BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0470 (858 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0158 - 1103461-1104186 40 0.002 08_01_0202 - 1638978-1639571 39 0.006 03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427... 30 2.7 03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 30 2.7 04_04_1582 - 34590698-34591199,34593849-34594690 29 4.7 03_01_0483 + 3689155-3689814 29 6.3 03_01_0056 - 471338-471919,472013-472213 29 6.3 11_06_0416 + 23307984-23308281,23310083-23310900 28 8.3 08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 28 8.3 >02_01_0158 - 1103461-1104186 Length = 241 Score = 40.3 bits (90), Expect = 0.002 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = +1 Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVKG 408 FVHQ++I + RS+ +GE VEFA+ E G +A VTGP G VKG Sbjct: 33 FVHQSSIKADG----FRSLAEGEQVEFAISESEDGRTKAVDVTGPDGSFVKG 80 Score = 36.3 bits (80), Expect = 0.031 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 170 AEKVSGTVKWFNVKSGYGFINRNDTKED 253 A + GTVKWFN G+GFI+ +D ED Sbjct: 4 AARHRGTVKWFNDTKGFGFISPDDGSED 31 >08_01_0202 - 1638978-1639571 Length = 197 Score = 38.7 bits (86), Expect = 0.006 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +2 Query: 170 AEKVSGTVKWFNVKSGYGFINRNDTKED 253 +E+V GTVKWF+ G+GFI +D ED Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGED 30 Score = 38.3 bits (85), Expect = 0.008 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = +1 Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVK-GSPYAADK 429 FVHQ+++ + RS+ DG+ VEF+V +G G +A VT PGG + GS + Sbjct: 32 FVHQSSLKSDG----YRSLNDGDVVEFSVGSGNDGRTKAVDVTAPGGGALTGGSRPSGGG 87 Query: 430 RRGY 441 RGY Sbjct: 88 DRGY 91 >03_06_0609 - 35042276-35042388,35042476-35042527,35042624-35042725, 35043546-35043745,35045258-35045336,35045541-35045595, 35045947-35046122,35046386-35046988,35047077-35047265, 35048150-35048201,35048289-35048356,35048873-35048911, 35048912-35048970,35049639-35049782,35050136-35050238, 35050368-35050467,35050596-35050612 Length = 716 Score = 29.9 bits (64), Expect = 2.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -1 Query: 384 TSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGSLMHKPSSLVSFL 232 T N ++ FLP G + L + D ++ W ++ + SL HK S F+ Sbjct: 293 TENDCAWQRFLPS--GPIALLPIGDNYSNIVWTMSPEESLRHKSMSPEDFV 341 >03_06_0157 - 32039020-32039175,32039267-32039338,32039478-32039602, 32039678-32040559,32040623-32040692,32041248-32041739, 32041985-32042044,32042541-32042618,32043322-32044344 Length = 985 Score = 29.9 bits (64), Expect = 2.7 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 319 GEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 408 GE+ E ++ GE E V GPGGEP G Sbjct: 388 GESKEDEIIEGEPDPEMEVVAGPGGEPKVG 417 >04_04_1582 - 34590698-34591199,34593849-34594690 Length = 447 Score = 29.1 bits (62), Expect = 4.7 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 313 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435 GDG E + G+KG G G GG KGS ++++ R Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQER 269 >03_01_0483 + 3689155-3689814 Length = 219 Score = 28.7 bits (61), Expect = 6.3 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +1 Query: 313 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438 GDG A AG G +AA G G +PV+GS +D RG Sbjct: 62 GDGGADPVRGSAG--GSDAARGDGGGADPVRGSAGGSDAARG 101 >03_01_0056 - 471338-471919,472013-472213 Length = 260 Score = 28.7 bits (61), Expect = 6.3 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -2 Query: 689 LEIARTHSAEPSSIHWARTSPTASTAKI-ATEKTALRW 579 L+IA +A P+S SP+ +T ++ A +K A+RW Sbjct: 199 LKIAGCEAAAPASCQPVPASPSGATGELSAQQKAAMRW 236 >11_06_0416 + 23307984-23308281,23310083-23310900 Length = 371 Score = 28.3 bits (60), Expect = 8.3 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 469 HLDEGNIGGGSHGACLQHKVSLLLAHH 389 HLD+ N+ G +G + K+SLL A H Sbjct: 89 HLDDPNVDGVRNGVRARFKISLLAAAH 115 >08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 Length = 749 Score = 28.3 bits (60), Expect = 8.3 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%) Frame = +1 Query: 232 QE*HQGRWFV--HQTAIARNNPRKAVRSVGDGEA----VEFAVVAGEKGFEAAGVTGPGG 393 Q+ H G + HQ + P+ S DG A +E + G E+ G G GG Sbjct: 17 QQHHNGHHLLDQHQQHQHQLPPQATTTSESDGRAPRDELEMSKSGGSDNLESGGGGGGGG 76 Query: 394 EPVKGSPYAADKRRGYHR 447 P +++ YHR Sbjct: 77 SGGDQDPNQRPRKKRYHR 94 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,756,783 Number of Sequences: 37544 Number of extensions: 381631 Number of successful extensions: 1355 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1354 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2397465936 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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