Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0465
(744 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 161 1e-38
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 149 9e-35
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 136 4e-31
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 133 5e-30
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 125 1e-27
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 119 7e-26
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 108 2e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 99 6e-20
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 94 3e-18
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 88 2e-16
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 84 4e-15
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 80 7e-14
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 78 3e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 75 1e-12
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 73 7e-12
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 73 1e-11
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 70 5e-11
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 70 7e-11
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 69 2e-10
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 69 2e-10
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 68 3e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 67 5e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 67 5e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 66 6e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 64 3e-09
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 64 3e-09
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 64 5e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 63 6e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 6e-08
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 60 7e-08
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 57 5e-07
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 56 9e-07
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 56 1e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 54 5e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 53 6e-06
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 53 9e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 9e-06
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 52 1e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 52 1e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 51 3e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 51 3e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 51 3e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 48 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 47 4e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 46 0.001
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 46 0.001
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.004
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.005
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 43 0.009
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 42 0.012
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.021
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 41 0.028
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.028
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.037
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 40 0.085
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 39 0.11
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 39 0.11
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 38 0.20
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 38 0.26
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.34
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 37 0.46
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.60
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.60
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 36 0.80
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 36 1.1
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.1
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.1
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 35 1.8
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.4
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.4
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 4.2
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 33 5.6
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.8
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 33 9.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 161 bits (392), Expect = 1e-38
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
IDFFLG SL DEVLKIMPV KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRG
Sbjct: 94 IDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRG 153
Query: 437 AIILAKLSVLPVRRGYWGNKIGK 505
AIILAKLS++PVRRGYWGNKIGK
Sbjct: 154 AIILAKLSIVPVRRGYWGNKIGK 176
Score = 105 bits (251), Expect = 2e-21
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
K +TVPCKVTG+CGSV VRLIPAPRGTGIVSAP PKKLL MAG+ DCYTSARG T T
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 232
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
K + K W+PVTKLGRLV++ KI L IYLFSLPIKE
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKE 90
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 149 bits (360), Expect = 9e-35
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
IDFFLG SL DEVLKIMPV KQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRG
Sbjct: 34 IDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRG 93
Query: 437 AIILAKLSVLPVRRGYWGNKIGK 505
AIILAKLS++PV RGYWGNKIGK
Sbjct: 94 AIILAKLSIVPVCRGYWGNKIGK 116
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 159 VPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
+PVTKLG L+ + KI L IYLFSLPIKE
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKE 30
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAP 573
K +TVPCKVTG+C SV V LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 136 bits (330), Expect = 4e-31
Identities = 59/82 (71%), Positives = 74/82 (90%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
+D+FL LNDEV+K++PV KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRG
Sbjct: 68 VDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRG 126
