVKWFN   G+GFI+ +D  ED
Sbjct: 4   AARHRGTVKWFNDTKGFGFISPDDGSED 31


>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 170 AEKVSGTVKWFNVKSGYGFINRNDTKED 253
           +E+V GTVKWF+   G+GFI  +D  ED
Sbjct: 3   SERVKGTVKWFDATKGFGFITPDDGGED 30



 Score = 38.3 bits (85), Expect = 0.008
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +1

Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVK-GSPYAADK 429
           FVHQ+++  +      RS+ DG+ VEF+V +G  G  +A  VT PGG  +  GS  +   
Sbjct: 32  FVHQSSLKSDG----YRSLNDGDVVEFSVGSGNDGRTKAVDVTAPGGGALTGGSRPSGGG 87

Query: 430 RRGY 441
            RGY
Sbjct: 88  DRGY 91


>03_06_0609 -
           35042276-35042388,35042476-35042527,35042624-35042725,
           35043546-35043745,35045258-35045336,35045541-35045595,
           35045947-35046122,35046386-35046988,35047077-35047265,
           35048150-35048201,35048289-35048356,35048873-35048911,
           35048912-35048970,35049639-35049782,35050136-35050238,
           35050368-35050467,35050596-35050612
          Length = 716

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 384 TSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGSLMHKPSSLVSFL 232
           T N   ++ FLP   G +  L + D   ++ W ++ + SL HK  S   F+
Sbjct: 293 TENDCAWQRFLPS--GPIALLPIGDNYSNIVWTMSPEESLRHKSMSPEDFV 341


>03_06_0157 -
           32039020-32039175,32039267-32039338,32039478-32039602,
           32039678-32040559,32040623-32040692,32041248-32041739,
           32041985-32042044,32042541-32042618,32043322-32044344
          Length = 985

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 319 GEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 408
           GE+ E  ++ GE   E   V GPGGEP  G
Sbjct: 388 GESKEDEIIEGEPDPEMEVVAGPGGEPKVG 417


>04_04_1582 - 34590698-34591199,34593849-34594690
          Length = 447

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 313 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
           GDG   E +   G+KG    G  G GG   KGS  ++++ R
Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQER 269


>03_01_0483 + 3689155-3689814
          Length = 219

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +1

Query: 313 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
           GDG A      AG  G +AA   G G +PV+GS   +D  RG
Sbjct: 62  GDGGADPVRGSAG--GSDAARGDGGGADPVRGSAGGSDAARG 101


>03_01_0056 - 471338-471919,472013-472213
          Length = 260

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 689 LEIARTHSAEPSSIHWARTSPTASTAKI-ATEKTALRW 579
           L+IA   +A P+S      SP+ +T ++ A +K A+RW
Sbjct: 199 LKIAGCEAAAPASCQPVPASPSGATGELSAQQKAAMRW 236


>11_06_0416 + 23307984-23308281,23310083-23310900
          Length = 371

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 469 HLDEGNIGGGSHGACLQHKVSLLLAHH 389
           HLD+ N+ G  +G   + K+SLL A H
Sbjct: 89  HLDDPNVDGVRNGVRARFKISLLAAAH 115


>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
          Length = 749

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
 Frame = +1

Query: 232 QE*HQGRWFV--HQTAIARNNPRKAVRSVGDGEA----VEFAVVAGEKGFEAAGVTGPGG 393
           Q+ H G   +  HQ    +  P+    S  DG A    +E +   G    E+ G  G GG
Sbjct: 17  QQHHNGHHLLDQHQQHQHQLPPQATTTSESDGRAPRDELEMSKSGGSDNLESGGGGGGGG 76

Query: 394 EPVKGSPYAADKRRGYHR 447
                 P    +++ YHR
Sbjct: 77  SGGDQDPNQRPRKKRYHR 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,756,783
Number of Sequences: 37544
Number of extensions: 381631
Number of successful extensions: 1355
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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