Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0462
(729 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 50 3e-06
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 47 2e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 45 5e-05
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 44 1e-04
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 43 3e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 43 3e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 42 4e-04
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 41 0.001
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.005
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.011
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.034
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.078
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 34 0.10
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 34 0.14
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.31
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 33 0.31
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.41
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.72
SB_56571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 30 1.7
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.9
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.9
SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 5.1
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 29 5.1
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.7
SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49) 28 8.9
SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 28 8.9
SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71) 28 8.9
SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 103 bits (248), Expect = 1e-22
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 175
SGGAAGA SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRG
Sbjct: 119 SGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRG 178
Query: 176 FGVSVQGIIIYRASYFGFYDTARGML 253
F +S GII+YR YFG YDT + +L
Sbjct: 179 FVISCVGIIVYRGFYFGLYDTLKPIL 204
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +3
Query: 354 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL 509
RMMM SG A + YK +I C I K EG + KGA +N+LRG GA VL
Sbjct: 238 RMMMTSGEA---VKYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVL 286
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 274 IVISWAIAQTVTTVAGIISYPFDTVR 351
+VIS+ + VT AG+ SYP DT+R
Sbjct: 211 VVISFVLGYGVTVSAGLASYPIDTIR 236
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 360 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 485
M+++GR D YK I C + ++EG +F++G +N +R
Sbjct: 43 MLKAGRL--DHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIR 82
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 GGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFG 181
GG AGA S YPLD R R+ DG + ++ N + ++K DG+ GLYRG
Sbjct: 179 GGVAGAVSQTIAYPLDVVRRRMQLAGAVPDGHK-YNTCINTLVNVYKDDGIRRGLYRGLS 237
Query: 182 VSVQGIIIYRASYFGFYDTARGML 253
++ + A FG Y+ + L
Sbjct: 238 INYLRVCPQVAIMFGVYEVTKQFL 261
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
+G AG T+ YPLD R+RLA V + G + CIS K G LY+GF
Sbjct: 70 AGSLAGMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGFV 127
Query: 182 VSVQGIIIYRASYFGFY 232
++ + I A GFY
Sbjct: 128 PTL--LTIVPAMGIGFY 142
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF 178
+GG AG T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF
Sbjct: 4 AGGLAGLTACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGF 60
Query: 179 G------VSVQGIIIYR-ASYFGFYDTARGMLPTLRTHP 274
+ GI Y S+ F+ +G+L R HP
Sbjct: 61 TPTSLSMIPAVGIGFYAFESFKDFFVAMKGVL--TRIHP 97
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 GGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFG 181
G AGATS YPLD R R+ DG + +S N ++ DG+ GLYRG
Sbjct: 113 GALAGATSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLS 171
Query: 182 VSVQGIIIYRASYFGFYDTARGML 253
++ + A F Y+ + +L
Sbjct: 172 INYLRVCPQVAVMFAVYEVVKQLL 195
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
+G AG S +YPL+ +TRLA + GQ + GL + S I++ +G+ YRG
Sbjct: 236 AGSMAGVASQTSIYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLF 290
Query: 182 VSVQGIIIYRASYFGFYDTAR 244
S+ GII Y Y+T +
Sbjct: 291 PSLLGIIPYAGIDLAVYETLK 311
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 GGAAGATSLCFVYPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 175
G A+ YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 334 GTASSTCGQLASYPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +2
Query: 23 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 202
T+ YPLD R RLA K +++GL N ++I++ +G+ YRG+ ++ GI+
Sbjct: 2 TAALLTYPLDMVRARLAITQKK-----KYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56
Query: 203 IYRASYFGFYDTAR 244
Y F Y+T +
Sbjct: 57 PYAGISFFTYETCK 70
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
+GG AG +C +P ++ +T+L D + + + G +C+ K K G++GLYRG