Query: 437 AIILAKLSVLPVRRGYWGNKIG 502
AII+ KLS++P+RRGYWG +G
Sbjct: 127 AIIMGKLSIMPIRRGYWGTALG 148
Score = 91.1 bits (216), Expect = 3e-17
Identities = 38/55 (69%), Positives = 48/55 (87%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
+TVP KV+GKCGSVTVRL+PAPRG G+V+AP K+ LQ+AG++DCYT +RGST T
Sbjct: 151 HTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKT 205
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEF 251
+++ K WVPVTKLGRLV+ GKI + IYL+SLPIKE+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEY 65
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 133 bits (321), Expect = 5e-30
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
DEVLKIMPV KQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 467 PVRRGYWGNKIGK 505
P+R+GYWGNKIGK
Sbjct: 108 PLRQGYWGNKIGK 120
Score = 97.1 bits (231), Expect = 4e-19
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
K NTVPCKVTG CGSV V LIPAPRGTG+VSAP PKKLL MAG+ DCYTSAR T +
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTAS 176
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 125 bits (301), Expect = 1e-27
Identities = 55/83 (66%), Positives = 70/83 (84%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
++ F+G L DEV+KI PV KQT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G
Sbjct: 84 VEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQG 143
Query: 437 AIILAKLSVLPVRRGYWGNKIGK 505
++ILAKL+++PVRRGYWG+K+G+
Sbjct: 144 SMILAKLNIVPVRRGYWGSKLGE 166
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
+T+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T T
Sbjct: 168 HTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRT 222
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 141 EDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
+D WVP TKLGRLV++GKI L I+LFSLPIKE
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKE 80
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 119 bits (287), Expect = 7e-26
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 242 QRIRXIDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ + ID L L DEV+ I PV KQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 422 TAIRGAIILAKLSVLPVRRGYWGNKIGK 505
AIR II+AKLSV+P+RRGYWG +G+
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLGQ 150
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEILL 687
+++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T T E L
Sbjct: 152 HSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTL 211
Query: 688 K 690
K
Sbjct: 212 K 212
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 144 DXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEF 251
+ K WVPVTKLGRLV+ GKI + I+L SLP+KEF
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEF 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 108 bits (259), Expect = 2e-22
Identities = 52/81 (64%), Positives = 59/81 (72%)
Frame = +1
Query: 472 PKRLLG*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTS 651
P+ G + RK +TVP KVTG+CGSV VRLIPAPRGTG VSAP PKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 652 ARGSTGTWEILLKPHTLPLPR 714
ARG T TW L + + PR
Sbjct: 166 ARGHTATWGTLPRLLLMRSPR 186
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +2
Query: 338 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 505
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I K
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRK 116
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 99 bits (238), Expect = 6e-20
Identities = 46/83 (55%), Positives = 56/83 (67%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
+D G S+ +EVL I V KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRG
Sbjct: 55 VDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRG 114
Query: 437 AIILAKLSVLPVRRGYWGNKIGK 505
AI AK ++ PVR G W GK
Sbjct: 115 AIARAKCAIRPVRLGLWDGAQGK 137
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEI 681
K +TV CK +GKCG+ V++IPAPRGTGI+S KK+ ++AG++D YT + G+T T E
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 682 LLK 690
K
Sbjct: 197 FAK 199
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
+++ W+P T +GRLV+ KI L I+ FS I+E
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIRE 51
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 94.3 bits (224), Expect = 3e-18
Identities = 44/60 (73%), Positives = 46/60 (76%)
Frame = +1
Query: 493 QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
Q R KVTG+CGSV VRLIPAPRGTGIVSAP PKKLL MAG+ DCYTSARG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFK 352
IDFFLG SL DEVLKIMPV KQTRAGQRTRFK
Sbjct: 94 IDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
K + K W+PVTKLGRLV++ KI L IYLFSLPIKE
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKE 90
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGL 394
IDFFLG SL DEVLKIMPV KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 69 IDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
K + K W+PVTKLGRLV++ KI L IYLFSLPIKE
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKE 65
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = +1
Query: 469 SPKRLLG*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYT 648
S ++ LG + K + V CKVTG CGSV V LIPA RGTGI SAP P K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 649 SARGSTGT 672
SARG T +
Sbjct: 61 SARGCTAS 68
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 79.8 bits (188), Expect = 7e-14
Identities = 40/60 (66%), Positives = 42/60 (70%)
Frame = +1
Query: 493 QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
Q R KVTG+CGSV VRL APRGTGIVSAP PKKLL MA + DCYT ARG T T
Sbjct: 115 QTRAGQWTRFKVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTAT 173
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFK 352
IDFFLG SL +EVLK MPV KQTRAGQ TRFK
Sbjct: 94 IDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIK 245
K + K W+P TKLG LV++ KI L IYLFSLPIK
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIG 391
IDFFLG SL DEVLKIMPV K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 22 IDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 39.9 bits (89), Expect = 0.065
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Frame = +3
Query: 198 KIDKLXSIYLFSLPIKEFXSL---ISSSXRP*MMRFL--RSCLYXNKHVPDSAHVS-RHL 359
KI L IYLFSLPIKE + + +S + +++ + R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 360 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCQFYQSEEVTGVTR*ESXHRPLQGHRQV 539
