Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0469
(538 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 118 1e-25
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 115 8e-25
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 88 1e-16
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 85 1e-15
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 80 4e-14
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 76 6e-13
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 74 2e-12
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 73 3e-12
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 71 1e-11
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 70 4e-11
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 67 2e-10
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 66 5e-10
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 64 1e-09
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 63 3e-09
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 62 1e-08
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 62 1e-08
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 62 1e-08
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 61 1e-08
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 60 2e-08
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 60 3e-08
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 60 4e-08
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 59 6e-08
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 58 1e-07
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 58 1e-07
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 58 2e-07
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 58 2e-07
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 57 2e-07
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 57 2e-07
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 57 3e-07
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 57 3e-07
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 57 3e-07
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 56 4e-07
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 56 4e-07
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 56 5e-07
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 55 9e-07
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 54 3e-06
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 53 4e-06
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 53 4e-06
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 53 5e-06
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 52 1e-05
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 51 1e-05
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 48 1e-04
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 47 2e-04
UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5; Archae... 47 3e-04
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 46 6e-04
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 45 0.001
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 44 0.002
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 43 0.005
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 42 0.009
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.11
UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus... 37 0.26
UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4; Thermo... 37 0.26
UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeu... 36 0.59
UniRef50_A4YCQ3 Cluster: Ribosomal protein L24E; n=1; Metallosph... 34 1.8
UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:... 32 7.3
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 118 bits (283), Expect = 1e-25
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K+ LC++SGYKIYPGHG+ +VDGK F FLN+KCE+A L +RNPR++ WTVLYRRK KK
Sbjct: 2 KVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKK 61
Query: 219 GQEEEQAKKRTR 254
GQ EE +KKRTR
Sbjct: 62 GQSEEVSKKRTR 73
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2
Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
+KG SK+ R KFQRAI GASL++I+AKRN KPEVR
Sbjct: 60 KKGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEVR 101
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 115 bits (276), Expect = 8e-25
Identities = 48/72 (66%), Positives = 58/72 (80%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K+ LC++SGYKIYPGHG+ + DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KK
Sbjct: 2 KVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKK 61
Query: 219 GQEEEQAKKRTR 254
GQ EE KKRTR
Sbjct: 62 GQSEEIQKKRTR 73
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/42 (61%), Positives = 29/42 (69%)
Frame = +2
Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
+KG K+ R KFQRAI GASL+DIMAKRN KPEVR
Sbjct: 60 KKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEVR 101
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 87.8 bits (208), Expect = 1e-16
