Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0463
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006671-6|AAF39916.1|  411|Caenorhabditis elegans Hypothetical ...    31   0.62 
AL117203-12|CAB60423.1|  487|Caenorhabditis elegans Hypothetical...    31   0.82 
U21318-3|AAC46667.1|  175|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81583-7|CAB04668.1|  268|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z78543-2|CAB01752.1|  369|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81540-1|CAB04402.1|  186|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z22179-14|CAI06052.1|  443|Caenorhabditis elegans Hypothetical p...    28   5.8  
AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical...    28   5.8  
Z49911-9|CAA90133.1|  682|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF022981-6|AAY86319.1|  202|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AC006671-6|AAF39916.1|  411|Caenorhabditis elegans Hypothetical
           protein K08A2.1 protein.
          Length = 411

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 578 VPSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAASDPVI 709
           VP+ P +++ + A   PSP A   PPPRL          ++PV+
Sbjct: 262 VPTAPDVTSESPATPQPSPPAVTPPPPRLLPAATTESHQTEPVL 305


>AL117203-12|CAB60423.1|  487|Caenorhabditis elegans Hypothetical
           protein Y48C3A.20 protein.
          Length = 487

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 22/97 (22%), Positives = 43/97 (44%)
 Frame = +3

Query: 48  LLRAYRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLL 227
           L+   RP     L  VP K+R +    + + ++ G+  T   + + ++  +  + NF+ L
Sbjct: 83  LVSRLRPDFNGTLASVPYKVRNIDGYLKKLGSYSGKRPTLSSDLQLMITFEQEESNFSDL 142

Query: 228 IQLQNGKPKLLFWKIRAEYHRIERKWTGYSKRSFQRI 338
             LQN  P       R  Y+  +   +  SK+  Q++
Sbjct: 143 QFLQNQFPNDFRVGKRGRYNNNQEAPSSVSKQQLQQV 179


>U21318-3|AAC46667.1|  175|Caenorhabditis elegans Hypothetical
           protein K03H9.1 protein.
          Length = 175

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/104 (19%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
 Frame = +2

Query: 218 HAANPTSKRKAQALILEDKSGVSSN*KKMDRLF*TELPKDSRSSKRMCSLSVNQATESVL 397
           H  N  ++ K   + ++ +SG+    K   +L   ++P+D    K + S+S  +A  S++
Sbjct: 50  HDYNELNREKIP-ISVDGRSGLLETFKDKSKLPVEKVPEDVLWEKALDSMSYEEARSSIV 108

Query: 398 AHCTVSWSSAHLNLRCATLKLTAST---WVNFAVFSETVTRALR 520
                + +S+ L++R   L+ ++ +   W+  A+ ++ +   ++
Sbjct: 109 QALRENSNSSLLHIRACKLEKSSESQYEWIKLALLNDKLDNRMQ 152


>Z81583-7|CAB04668.1|  268|Caenorhabditis elegans Hypothetical
           protein T02G6.7 protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +3

Query: 78  NPLDEVPSKLRAVVVNG---QHIFTFDGRHLTFPGNCRYV 188
           +PLD  P K+ + ++N    ++  TFDG    F  NCR++
Sbjct: 77  DPLDLFPMKMESPLINFLDFKYNITFDGEIWNFKYNCRFI 116


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 26/87 (29%), Positives = 40/87 (45%)
 Frame = +1

Query: 1   ASSNSCTPVISLTSWPFSEPTDLVASTH*MKCRLSSALLL*TVNTSSRSTVATSPSQETV 180
           ++S   T + + TS P +  T    ST       +S     T   SS ST+ +SPS  T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357

Query: 181 ATYWRTTTSIETSRC*SNFKTESPSSY 261
           +T   TTT+ E +   S+    +  SY
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSY 384


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 26/87 (29%), Positives = 40/87 (45%)
 Frame = +1

Query: 1   ASSNSCTPVISLTSWPFSEPTDLVASTH*MKCRLSSALLL*TVNTSSRSTVATSPSQETV 180
           ++S   T + + TS P +  T    ST       +S     T   SS ST+ +SPS  T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357

Query: 181 ATYWRTTTSIETSRC*SNFKTESPSSY 261
           +T   TTT+ E +   S+    +  SY
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSY 384


>Z78543-2|CAB01752.1|  369|Caenorhabditis elegans Hypothetical
           protein F29G6.2 protein.
          Length = 369

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +1

Query: 346 IEKDVFAFRQPSNRIGVGSLYGLM--VFCTSKLEVCYIEANGFYLGKLRGLLGDGNTSLT 519
           ++KD   FRQ   +  V  + G +   F T   EV  +EA+     K +GL  D  + L 
Sbjct: 114 LKKDCKTFRQTIAQFEVEKMGGPVRNSFSTENDEVSKLEAHEKLQAKCKGLESDLRSMLG 173

Query: 520 MTSGYLMERSALRK 561
           +    LMER  +++
Sbjct: 174 IKEELLMERDEMQR 187


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/69 (24%), Positives = 28/69 (40%)
 Frame = +3