A +L R+ P +L C ++++ + G ++ HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 540 WFRNSXADSCXSWYWYCVCXXS*EASSDGWCTGLLHVSSWFNWHLG 677
+W+ + + EA+ D W LLH+S + H G
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPG 161
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +1
Query: 487 G*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARG 660
G + K +TV CKVTG GSV++ LIPAPR T I SAP PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 68.9 bits (161), Expect = 1e-10
Identities = 42/83 (50%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
ID FLG +L DEVLK +P K TR GQ +KA GD NGH+ G+ EVA I+
Sbjct: 82 IDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTIQR 132
Query: 437 AIILAKLSVLPVRRGYWGNKIGK 505
IIL KL ++PV RGY G+K K
Sbjct: 133 VIILTKLPIVPVWRGYCGSKTSK 155
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 162 PVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
P +KLG LV++ +I L IYLFSLPIKE
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKE 78
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 514 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
VPC+VTG+CGS+ V LIPAPRGTG VSAP P KLL MAG+ D +SA G T T
Sbjct: 156 VPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTAT 206
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +2
Query: 308 PVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 487
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 488 GNKI 499
G ++
Sbjct: 148 GKRL 151
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLXSIYLFSLPIKEFXSLISSSXRP 281
W+P+TKLG LV+E KI L IY FSL + SL S P
Sbjct: 54 WLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/93 (36%), Positives = 59/93 (63%)
Frame = +2
Query: 227 VFFTNQRIRXIDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 406
+FF N ++ ++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKL--VNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 407 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 505
S + I+ A+ AKL++ +RRGYW + GK
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGK 182
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +1
Query: 493 QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGST 666
++ K NT+ K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/54 (62%), Positives = 39/54 (72%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
TV CKVTG+C SV + LIP R I+SAP PKKLL +A + DCYTSARG T T
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTAT 213
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/64 (50%), Positives = 38/64 (59%)
Frame = +2
Query: 239 NQRIRXIDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 418
N++ I FFL SL DE IMPV QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 419 ATAI 430
ATAI
Sbjct: 143 ATAI 146
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = -3
Query: 496 LVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLF 317
LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 316 XYRHDLKNLIIQGRXEEEIN 257
HDL++ ++Q +EEI+
Sbjct: 89 LDGHDLQHFVLQRAAQEEID 108
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +1
Query: 565 PAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
PAPRGTGIVSAP PKKLL MAG+ DCYTSARG T T
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 36
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/59 (54%), Positives = 47/59 (79%)
Frame = +1
Query: 496 DRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
D+K ++VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPT 219
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L EV+ + + K T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+
Sbjct: 87 LKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLN 146
Query: 461 VLPVRRG 481
V P++ G
Sbjct: 147 VNPIKMG 153
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = -3
Query: 505 LSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGT 326
L+ + TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ +
Sbjct: 107 LTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSS 166
Query: 325 CLFXYRHDLKNLIIQ 281
L R D+ N I+Q
Sbjct: 167 GLLLDRLDVHNFILQ 181
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 66.9 bits (156), Expect = 5e-10
Identities = 39/82 (47%), Positives = 50/82 (60%)
Frame = +2
Query: 260 DFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
D L ++ + ++I K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 440 IILAKLSVLPVRRGYWGNKIGK 505
IIL + S+ G+ GNKI K
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAK 76
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEI 681
K +TV C+VT SV V I APRGT I+SAP PKKLL+MA + D + ARG T +
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN 135
Query: 682 LLK 690
++K
Sbjct: 136 VIK 138
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+D FL +L +E L I PV KQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 98 VDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 58.0 bits (134), Expect = 2e-07
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLXSIYLFSLPIKEF----XSLISSSXRP*MMRFLRSCLYXNK 323
WVP+TKLGRLV+ GKI L +I+ FS+PIKE+ L + P + ++ +
Sbjct: 64 WVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTCAGQ 123
Query: 324 HVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSC--QFYQSEE-VTGVT 494
A+V ++ + + L W +A++ + L +L C QF S++ + G
Sbjct: 124 KTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQTQFDSSQKRILGKQ 178
Query: 495 R*ESXHRPLQGHRQVWFRNSXADSCXSWYWYCVCXXS*EASSDGWCTGLLH 647
+ H P+Q R+ S S YWY E ++GW LLH
Sbjct: 179 DRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/59 (50%), Positives = 46/59 (77%)
Frame = +1
Query: 496 DRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
D+K ++VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L EV+ + + K T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+
Sbjct: 68 LKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLN 127
Query: 461 VLPVRRG 481
V P++ G
Sbjct: 128 VGPIKLG 134
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/64 (54%), Positives = 39/64 (60%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEI 681
++ V KVT GSV V LIPAPRGTGIVSAP K L AG+ +CY SAR T T
Sbjct: 55 RSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYN 114
Query: 682 LLKP 693
KP
Sbjct: 115 FSKP 118
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2
Query: 317 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
KQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 2 KQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 284 NDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 463
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 464 LPVRRG 481
+ ++RG
Sbjct: 122 IEIKRG 127
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1
Query: 499 RKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
R+ ++VP V GK GSV VRLIP PRG G+V KK+L++AGVQD ++ G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++VL + V + ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS
Sbjct: 57 LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLS 116
Query: 461 VLPVRRGYWGNKIGKXTP 514
++ VR G + G +P
Sbjct: 117 LIKVRVGCGSWECGCGSP 134
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
+++P G CGSV V L+PAPRG G+V+ K +L +AGV+D +T G T T
Sbjct: 135 HSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRT 189
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +2
Query: 242 QRIRXIDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ + +D L L+D+VL + + + T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 422 TAIRGAIILAKLSVLPVRRG 481
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
+VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRT 165
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 63.3 bits (147), Expect = 6e-09
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 260 DFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ +
Sbjct: 27 DFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLS 84
Query: 440 IILAKL-SVLPVRRGYWGNKIGKXTPSLARSPASV 541
+ L S LP R Y GN I K T R+ S+
Sbjct: 85 SWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 39.1 bits (87), Expect = 0.11
Identities = 30/72 (41%), Positives = 37/72 (51%)
Frame = +1
Query: 457 VSSTSPKRLLG*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQ 636
+SS P+ G RK T PCK TG S++ L P IVS P+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 637 DCYTSARGSTGT 672
CYTSAR T T
Sbjct: 145 SCYTSARSYTVT 156
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +2
Query: 260 DFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
DF LG L D+VLK+M V KQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 156 DFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRT 215
Query: 440 IILAKLSV 463
+L+ + V
Sbjct: 216 NVLSIILV 223
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWE 678
+++P KV GK GSV V L+PAP+GTG+V K LL AG++D +++ +G T T E
Sbjct: 132 HSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTE 188
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L EV+ I V KQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++
Sbjct: 54 LKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMN 113
Query: 461 VLPVRRG 481
++PVRRG
Sbjct: 114 IIPVRRG 120
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
W P T +G LV+EGKI + ++ +LPI E
Sbjct: 13 WKPRTSIGSLVKEGKISSIKELFDRNLPITE 43
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEILL 687
N++ K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T L
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLA 236
Query: 688 K 690
K
Sbjct: 237 K 237
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L DEVL I V + T +G+R +F+ VA+G+ +G++G +V AI+ AI +AKL+
Sbjct: 99 LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLN 158
Query: 461 VLPVRR--GYWGNKIGKXTPSLAR 526
++ V R G W ++ G T SL R
Sbjct: 159 IIEVDRGSGSWEDQPG-GTNSLTR 181
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/72 (36%), Positives = 44/72 (61%)
Frame = +2
Query: 266 FLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 445
+L L DEV+ I + T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 446 LAKLSVLPVRRG 481
AKL+++ ++RG
Sbjct: 101 NAKLNIIEIKRG 112
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
K +T+P V GK GSV+V L PAP+G G+ K +L+MAG+ D + A G T T
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKT 178
Score = 33.1 bits (72), Expect = 7.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLXSIYLFSLPIKEF 251
W P T+LGRLV G+I + LP+KE+
Sbjct: 5 WTPRTELGRLVANGEIKTISEALHSKLPLKEY 36
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
+ +TV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRT 180
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L DEVL I V + T +G+R +F+ VA+G+ +G IG +V AI+ AI +AKL+
Sbjct: 48 LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLN 107
Query: 461 VLPVRRG 481
++ V RG
Sbjct: 108 IIDVSRG 114
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 272 GXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 451
G ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 452 KLSVL--PVRRGY 484
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 138 KEDXKXWVPVTKLGRLVREGKIDKLXSIYLFSLPIK 245
K + K W+PVTKLGRLV++ KI L IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = -2
Query: 686 SKISQVPVEPRADV*QSCTPAI*RSFLGXGADTIPVPRGAGISRTVTEPHLPVTLQGTVX 507
+K +V V+P A V QS P+ FLG A+ +PVP GAG+ T TEP P+TL G
Sbjct: 11 AKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCGLCG 70
Query: 506 A 504
A
Sbjct: 71 A 71
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 461 VLPV 472
++ V
Sbjct: 72 LISV 75
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGT 672
+++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T
Sbjct: 139 HSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKT 193
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2
Query: 317 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 481
K+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 73 KKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 34.3 bits (75), Expect = 3.2
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLXSIYLFSLPIKE 248
W P TKLGRLV+EGKI + I I+E
Sbjct: 7 WQPKTKLGRLVKEGKITNIDEILSNKYVIRE 37
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/82 (43%), Positives = 43/82 (52%)
Frame = +2
Query: 257 IDFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 436
I+FFLG L DEVL+ M QRTR K F + + L V CSKEV TA +
Sbjct: 53 IEFFLGEHLKDEVLRTM-----LAQNQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQR 106
Query: 437 AIILAKLSVLPVRRGYWGNKIG 502
AI L + + GY GNKIG
Sbjct: 107 AITLLSF-LFSTQTGYKGNKIG 127
Score = 40.7 bits (91), Expect = 0.037
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 508 NTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGV 633
+T+PC VT + V V L APRGTG VSA PKKL +A +
