Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0469
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.9  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   6.5  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    23   8.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   8.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 253 LVRFFACSSSWPFLNL 206
           L+R F  + SWP LNL
Sbjct: 903 LLRVFKLAKSWPTLNL 918


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 27  VRSNKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 146
           VR+N  G C Y    + PG  K+  K+D   F F + +CE
Sbjct: 113 VRNN--GSCLY----VPPGIFKSTCKIDITWFPFDDQRCE 146


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 27  VRSNKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 146
           VR+N  G C Y    + PG  K+  K+D   F F + +CE
Sbjct: 145 VRNN--GSCLY----VPPGIFKSTCKIDITWFPFDDQRCE 178


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 201 RRKFKKGQEEEQAKKRTR 254
           +R+ K G+E+  +KKRT+
Sbjct: 53  KRELKAGEEDVLSKKRTK 70


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 307 HNVTK*STNNRTLELLGPLVRFFACSSSWPFLNLRLYRTVHVTLRGFLL 161
           H V    T+N T    GPL     C   WP   +R   ++  ++  F+L
Sbjct: 235 HGVALNGTDNAT----GPLSSAMYCEELWPSEEMRKTFSIVTSILQFVL 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,691
Number of Sequences: 2352
Number of extensions: 6602
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)