Sbjct: 46 AGGIAGGLEICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLS 103
Query: 182 VSVQGIIIYRASYFGFYD 235
+ G + + F ++
Sbjct: 104 SLLYGSVPKASVRFAVFE 121
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGF 178
+GG G + +PLD + RL G++ F+G +C K +++G GLY+G
Sbjct: 32 AGGFGGVCCIATGHPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGM 91
Query: 179 GVSVQGII-IYRASYFGF 229
+ G+ I+ ++GF
Sbjct: 92 AAPITGVTPIFAICFWGF 109
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 175
+G AG T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGL 118
+G AG + +PLD +TRL +G GQR + L
Sbjct: 68 NGAIAGMVGVTCTFPLDLCKTRLQ---NQGSGQRIYKNL 103
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +2
Query: 20 ATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 199
AT VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984
Query: 200 IIYRASYFGFYDTARGM 250
+A D RG+
Sbjct: 985 SPEKAIKLTTNDFVRGI 1001
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 354 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 482
RM Q +++ +YKN+I C+ + + EG ++G +L
Sbjct: 940 RMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +2
Query: 5 GGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGV 184
G AGA + YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 688 GAVAGAVAQSGTYPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWP 745
Query: 185 SVQGIIIYRASYFGFYDTARGML 253
++ + F Y+ ++ +
Sbjct: 746 NLLKVAPTIGIQFAVYEVSKSAM 768
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 104 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDT-ARGMLP 256
++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ +G+ P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 354 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 485
R MQ R + Y +T + I ++EG FKG + N+L+
Sbjct: 706 RRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLK 749
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 175
SGG AG S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G
Sbjct: 363 SGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDG-------------QREFSGLGNCISKIF 142
SG AG P++ A+TR+ G+G Q ++G +C+ K+F
Sbjct: 250 SGAIAGGVQSIVCCPMELAKTRVQVQ-GQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVF 308
Query: 143 KSDGLIGLYRGFGVSVQGIIIYRASYFGFY 232
S+GL G +RG ++ I A YFG +
Sbjct: 309 HSEGLRGCFRGMAITTTRDIPAFALYFGSF 338
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 107 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFG 226
++G+ +C +I K + ++GLY+G + G+ + A FG
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFG 230
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 354 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 485
R MQ ++D YK+T+H +++I K EG +KG + N+L+
Sbjct: 186 RRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNILK 229
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
+GG AGA S V PL+ + L V +F G+ + +I K +G++G ++G G
Sbjct: 40 AGGIAGAVSRTSVSPLERVKILLQIQV----KNPKFKGVLPTLIQIGKEEGILGYFKGNG 95
Query: 182 VSVQGIIIYRASYFGFYDT-ARGMLP 256
+V I Y A F Y+ +G+ P
Sbjct: 96 TNVIRIFPYSAVQFAAYEEYKKGIAP 121
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2
Query: 5 GGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 175
G AGA S YPLD R R+ + D + + S I K +G GLY+G
Sbjct: 168 GSLAGAVSQTATYPLDVVRRRMQMKGIRAD--FAYKSTLHAFSSIVKLEGFRGLYKG 222
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 178
+G AG + + P+D + +L K + + G +C+ K+++S GL G ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGN 98
Query: 179 GVSVQGIIIYRASYFGFYD 235
V+ I A YFG Y+
Sbjct: 99 TVTAVRDIPGFAVYFGVYE 117
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 175
+GG AG S +P D ++R+ AD G+ + G+ +C + +K +G+I RG
Sbjct: 138 AGGFAGVVSWASTFPFDVIKSRIQADGNL--GKFRYKGMMDCALQSYKEEGMIVFTRG 193
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
SG AG + +PLD R RL ++G+ + + +I +G+ GLY+G
Sbjct: 34 SGATAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLV 93
Query: 182 VSVQGIIIYRASYFGFYD 235
S+ I + YD
Sbjct: 94 PSLVSIAPFLGVQQSVYD 111
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 20 ATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 190
ATSLC YP + ARTRL + G++++ + + + +G GLY G G V
Sbjct: 945 ATSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV 999
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 104 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 253
+FSG+ + K++G+ L++G G ++ G+ RA YF Y + ML
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDML 822
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 14 AGATSLCFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 178
AG + C P+D RTR G+ + G +CI K + +G++ LY+GF
Sbjct: 221 AGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
+GG A P+D +L G+GD + + G I + F G G Y+G+
Sbjct: 111 AGGCASIVGQTITVPVDIISQKLMIQ-GQGDRKVKLKGARILIRETFHQHGPGGFYKGYF 169
Query: 182 VSVQ----GIIIYRASYFGFYDTARGMLPTLRTHPL 277
S+ I+ ASY GFY G L TH L
Sbjct: 170 ASLMTYAPSSAIWWASY-GFYTGVIGNLSADGTHRL 204
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 181
+G AG + + PLD R + + K G + G +C+ +I++ G+ G+Y+G