Sbjct: 130 HTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +2
Query: 260 DFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
DF L L D+VLK+M V KQ AG+ RFK V I N ++ LGV+ KE+ A+
Sbjct: 22 DFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRT 81
Query: 440 IIL 448
IIL
Sbjct: 82 IIL 84
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +2
Query: 260 DFFLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 440 IILAKLSVLPV 472
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 36.7 bits (81), Expect = 0.60
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 505 ANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQD 639
A T+P +V K + ++PA GTG+++ + +L++AGVQ+
Sbjct: 581 AGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQN 625
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 278 SLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 458 SVLPVRR 478
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEI 681
K ++ V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+ +
Sbjct: 116 KKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPMNV 175
Query: 682 L 684
+
Sbjct: 176 I 176
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
K NT+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 467 PV 472
+
Sbjct: 71 KI 72
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +2
Query: 167 HQTRPSCSRRKNRQTRXHLLVFFT--NQRIRXIDFFLGXSLNDEVLKIMPVXKQTRAGQR 340
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 341 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 472
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
Score = 40.7 bits (91), Expect = 0.037
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARG 660
+ TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 109 RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 461 VLPVR 475
+ V+
Sbjct: 138 MYKVK 142
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 523 KVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARG 660
+V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G
Sbjct: 152 EVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLG 197
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 15 LEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQ 74
Query: 461 VLPV 472
++ +
Sbjct: 75 LVRI 78
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APXPKKLLQMAGVQDCYTSARGS 663
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 467 PV 472
V
Sbjct: 77 EV 78
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEILL 687
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST + L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPLNLAL 142
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 467 --PVRRG 481
PV G
Sbjct: 79 TVPVENG 85
Score = 37.5 bits (83), Expect = 0.34
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
T+P ++ G+ + V L PA GTG+++ P+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 467 PV 472
V
Sbjct: 209 QV 210
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
K +T P + G G+ V L PA GTG+++ + +L+MAGV++ GS
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGS 267
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLXSIYLFSLPIKEF 251
W PVTKLGRLV++GK+ + I+ F + IKEF
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEF 66
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEI 681
K +T+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+ I
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSSNPVNI 155
Query: 682 L 684
+
Sbjct: 156 V 156
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 284 NDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 463
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 464 LPV 472
+ +
Sbjct: 91 VKI 93
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 32.7 bits (71), Expect = 9.8
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +1
Query: 475 KRLLG*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSA 654
K L+ K+ ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 655 RGS 663
GS
Sbjct: 144 LGS 146
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 467 PV 472
V
Sbjct: 246 TV 247
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQD 639
T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 272 GXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 451
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 452 KLSVL--PVRRG 481
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 499 RKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWE 678
R+ T+ G+ G+ V L AP GTGI++ + + + GV D T + G++ +
Sbjct: 125 REGRTLHHDGRGRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLGVADVVTKSVGTSNPYN 184
Query: 679 IL 684
++
Sbjct: 185 MI 186
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 272 GXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 451
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 452 KLSVLPVRR 478
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 499 RKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
R T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 110 RVRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 460
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 461 VLPVRRG 481
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGST 666
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 461 VLPV 472
V+ V
Sbjct: 88 VIRV 91
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 467 PV 472
V
Sbjct: 128 RV 129
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +1
Query: 463 STSPKRLLG*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDC 642
S + K L+ K N++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNV 179
Query: 643 YTSARGS 663
+ GS
Sbjct: 180 LAKSLGS 186
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGL 394
L +EV+ I V KQT G+ R KA VAIGD+NGH L
Sbjct: 75 LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 40.3 bits (90), Expect = 0.049
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 162 PVTKLGRLVREGKIDKLXSIYLFSLPIKEF 251
PVTKLGRLV++GK+ + I+ F + IKE+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEY 65
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 467 PV 472
V
Sbjct: 104 RV 105
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGS 161
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.5 bits (93), Expect = 0.021
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 523 KVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARG 660
