Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0470
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 101 4e-21
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 101 4e-21
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 101 4e-21
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 101 4e-21
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 101 4e-21
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 101 4e-21
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 101 4e-21
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 101 4e-21
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 101 4e-21
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 99 1e-20
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 100 1e-20
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 100 1e-20
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 100 1e-20
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 100 1e-20
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 100 1e-20
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 100 1e-20
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 100 1e-20
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 100 1e-20
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 99 2e-20
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 97 5e-20
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 97 5e-20
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 97 5e-20
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 93 9e-19
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 92 2e-18
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 44 0.001
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 44 0.001
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 44 0.001
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 44 0.001
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 44 0.001
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 44 0.001
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 44 0.001
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 44 0.001
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 44 0.001
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 40 0.015
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 40 0.015
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 40 0.015
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 40 0.015
Z23090-1|CAA80636.1| 205|Homo sapiens 28 kDa heat shock protein... 31 4.1
X54079-1|CAA38016.1| 205|Homo sapiens protein ( Human mRNA for ... 31 4.1
U90906-1|AAB51056.1| 205|Homo sapiens heat shock protein protein. 31 4.1
L39370-1|AAA62175.1| 199|Homo sapiens heat shock protein 27 pro... 31 4.1
DQ379985-1|ABC88475.1| 205|Homo sapiens heat shock 27kDa protei... 31 4.1
CR536489-1|CAG38728.1| 205|Homo sapiens HSPB1 protein. 31 4.1
CR407614-1|CAG28542.1| 205|Homo sapiens HSPB1 protein. 31 4.1
BT019888-1|AAV38691.1| 205|Homo sapiens heat shock 27kDa protei... 31 4.1
BC073768-1|AAH73768.1| 205|Homo sapiens heat shock 27kDa protei... 31 4.1
BC014920-1|AAH14920.1| 191|Homo sapiens Unknown (protein for IM... 31 4.1
BC012768-1|AAH12768.1| 205|Homo sapiens heat shock 27kDa protei... 31 4.1
BC012292-1|AAH12292.1| 205|Homo sapiens heat shock 27kDa protei... 31 4.1
BC000510-1|AAH00510.1| 205|Homo sapiens heat shock 27kDa protei... 31 4.1
AB020027-1|BAB17232.1| 205|Homo sapiens HSP27 protein. 31 4.1
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 31 5.4
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 31 5.4
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 7.1
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 7.1
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 7.1
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 7.1
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 7.1
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 7.1
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 187 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 246
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 247 -YRRGYY 252
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKED 185
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 101 bits (241), Expect = 4e-21
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 50 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 109
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 110 -YRRGYY 115
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKED 48
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 99 bits (238), Expect = 1e-20
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RS+GDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+RR
Sbjct: 117 FVHQTAIKKNNPRKYLRSLGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
Query: 436 GYHRQYF 456
Y R Y+
Sbjct: 177 -YRRGYY 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 84 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 141
Query: 436 GYHRQY 453
++R+Y
Sbjct: 142 NHYRRY 147
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKED 82
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 82 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 139
Query: 436 GYHRQY 453
++R+Y
Sbjct: 140 NHYRRY 145
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKED 80
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 125 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 182
Query: 436 GYHRQY 453
++R+Y
Sbjct: 183 NHYRRY 188
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKED 123
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 99.1 bits (236), Expect = 2e-20
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD R
Sbjct: 85 FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGEEAANVTGPGGVPVQGSKYAAD--R 142
Query: 436 GYHRQY 453
++R+Y
Sbjct: 143 NHYRRY 148
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFINRNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 97.5 bits (232), Expect = 5e-20
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 120 FVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
Query: 436 GYHRQYFP 459
R++ P
Sbjct: 180 S--RRFIP 185
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A +V GTVKWFNV++GYGFINRNDTKED
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKED 118
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 97.5 bits (232), Expect = 5e-20
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 120 FVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
Query: 436 GYHRQYFP 459
R++ P
Sbjct: 180 S--RRFIP 185
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A +V GTVKWFNV++GYGFINRNDTKED
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKED 118
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 97.5 bits (232), Expect = 5e-20