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +3
Query: 54 AYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 233
++SG KIYPG GK ++ D K F F N K E+ L R+NPRK++WT LYRR KKG EE
Sbjct: 7 SFSGQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEE 66
Query: 234 QAKKRTR 254
AKKRTR
Sbjct: 67 VAKKRTR 73
Score = 37.9 bits (84), Expect = 0.15
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2
Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
+KG +K+ RT K QRAIVGASL I +R+ +PE R
Sbjct: 60 KKGISEEVAKKRTRRTVKHQRAIVGASLDVIKERRSQRPEAR 101
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 84.6 bits (200), Expect = 1e-15
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K+ C YSGYKI+PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K KK
Sbjct: 2 KVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKK 61
Query: 219 GQ--EEEQAKKRTR 254
G +E+ +K+T+
Sbjct: 62 GTHGQEQVTRKKTK 75
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 79.8 bits (188), Expect = 4e-14
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K+ + ++SG KIYPG G V+ D K F F NSK + R+NPR++ WTVL+R+ KK
Sbjct: 2 KVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKK 61
Query: 219 GQEEEQAKKRTR 254
G EE AKKR+R
Sbjct: 62 GITEEVAKKRSR 73
Score = 35.9 bits (79), Expect = 0.59
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
+KG +K+ +T K QR I GASL I +R++KPEVR
Sbjct: 60 KKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVR 101
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 75.8 bits (178), Expect = 6e-13
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 114 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTR 254
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE +KKRTR
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTR 53
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2
Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
+KG + SK+ R KFQR++ GASL +I+AKRN KPEVR
Sbjct: 40 KKGTQEEVSKKRTRRNIKFQRSVQGASLDNILAKRNQKPEVR 81
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 74.1 bits (174), Expect = 2e-12
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K LC +SG KIYPG G ++ D + F FLNSKC+ + P K+ WT +YR++ KK
Sbjct: 4 KTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKK 63
Query: 219 GQEEEQAKKRTRGPK 263
+E K+R R K
Sbjct: 64 DAAQEAVKRRRRATK 78
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 SNKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKF 212
S K +CA+SG+KI G+ V++D K+FTF+N K L + NPRKV WT +YR+
Sbjct: 2 SIKTQVCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLN 61
Query: 213 KKGQEEEQA-KKRTR 254
KKGQ+ E KK+TR
Sbjct: 62 KKGQQNELVEKKKTR 76
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K LC YS +KIYP G V+ D K F F+N+K E+ + NPR + W+++YRR +K
Sbjct: 2 KTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKN 61
Query: 219 GQEEEQAKKRTRGPK 263
+ AKK+ R K
Sbjct: 62 TTTDVSAKKKARKTK 76
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 233 TSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
++K+ +T+K +R IVGASL I KR KPEV+
Sbjct: 67 SAKKKARKTKKVERNIVGASLEVIQQKRAQKPEVK 101
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 69.7 bits (163), Expect = 4e-11
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K LC +S YK+YPG G V+ DG+TF FL+ K + H + +TWT ++RRK +K
Sbjct: 4 KTELCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRK 63
Query: 219 GQEEEQAKKRTR 254
G + A+ RT+
Sbjct: 64 GAYAKAARVRTK 75
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K LC++S ++IYPGHG+ V DG+ F +LN K A + +++ WTV +RR KK
Sbjct: 4 KTDLCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNKK 63
Query: 219 GQEEEQAKKR 248
+ +E AKKR
Sbjct: 64 IKTDEGAKKR 73
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 66.1 bits (154), Expect = 5e-10
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKG 221
C++ GY+I PG GK +V+ DG F +SKCE ++ M RNPRK+ WT +Y + + KK
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKA 66
Query: 222 QEEE 233
QE +
Sbjct: 67 QESQ 70
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K LC+YS Y+IYPG G+ V DG+ TFLN KC + + P K+ W+V +RR KK
Sbjct: 9 KTDLCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNKK 68
Query: 219 GQEEEQAKKR 248
+ KR
Sbjct: 69 LTNQGATSKR 78
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 63.3 bits (147), Expect = 3e-09
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 203
+I C + G IYPGHG V+ D K F F SKC + M+RNPRK WT YR
Sbjct: 2 RIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 61.7 bits (143), Expect = 1e-08
Identities = 25/72 (34%), Positives = 43/72 (59%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
+ G C++ Y+IYPG G+ + DG+ F FL K + L + +K+TWT+ RR +KK
Sbjct: 4 RTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKK 63
Query: 219 GQEEEQAKKRTR 254
+ + A+K+ +
Sbjct: 64 VKATDIAQKKKK 75
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 230
C ++ Y++YPG GK V DGK + F+N K A H + P K+ W + +R+ KK Q E
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTE 76
Query: 231 EQAKKRTR 254
+KR++