Query: 60   YRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQ 239
            Y  R  N   +  +     +    H+ T+DG   T PG   YVL       +  L++Q++
Sbjct: 837  YWRRMTNGCQDYRAPAAGYIYGEPHVITYDGIRYTMPGKGYYVLTMSDSPYH-KLMVQVR 895

Query: 240  NGKPKLLFW 266
              +P    W
Sbjct: 896  LEQPDDTLW 904


>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 454 EANGFYLGKLRGLLGDGNTSLTMTSGYLMERSALRKASSVTRT 582
           EANG   GK RG  G G TSLT+T      +S +   S+  R+
Sbjct: 821 EANGGTTGK-RGNSGSGTTSLTVTGKQSNNQSGIAPQSNEKRS 862


>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 454 EANGFYLGKLRGLLGDGNTSLTMTSGYLMERSALRKASSVTRT 582
           EANG   GK RG  G G TSLT+T      +S +   S+  R+
Sbjct: 821 EANGGTTGK-RGNSGSGTTSLTVTGKQSNNQSGIAPQSNEKRS 862


>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
           protein Y51B11A.1 protein.
          Length = 1079

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +1

Query: 13  SCTPVISLTSWPFSEPTDLVASTH*MKCRLSSALLL*TVNTSSRSTVAT-SPSQETVATY 189
           S TP  S T  P  E T     T   +   SS   + T  T++  T +T +PS  T    
Sbjct: 63  SSTPTSSST--PIKETTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQ 120

Query: 190 WRTTTSIETSRC*SNFKTESPSS 258
             TTT+ ET+       TE PSS
Sbjct: 121 TTTTTAPETT------STEPPSS 137


>Z81540-1|CAB04402.1|  186|Caenorhabditis elegans Hypothetical
           protein F46B3.1 protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = +1

Query: 10  NSCTPVISLTSW---PFSEPTDLVASTH*MKCRLSSALLL*TVNTSSRSTVATSP 165
           N C P I +  W   P  +  +     H  KC LS  L    V T + +T  T+P
Sbjct: 86  NVCPPAICVDQWDNCPLYKLINQCTRYHKTKCPLSCGLCTGNVTTPATTTSTTTP 140


>Z22179-14|CAI06052.1|  443|Caenorhabditis elegans Hypothetical
           protein F58A4.14 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +3

Query: 153 RHLTFPGNCRYVLA-HDHVDRNFTLLIQLQNGKPKLLFWKIRAEYH 287
           R+    G C ++L  H       T   ++    PK+ +W  RA YH
Sbjct: 124 RYFYETGRCNFLLGRHQIAVEQLTKASEVMKDNPKVWYWLARAIYH 169


>AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical
           protein Y43F8C.16 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/84 (25%), Positives = 40/84 (47%)
 Frame = +1

Query: 7   SNSCTPVISLTSWPFSEPTDLVASTH*MKCRLSSALLL*TVNTSSRSTVATSPSQETVAT 186
           S + T   S+T+   S P+ + ++T       S+     + + +S  T +T+P+  + +T
Sbjct: 146 SATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPST 205

Query: 187 YWRTTTSIETSRC*SNFKTESPSS 258
              TTT+  TS   S    ES ++
Sbjct: 206 VQSTTTAEPTSTITSTTVPESSTT 229


>Z49911-9|CAA90133.1|  682|Caenorhabditis elegans Hypothetical
           protein M28.7 protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 140 HVRRSPPHLPRKLSLRIGARPRR*KLHAANPTSKRKA--QALILEDKSG 280
           HV+  P ++P K+S R+G R     +      S+R+A  QA  ++D  G
Sbjct: 272 HVKEKPKNVPSKVSSRLGVRDSVIGISTTTDPSRREANRQASRVDDCLG 320


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 103 SSALLL*TVNTSSRSTVATSPSQETVATYWRTTTSIETSRC*SNFKTESPSS 258
           S+  L+ T ++S+ +T  T+P   T  T   TTT+  TS   S   T  P++
Sbjct: 454 SATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTT 505


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +1

Query: 10  NSCTPVISLTSWPFSEPTDLVASTH*MKCRLSSALLL*TVNT--SSRSTVATSPSQETVA 183
           +S T V   T    +EP     ST   +   +++    T  T  +S ST++T+ +  T  
Sbjct: 250 SSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTP 309

Query: 184 TYWRTTTSIETS 219
           T   TTTS  TS
Sbjct: 310 TTTTTTTSTTTS 321


>AF022981-6|AAY86319.1|  202|Caenorhabditis elegans Hypothetical
           protein W03F9.11 protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 613 RPNTPITSCTMHPSPPPANRSSGEYRRFRP 702
           +P T  T+ T  P PPP  + S E+  FRP
Sbjct: 113 KPTTTTTTTTTPPPPPPP-KPSPEFLPFRP 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,249,637
Number of Sequences: 27780
Number of extensions: 378373
Number of successful extensions: 1441
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)