Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0470
(858 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 105 6e-23
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 105 6e-23
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 100 5e-21
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 31 2.0
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 31 2.0
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 31 2.0
AY089654-1|AAL90392.1| 706|Drosophila melanogaster RH12258p pro... 29 6.2
AE014296-1061|AAF50702.3| 866|Drosophila melanogaster CG6619-PA... 29 6.2
BT029040-1|ABJ16973.1| 460|Drosophila melanogaster IP03738p pro... 29 8.2
AY118297-1|AAM48326.1| 659|Drosophila melanogaster GH07242p pro... 29 8.2
AE014298-478|AAN09091.2| 627|Drosophila melanogaster CG3588-PC,... 29 8.2
AE014298-477|AAZ52489.1| 655|Drosophila melanogaster CG3588-PD,... 29 8.2
AE014298-476|AAN09092.1| 655|Drosophila melanogaster CG3588-PA,... 29 8.2
AE014298-475|AAF45833.2| 887|Drosophila melanogaster CG3588-PB,... 29 8.2
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 105 bits (253), Expect = 6e-23
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADKRR
Sbjct: 88 FVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRR 147
Query: 436 GY 441
+
Sbjct: 148 NF 149
Score = 63.3 bits (147), Expect = 4e-10
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV+GTVKWFNVKSGYGFINRNDT+ED
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTRED 86
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 105 bits (253), Expect = 6e-23
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADKRR
Sbjct: 88 FVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRR 147
Query: 436 GY 441
+
Sbjct: 148 NF 149
Score = 63.3 bits (147), Expect = 4e-10
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV+GTVKWFNVKSGYGFINRNDT+ED
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTRED 86
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = +1
Query: 256 FVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 435
FVHQ+AIA NNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AADKRR
Sbjct: 89 FVHQSAIA-NNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRR 147
Query: 436 GY 441
+
Sbjct: 148 NF 149
Score = 63.3 bits (147), Expect = 4e-10
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 164 VIAEKVSGTVKWFNVKSGYGFINRNDTKED 253
VIA KV+GTVKWFNVKSGYGFINRNDT+ED
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTRED 87
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 185 GTVKWFNVKSGYGFINRND 241
G KWFNV G+GF+ ND
Sbjct: 41 GKCKWFNVAKGWGFLTPND 59
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 185 GTVKWFNVKSGYGFINRND 241
G KWFNV G+GF+ ND
Sbjct: 41 GKCKWFNVAKGWGFLTPND 59
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 185 GTVKWFNVKSGYGFINRND 241
G KWFNV G+GF+ ND
Sbjct: 41 GKCKWFNVAKGWGFLTPND 59
>AY089654-1|AAL90392.1| 706|Drosophila melanogaster RH12258p
protein.
Length = 706
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 211 EWIWFHQQE*HQGRWFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF 363
E + ++E +G+W H ++ A S DGE V VAGE GF
Sbjct: 86 ERVHLRERELLEGKWKTH--SLPARKKANANTSPSDGEGVSPTEVAGEAGF 134
>AE014296-1061|AAF50702.3| 866|Drosophila melanogaster CG6619-PA
protein.
Length = 866
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 211 EWIWFHQQE*HQGRWFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF 363
E + ++E +G+W H ++ A S DGE V VAGE GF
Sbjct: 245 ERVHLRERELLEGKWKTH--SLPARKKANANTSPSDGEGVSPTEVAGEAGF 293
>BT029040-1|ABJ16973.1| 460|Drosophila melanogaster IP03738p
protein.
Length = 460
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 IARNNPRKAVRSVGDGEAVEFAVVAGE-KGFEAAGVTGPGGEPVKGSPYAAD 426
+AR P DG V AV+A + G AG T G PV G+ AAD
Sbjct: 202 VARAVPATDGNGAPDGVPVAGAVLATDGNGAPVAGATDGNGAPVAGAVPAAD 253
>AY118297-1|AAM48326.1| 659|Drosophila melanogaster GH07242p
protein.
Length = 659
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 783 LAPCWLVECCTEAISNPGHFGXEPDFVVXAP 691
L CWL C +A + G FG +P F P
Sbjct: 8 LIVCWLAVCQPQAEAQFGGFGFQPQFAYQQP 38
>AE014298-478|AAN09091.2| 627|Drosophila melanogaster CG3588-PC,
isoform C protein.
Length = 627
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 783 LAPCWLVECCTEAISNPGHFGXEPDFVVXAP 691
L CWL C +A + G FG +P F P
Sbjct: 8 LIVCWLAVCQPQAEAQFGGFGFQPQFAYQQP 38
>AE014298-477|AAZ52489.1| 655|Drosophila melanogaster CG3588-PD,
isoform D protein.
Length = 655
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 783 LAPCWLVECCTEAISNPGHFGXEPDFVVXAP 691
L CWL C +A + G FG +P F P
Sbjct: 8 LIVCWLAVCQPQAEAQFGGFGFQPQFAYQQP 38
>AE014298-476|AAN09092.1| 655|Drosophila melanogaster CG3588-PA,
isoform A protein.
Length = 655
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 783 LAPCWLVECCTEAISNPGHFGXEPDFVVXAP 691
L CWL C +A + G FG +P F P
Sbjct: 8 LIVCWLAVCQPQAEAQFGGFGFQPQFAYQQP 38
>AE014298-475|AAF45833.2| 887|Drosophila melanogaster CG3588-PB,
isoform B protein.
Length = 887
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 783 LAPCWLVECCTEAISNPGHFGXEPDFVVXAP 691
L CWL C +A + G FG +P F P
Sbjct: 8 LIVCWLAVCQPQAEAQFGGFGFQPQFAYQQP 38
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,933,125
Number of Sequences: 53049
Number of extensions: 591340
Number of successful extensions: 1748
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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