Sbjct: 77 LFNRKRSK 84
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
++ C + +YPGHG V+ D K F F SKC M+RNPRKV WT YR+ K
Sbjct: 2 RVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHGK 61
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 61.3 bits (142), Expect = 1e-08
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C Y IYPGHG T V+ D K F F SKC M+ NPRK WT YR+
Sbjct: 7 RIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 60.5 bits (140), Expect = 2e-08
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + KIYPGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 2 RIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 60.1 bits (139), Expect = 3e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +3
Query: 159 MRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTR 254
M+RNPRKVTWTVLYRRK +KG EEE +KKRTR
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTR 32
Score = 58.8 bits (136), Expect = 7e-08
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +2
Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
+KG SK+ RTQKFQRAIVGASL++I+AKRNMKPEVR
Sbjct: 19 RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVR 60
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 59.7 bits (138), Expect = 4e-08
Identities = 36/106 (33%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR----RKFKK 218
C + IYPGHG V+ D K F F SKC M+RNPRKV WT +R + K
Sbjct: 6 CWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTK 65
Query: 219 GQEEEQAKKRTRGPKSSNXXXXXXXXXXXXXXXI*SLKYVKRXENR 356
E KKR R + I + + K ENR
Sbjct: 66 DTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENR 111
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 59.3 bits (137), Expect = 6e-08
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
+I C Y IYPGHG ++ D + F F SKC + NPRKV WT +YR++ K
Sbjct: 2 RIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERNK 61
Query: 219 GQEEEQ 236
+++
Sbjct: 62 ELNDDK 67
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K C++S Y+IYPG G+ + DGK + +L+SK + L ++ K+ WT +RR KK
Sbjct: 9 KTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKK 68
Query: 219 GQEEEQAKKR 248
+ E ++R
Sbjct: 69 TKVEATQRRR 78
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
K C++S Y+IYPG G+ + DGK + +L+SK + L ++ K+ WT +RR KK
Sbjct: 9 KTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKK 68
Query: 219 GQEEEQAKKR 248
+ E ++R
Sbjct: 69 TKVEATQRRR 78
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 2 RIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
++ C + YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 2 RVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 57.2 bits (132), Expect = 2e-07
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
++ C + +YPGHG V+ D K F F +KC ++NPRK+ WT YR+ K
Sbjct: 2 RVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHGK 61
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = +3
Query: 36 NKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
NK LC+ + IYPGHG V+ D K F F SKC + NPRK+ WT YRR
Sbjct: 4 NKCWLCSSN---IYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRR 57
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 2 RIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 56.8 bits (131), Expect = 3e-07
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
+I C++ G I+PGHG V+ D K F F SKC + ++NPRK +WT +R K
Sbjct: 3 RIEKCSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMGK 62
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 2 RIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 56.4 bits (130), Expect = 4e-07
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 203
+I C++ +YPG G V+ D + F F SKC M+RNPRKV WT YR
Sbjct: 3 RIEHCSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYR 57
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 56.4 bits (130), Expect = 4e-07
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
C+YSG KI PG+GK M + D FLN K +L + NPRK+ WT+ RR
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR 58
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 56.0 bits (129), Expect = 5e-07
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 48 LCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 206
+C++ GY I PG GK V+ DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 5 VCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 55.2 bits (127), Expect = 9e-07
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + +YPGHG V+ D K F F SKC ++RNPRK WT +R+
Sbjct: 2 RIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + YPG G T V+ D K F F SKC ++RNPRKV WT +R+
Sbjct: 2 RIEHCFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 53.6 bits (123), Expect = 3e-06
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 203
++ C + +YP G T V+ D K+F F SKC A M+R PRK+ WT +R
Sbjct: 2 RVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 53.2 bits (122), Expect = 4e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 33 SNKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKF 212
