Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0463
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13670.1 68416.m01722 protein kinase family protein contains ... 31 0.76
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 30 1.3
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 29 4.0
At5g16560.1 68418.m01938 myb family transcription factor (KAN1) ... 29 4.0
At3g11800.1 68416.m01446 expressed protein 29 4.0
At1g79800.1 68414.m09316 plastocyanin-like domain-containing pro... 29 4.0
At1g70280.2 68414.m08086 NHL repeat-containing protein contains ... 29 4.0
At1g70280.1 68414.m08085 NHL repeat-containing protein contains ... 29 4.0
At1g27020.1 68414.m03294 expressed protein 29 4.0
At5g51760.1 68418.m06418 protein phosphatase 2C, putative / PP2C... 28 5.3
At4g09450.1 68417.m01555 myb family transcription factor contain... 28 5.3
At1g73700.1 68414.m08534 MATE efflux family protein similar to r... 28 5.3
At5g14520.1 68418.m01702 pescadillo-related similar to pescadill... 28 7.1
At5g02420.1 68418.m00165 expressed protein 28 7.1
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 28 7.1
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 28 7.1
At3g16730.1 68416.m02136 expressed protein ; expression supporte... 28 7.1
At2g24810.1 68415.m02968 pathogenesis-related thaumatin family p... 28 7.1
At5g59900.1 68418.m07512 pentatricopeptide (PPR) repeat-containi... 27 9.3
At3g44150.1 68416.m04733 expressed protein hypothetical proteins... 27 9.3
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 27 9.3
>At3g13670.1 68416.m01722 protein kinase family protein contains
Pfam domains, PF00069: Protein kinase domain
Length = 703
Score = 31.1 bits (67), Expect = 0.76
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +3
Query: 123 NGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQNGKPKLLFWKIRAEYHRIERK 302
+GQH+ +D R F G RY AH H+ R + L++ L+F HR
Sbjct: 302 SGQHV-EYDQRPDMFRGTVRYASAHAHLGRTASRRDDLESLAYTLIF------LHRGRLP 354
Query: 303 WTGY 314
W GY
Sbjct: 355 WQGY 358
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 516 YDDFRL-PNGKICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPACEQ 671
Y FR P+ K C S S F Y+ CP S H + D LPP EQ
Sbjct: 221 YSQFRSSPSPKCCVSLSAF--YYQNIVPCPTCSCGCSSSHCVKDGELPPYLEQ 271
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 616 PNTPITSCTMHPSPPPANRSSGEY 687
P+TP T+C PSPP + S Y
Sbjct: 58 PSTPTTACPPPPSPPSSGGGSSYY 81
>At5g16560.1 68418.m01938 myb family transcription factor (KAN1)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI1 (KAN1) GI:15723590
Length = 403
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 546 ICTSESEFGNAYRLARSCPQVQ-APEHSHH 632
I S S + NAYR +S P+++ P H HH
Sbjct: 147 ILNSSSGYNNAYRSLQSSPRLKGVPLHHHH 176
>At3g11800.1 68416.m01446 expressed protein
Length = 246
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 198 DHVDRNFTLLIQLQNGKPKLLFWK 269
+H+ +FTL+++ Q G+ + +FWK
Sbjct: 135 NHIVTSFTLVLEFQKGRLENMFWK 158
>At1g79800.1 68414.m09316 plastocyanin-like domain-containing
protein
Length = 192
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 621 HSHHQLHDASLPPACEQVFGGISPLQTLS 707
H HH HDAS+PP+ + SP + S
Sbjct: 136 HQHHD-HDASMPPSMSPLSNSASPYASAS 163
>At1g70280.2 68414.m08086 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 509
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 510 EPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAP 617
EPY LPNG++ +SE N Y+++ S P
Sbjct: 84 EPYSIEVLPNGELLILDSENSNIYKISSSLSLYSRP 119
>At1g70280.1 68414.m08085 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 447
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 510 EPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAP 617
EPY LPNG++ +SE N Y+++ S P
Sbjct: 22 EPYSIEVLPNGELLILDSENSNIYKISSSLSLYSRP 57
>At1g27020.1 68414.m03294 expressed protein
Length = 308
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 448 YIEANGFYLGKLRGLLGDGNTSLTMTSGYLMERSALRKASSVTRTVWPAA 597