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 120 FVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
Query: 436 GYHRQYFP 459
R++ P
Sbjct: 180 S--RRFIP 185
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
V+A +V GTVKWFNV++GYGFINRNDTKED
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKED 118
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 93.5 bits (222), Expect = 9e-19
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVH TA +NNPRK +RSVGDGE VEF VV GEKG +AA VTGPGG PV+GS YAAD R
Sbjct: 81 FVHHTAXKKNNPRKYLRSVGDGEXVEFDVVEGEKGAKAANVTGPGGVPVQGSKYAAD--R 138
Query: 436 GYHRQY 453
++R+Y
Sbjct: 139 NHYRRY 144
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV GTVKWFNV++GYGFI+RNDTKED
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKED 79
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 92.3 bits (219), Expect = 2e-18
Identities = 45/68 (66%), Positives = 52/68 (76%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 24 FPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 83
Query: 436 GYHRQYFP 459
R++ P
Sbjct: 84 S--RRFIP 89
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 63 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 31 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 65
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 63 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 31 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 65
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 40 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 8 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 42
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 40 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 8 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 42
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 40 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 8 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 42
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 40 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 8 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 42
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 40 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 8 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 42
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 63 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 31 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 65
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 411
FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 63 FVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GFI+ +G + +P V H
Sbjct: 31 TGHCKWFNVRMGFGFISM--INREGSPLDIPVDVFVH 65
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 39.5 bits (88), Expect = 0.015
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 393
FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 73 FVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GF++ T G+ + P V H
Sbjct: 41 AGICKWFNVRMGFGFLSM--TARAGVALDPPVDVFVH 75
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 39.5 bits (88), Expect = 0.015
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 393
FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 73 FVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GF++ T G+ + P V H
Sbjct: 41 AGICKWFNVRMGFGFLSM--TARAGVALDPPVDVFVH 75
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 39.5 bits (88), Expect = 0.015
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 393
FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 73 FVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GF++ T G+ + P V H
Sbjct: 41 AGICKWFNVRMGFGFLSM--TARAGVALDPPVDVFVH 75
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 39.5 bits (88), Expect = 0.015
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 393
FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 73 FVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 182 SGTVKWFNVKSGYGFINRNDTKEDGLCIRLPSPVTTH 292
+G KWFNV+ G+GF++ T G+ + P V H
Sbjct: 41 AGICKWFNVRMGFGFLSM--TARAGVALDPPVDVFVH 75
>Z23090-1|CAA80636.1| 205|Homo sapiens 28 kDa heat shock protein
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>X54079-1|CAA38016.1| 205|Homo sapiens protein ( Human mRNA for
heat shock protein HSP27. ).
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>U90906-1|AAB51056.1| 205|Homo sapiens heat shock protein protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>L39370-1|AAA62175.1| 199|Homo sapiens heat shock protein 27
protein.
Length = 199
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>DQ379985-1|ABC88475.1| 205|Homo sapiens heat shock 27kDa protein 1
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>CR536489-1|CAG38728.1| 205|Homo sapiens HSPB1 protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>CR407614-1|CAG28542.1| 205|Homo sapiens HSPB1 protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>BT019888-1|AAV38691.1| 205|Homo sapiens heat shock 27kDa protein 1
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>BC073768-1|AAH73768.1| 205|Homo sapiens heat shock 27kDa protein 1
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>BC014920-1|AAH14920.1| 191|Homo sapiens Unknown (protein for
IMAGE:3906970) protein.
Length = 191
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 25 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 82
Query: 779 AXLKV 793
L V
Sbjct: 83 VSLDV 87
>BC012768-1|AAH12768.1| 205|Homo sapiens heat shock 27kDa protein 1
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>BC012292-1|AAH12292.1| 205|Homo sapiens heat shock 27kDa protein 1
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>BC000510-1|AAH00510.1| 205|Homo sapiens heat shock 27kDa protein 1
protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>AB020027-1|BAB17232.1| 205|Homo sapiens HSP27 protein.
Length = 205
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 599 PSQFSRWTPWGRSWPNE*RRVPPSASAQFPAGAXTTKSGSXPKWPGLEIASVQHSTNQXG 778
P ++S+W G SWP R +PP A+ + PA A S + + ++ ++H+ ++
Sbjct: 39 PEEWSQWLG-GSSWPGYVRPLPP-AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWR 96
Query: 779 AXLKV 793
L V
Sbjct: 97 VSLDV 101
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 798 LVTFXLAPCWLVECCTEAISN 736
LV F L+PCW +CC + + N
Sbjct: 764 LVLFNLSPCWQWDCCGQGLGN 784
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 798 LVTFXLAPCWLVECCTEAISN 736
LV F L+PCW +CC + + N
Sbjct: 756 LVLFNLSPCWQWDCCGQGLGN 776
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 438
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,810,180
Number of Sequences: 237096
Number of extensions: 2051689
Number of successful extensions: 6342
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6342
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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