S K +C +SG+ + GHG+ ++ D F + K +RNPRK+ WT YR
Sbjct: 2 STKTEICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDH 61
Query: 213 KKGQEEEQA-KKRTRGPKSS 269
KK + A +KR + K++
Sbjct: 62 KKSVADTAATEKRAQRKKAT 81
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 53.2 bits (122), Expect = 4e-06
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + IYPGHG V+ D K F F SKC + NPRK WT +R+
Sbjct: 2 RIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/60 (41%), Positives = 29/60 (48%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
+I C IYPGHG V+ D K F F SKC + NPRK+ WT RR K
Sbjct: 2 RIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHGK 61
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
+I C + IY GHG V+ D K F F KC R NPRKV WT + R+ K
Sbjct: 2 RIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMANK 61
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 203
+I C + YP G T V+ D +TF F SKC M+R PRK+ WT +R
Sbjct: 2 RIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKV----DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
C +S + ++PGHG+ V TF KC A ++ ++NPR + WT YRR +K
Sbjct: 6 CEFSHFAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRK 65
Query: 219 GQEEEQAKKR 248
+ ++R
Sbjct: 66 TTTDRVNRRR 75
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 39 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
+I C + IYPGHG V+ D F F S+C ++NPRK+ +T RR
Sbjct: 2 RIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARR 57
>UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5;
Archaea|Rep: 50S ribosomal protein L24e - Methanopyrus
kandleri
Length = 68
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYR 203
C + G I PG GK VK DG F +SKCE L + R+P+KV WT +R
Sbjct: 7 CDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHR 58
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
C + G + PG GK +K DG T+ +SKC + + R PR+ WT + + KK
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRRKFKKGQE 227
C+Y G I PG+G V+VDG F + +C + + M +NP+K W RR Q
Sbjct: 6 CSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIRRAKSAAQS 65
Query: 228 EEQAK 242
+ +K
Sbjct: 66 KSSSK 70
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 206
C++ G++I PG G V+ DG F +SKC + L R+P+K WT Y +
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPKKYKWTTRYMK 59
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 48 LCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 227
+C + G IYPGHG V F F ++KC+ + + + + WT+ + + K +
Sbjct: 3 ICNFCGIGIYPGHGSMFVTNKFDKFYFCSTKCKKLKKIGKTNKGLKWTIKFSKLNKFNEI 62
Query: 228 EEQAKK 245
Q KK
Sbjct: 63 SNQIKK 68
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 41.9 bits (94), Expect = 0.009
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 230
C Y G I PG G V DG T F +SKCE + R R + WT R + + ++E
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAEDE 66
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 120 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 203
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L24E - Candidatus Nitrosopumilus maritimus SCM1
Length = 66
Score = 37.1 bits (82), Expect = 0.26
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 200
C + + G G + K DG F ++KC+ L ++R+PRK WT Y
Sbjct: 8 CNFCNRPVAKGSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKY 58
>UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L24e -
Thermoplasma acidophilum
Length = 67
Score = 37.1 bits (82), Expect = 0.26
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 200
C++ G I PG G V+ DG F ++KC + + R PR V WT Y
Sbjct: 7 CSFCGKAIEPGTGIMYVRKDGAILYFCSNKCRKNMIELNRVPRYVKWTNEY 57
>UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24E - Cenarchaeum
symbiosum
Length = 65
Score = 35.9 bits (79), Expect = 0.59
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEA-AHLMRRNPRKVTWTVLY 200
C + + G G K DG F +SKC +++R+PRK WT Y
Sbjct: 8 CNFCNRPVAKGSGTMFAKNDGTVMWFCSSKCRKNMTVLKRDPRKFKWTGKY 58
>UniRef50_A4YCQ3 Cluster: Ribosomal protein L24E; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
L24E - Metallosphaera sedula DSM 5348
Length = 61
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 206
C++ G I P G V+ DG F ++KC L ++ +K+ WT Y R
Sbjct: 7 CSFCGGDIPPATGMMHVRNDGTILWFCSNKCRKYMLKYHKDAKKLKWTTSYSR 59
>UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:
DENND1B protein - Homo sapiens (Human)
Length = 166
Score = 32.3 bits (70), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 197 QDSPCYFTRIPPHQMGGFTF*IQECEGFSI 108
+DSP Y RIPP ++ F F I++ E F +
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPV 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,766,802
Number of Sequences: 1657284
Number of extensions: 6411759
Number of successful extensions: 15754
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 15410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15737
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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