Y E NGF L K G+L SL + + E+ + A VT+ V PA+
Sbjct: 214 YFEENGFELNKDGGVLKVSEDSLLLQVSAMSEKLVVEFADGVTQIV-PAS 262
>At5g51760.1 68418.m06418 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; similar to protein phosphatase 2C (GI:10432446)
[Nicotiana tabacum]
Length = 416
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 291 IERKWTGYSKRSFQRIPD 344
+ERKW G KRSF+R+ +
Sbjct: 188 VERKWRGVMKRSFKRMDE 205
>At4g09450.1 68417.m01555 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 200
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 274 ERSIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRIGVGSLYGLMVFC 426
E ++L E G++ NG G P E++ F + N+ G G + +C
Sbjct: 70 EDDYVKLTEAGESKGNGKKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYC 120
>At1g73700.1 68414.m08534 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 476
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 303 WTGYSKRSFQRIPDHRKGCVRFPS 374
WTG+SK +FQ + D K + FPS
Sbjct: 235 WTGFSKEAFQELYDFSK--IAFPS 256
>At5g14520.1 68418.m01702 pescadillo-related similar to pescadillo
[Zebrafish, Danio rerio] SWISS-PROT:P79741
Length = 590
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -3
Query: 239 LKLD*QREV---SIDVVVRQYVATVSWEGEVATVEREDVLTVHN 117
LK REV S+ +V+ + VSWEGE A + +D H+
Sbjct: 340 LKFFLSREVPRESLQLVITAFGGMVSWEGEGAPFKEDDESITHH 383
>At5g02420.1 68418.m00165 expressed protein
Length = 115
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 610 KRPNTPITSCTMHPSPPPANRSSGEYRRFRP 702
K P T C P P NRSSG R+ P
Sbjct: 53 KIPEVKYTLCPPAPRKPKPNRSSGTKRKLTP 83
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 9 KQLYSGDFPDILALLRAYRPRSINPLDEVPSKLR 110
++L +GDF L LL+ Y P +I+ + V KLR
Sbjct: 414 RRLLAGDFTSNLKLLQNYPPTNISHMLYVADKLR 447
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 589 PAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYRRFRP 702
P+ H RPNTP P PPP +++ RR P
Sbjct: 143 PSKTHEPSRPNTP-------PPPPPPSKTHEPSRRITP 173
>At3g16730.1 68416.m02136 expressed protein ; expression supported
by MPSS
Length = 695
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 610 KRPNTPITSCTMHPSPPPANRSS 678
KR +PIT H SPPP R++
Sbjct: 618 KRAKSPITKGKSHESPPPKKRNT 640
>At2g24810.1 68415.m02968 pathogenesis-related thaumatin family
protein similar to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile PF00314:
Thaumatin family
Length = 193
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/31 (54%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 550 ALRKASSVTRTVWPAAV--HRCKRPNTPITS 636
AL SSV TV P V HRCKR T TS
Sbjct: 57 ALASGSSVNLTVSPENVKMHRCKRSTTSHTS 87
>At5g59900.1 68418.m07512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 907
Score = 27.5 bits (58), Expect = 9.3
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 310 AILNGASKGFPIIEKDVFAFR-QPSNRIGVGSLYGLMVFCTSKLEVCYIEANGFYLGKLR 486
A++NG K + E +V + QP + + YG + +K EV +A + L+
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781
Query: 487 GLLGDGNTSLTMTSGYLMERSALRKASSVTRTV 585
GLL + T + G+ + + +TR +
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
>At3g44150.1 68416.m04733 expressed protein hypothetical proteins -
Arabidopsis thaliana
Length = 246
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 126 GQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQNGKPKLLFWK 269
G ++ F GR ++ + +FTL+++ Q G+ + L+WK
Sbjct: 111 GGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWK 158
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 481 LRGLLGDGNTSLTMTSGYLMERSALRKASSVTRT 582
+RGL GDGN L+ + GY +R L + VTR+
Sbjct: 230 VRGL-GDGNRVLSSSVGYGSDRYGLTVSRDVTRS 262
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,391,584
Number of Sequences: 28952
Number of extensions: 357776
Number of successful extensions: 1189
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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