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 577 GTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEILLK 690
G+ +V+ PKK+L+ AG++D +TS+RGST T +K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 454
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 36.3 bits (80), Expect = 0.80
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 40.7 bits (91), Expect = 0.037
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 467 PV 472
V
Sbjct: 79 EV 80
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
K+N++ G G V + PA GTG+++ + +L++AGV++ GS
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGS 137
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 39.5 bits (88), Expect = 0.085
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
+TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 158 STVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 36.7 bits (81), Expect = 0.60
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 287 DEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 467 PV 472
V
Sbjct: 151 RV 152
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGST 666
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 284 NDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 38.3 bits (85), Expect = 0.20
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 499 RKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGST 666
R+ T+ K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 77 REGRTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 37.9 bits (84), Expect = 0.26
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3
Query: 250 NSLIGKENK*MLSSLSIFPSRTRRPSLVTGTH 155
NSL GKE K + S + I P+ T PSLVTGTH
Sbjct: 18 NSLTGKECKKISSMVVILPALTNLPSLVTGTH 49
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.5 bits (83), Expect = 0.34
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 442 NSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFXYRHDLKN 293
NS ++ +FL T+TNMT+ V+N NKC ET S F D N
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCETETTSTFNYFSNTVDCNN 74
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGS 663
K +T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.34
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 461 VLPVRR 478
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.1 bits (82), Expect = 0.46
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 311 VXKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 478
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.60
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 461 VLPV 472
++ V
Sbjct: 81 MVRV 84
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWEIL 684
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST + I+
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPYNIV 147
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 36.7 bits (81), Expect = 0.60
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 281 LNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 475 KRLLG*QDRKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSA 654
K L+ + + +++P +V + L PA GTGIV+ + +L+MAGV++ +
Sbjct: 71 KNLITIESLEGDSIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKS 130
Query: 655 RGS 663
GS
Sbjct: 131 LGS 133
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 36.3 bits (80), Expect = 0.80
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 499 RKANTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGSTGTWE 678
R+ T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 77 REGRTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTSNPHN 136
Query: 679 ILLKPHTLPLPRHMPTH 729
++ ++ P H
Sbjct: 137 MIRATMKALSKQNSPKH 153
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 350 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG--KXTPSLA 523
++ V IG + H G + +++VA A+RG + L V GYW + G + ++A
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTVA 61
Query: 524 RSPASVVP 547
S +VVP
Sbjct: 62 YSDVTVVP 69
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 311 VXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 478
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 293 VLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 472
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 35.1 bits (77), Expect = 1.8
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 266 FLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 445
F G SL D+++ + + + QRT+ GH GL CS EVATAI+ I
Sbjct: 71 FPGESLKDDLMMASGLGSRLLSSQRTK-----------GHSGLSSMCSGEVATAIQVLGI 119
Query: 446 LAKL-SVLPVRRGYWGNKIGKXTPSL 520
+ L S P+ R GN GK PS+
Sbjct: 120 TSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 278 SLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 458 SVLPVRR 478
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 269 LGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 448
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 449 AKLSVL 466
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 FLGXSLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 430
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 278 SLNDEVLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 458 SVLPVRR 478
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 511 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXPKKLLQMAGVQDCYTSARGST 666
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 32.7 bits (71), Expect = 9.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 632 TPAI*RSFLGXGADTIPVPRGAGISRTVTEPHLPVTLQGTVXAFL 498
TP + RS G GA T+P RG+G+ T T P G + A++
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAPMDRQKAHGVLTAWM 186
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 32.7 bits (71), Expect = 9.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 293 VLKIMPVXKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 32.7 bits (71), Expect = 9.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -1
Query: 213 RVCRFFLREQDGRVW*QEPTXXGLPCRAHDHGRDXDRVHEDRHGLYL 73
RV R++L + +W E DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,696,355
Number of Sequences: 1657284
Number of extensions: 12418033
Number of successful extensions: 31997
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 30597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31970
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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