Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0469
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...   135   4e-32
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...   135   4e-32
AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p pro...    60   1e-09
AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA...    60   1e-09
AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    60   2e-09
BT010025-1|AAQ22494.1|  594|Drosophila melanogaster RE05480p pro...    28   7.0  
AE014134-1323|AAF52546.3|  596|Drosophila melanogaster CG13795-P...    28   7.0  

>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score =  135 bits (326), Expect = 4e-32
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = +3

Query: 39  KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
           KIGLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +K
Sbjct: 2   KIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRK 61

Query: 219 GQEEEQAKKRTR 254
           G EEE +KKRTR
Sbjct: 62  GIEEEASKKRTR 73



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +2

Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
           +KG     SK+   RTQKFQRAIVGASL++I+AKRNMKPEVR
Sbjct: 60  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVR 101


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score =  135 bits (326), Expect = 4e-32
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = +3

Query: 39  KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 218
           KIGLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +K
Sbjct: 2   KIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRK 61

Query: 219 GQEEEQAKKRTR 254
           G EEE +KKRTR
Sbjct: 62  GIEEEASKKRTR 73



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +2

Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
           +KG     SK+   RTQKFQRAIVGASL++I+AKRNMKPEVR
Sbjct: 60  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVR 101


>AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p
           protein.
          Length = 191

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 26/56 (46%), Positives = 32/56 (57%)
 Frame = +3

Query: 39  KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
           +I  C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 2   RIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA
           protein.
          Length = 191

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 26/56 (46%), Positives = 32/56 (57%)
 Frame = +3

Query: 39  KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 206
           +I  C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 2   RIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 159 MRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTR 254
           M+RNPRKVTWTVLYRRK +KG EEE +KKRTR
Sbjct: 1   MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTR 32



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +2

Query: 212 QKGPRGRTSKETY*RTQKFQRAIVGASLSDIMAKRNMKPEVR 337
           +KG     SK+   RTQKFQRAIVGASL++I+AKRNMKPEVR
Sbjct: 19  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVR 60


>BT010025-1|AAQ22494.1|  594|Drosophila melanogaster RE05480p
           protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 189 SMLLYEDSSSSNGRLHILNSGM*RFFHPL*PWSCHGL 79
           SML+Y    ++   L I+NS     F P  PWSC GL
Sbjct: 110 SMLIYYSIFAAVPLLFIINS-----FRPTLPWSCEGL 141


>AE014134-1323|AAF52546.3|  596|Drosophila melanogaster CG13795-PA
           protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 189 SMLLYEDSSSSNGRLHILNSGM*RFFHPL*PWSCHGL 79
           SML+Y    ++   L I+NS     F P  PWSC GL
Sbjct: 110 SMLIYYSIFAAVPLLFIINS-----FRPTLPWSCEGL 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,309,487
Number of Sequences: 53049
Number of extensions: 305372
Number of successful extensions: 698
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)