Sbjct: 143 AGMIAGVATSFVLTPLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGIS 200
Query: 182 VS 187
V+
Sbjct: 201 VT 202
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 178
+G AAGA + +PLD + RL A + K + +C KI +++G+ L+RG
Sbjct: 44 AGSAAGAAANLVGFPLDTIKVRLQAMPLPKPGEPWMYKNSFDCFFKIIRNEGVYYLFRGV 103
Query: 179 GVSV 190
V +
Sbjct: 104 TVPI 107
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 178
+ G + F+Y R + V K G + + GLG+C+ +++++ GL G+++G
Sbjct: 165 NAGVFCGVCVSFIYA-PTERVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGL 223
Query: 179 G 181
G
Sbjct: 224 G 224
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +2
Query: 44 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 178
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 175
+G +G PLD + RL A G+ F G +C K + +GL GLY+G
Sbjct: 26 AGSVSGMLGCAAGQPLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 178
+GG AG ++P+D +TR+ A +G R G + + ++ ++G + LY+G+
Sbjct: 225 AGGIAGLALWGLMFPVDMLKTRVQIAPMG-----RYPRGARDVLKEVLCNEGPMALYKGY 279
Query: 179 GVS-VQGIIIYRASYFGFYDTARGM 250
++ ++ + + G+ T + M
Sbjct: 280 VPGMIRAVVTHCGLFIGYEFTMKAM 304
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 38 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 217
V PLD + R+ D +++ + N K DG+ GL RG+ + G +
Sbjct: 73 VVPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126
Query: 218 YFGFYDTARGM 250
FGFY+ + M
Sbjct: 127 KFGFYEVFKIM 137
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 107 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPTL 262
+ G+ +C + +FK +G+ YR + + I ++ +F Y+ AR L L
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPL 83
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.5 bits (68), Expect = 0.72
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 122 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 208
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
>SB_56571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 405 CSCTGYRSWHDQTASSCATDCVEGIGDDTGDCGYGLSDGPADYNGCVLRVGSMPRAVS*K 226
C CTGYR+ D + C G G + G C S+G + +G L PR+++ K
Sbjct: 63 CRCTGYRAILDGYRTLTKDGCCGGKGKNGGCCMQ--SNGTVENDGTNLPEAYKPRSLTIK 120
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 354 RMMMQS---GRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 470
RM +Q R + Y+N H TIAK EG A KG F
Sbjct: 31 RMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLF 72
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 117 RPENSRWPSPLPTSAARRVRAKSRGYTK 34
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 354 RMMMQSGRAKSD--ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 485
+M +Q RA+S I Y+N H TIA+T G ++G + ++R
Sbjct: 228 KMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVR 273
>SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 357 CATDCVEGIGDDTGDCGYGLSDGPADYNG 271
C D +G+G D G CG G +G D +G
Sbjct: 22 CGGDGGDGVGGDGGCCGDGEGNGDGDGDG 50
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 183 TPKPLYRPIRPSDLKILLMQFPRPENSRWPSPLPTSAARRVRAKSRGYTKHREVAPAAP 7
T K P+ P+ L + P+P + P P+ TSAA+ + + G +PA P
Sbjct: 816 TAKSSTPPVPPASLSTISTT-PQPITTSAPQPITTSAAQPITTLAAGPDVTGMASPAVP 873
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 204 MMIPCTDTPKPLYRPIRPSDLKILLMQ 124
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 122 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPTL 262
+C K FK +G GLY G S+ I + F FY ++ TL
Sbjct: 49 DCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFYGQCLSLIKTL 95
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Frame = +2
Query: 2 SGGAAGATSLCFVYPLDFARTRLA--------ADVGKG---DGQREFSGLGNCISKIFKS 148
S G A + + P+D A+ RL A + +G + G+ + +FK+
Sbjct: 20 SAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKT 79
Query: 149 DGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGM 250
+G+ +Y+G + + + + G YD + M
Sbjct: 80 EGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAM 113
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 17 GATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 196
G ++ P + + R AD G R SG ++I +++G+ GL++G ++
Sbjct: 135 GIMAVSVAQPTEVVKIRFQADAG-----RYTSGTMGTYAEIARNEGMKGLWKGVFPNMAR 189
Query: 197 IIIYRASYFGFYDTARGM 250
+ + YD+ +G+
Sbjct: 190 LCTVNVTELVVYDSIKGL 207
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 381 KSDILYKNTIHCWATIAKTEGTSAFFKG---AFSNVLRGTGGAFV 506
KS+ YK H TI + EG A +KG +F + GG+F+
Sbjct: 187 KSNAHYKGMRHALKTILREEGILALYKGVTPSFLGLFPFAGGSFL 231
>SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49)
Length = 351
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 86 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 253
+G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D R ++
Sbjct: 104 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 154
>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
Length = 225
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 113 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFY 232
G C S + + G+ + GFG QG++++ + GFY
Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128
>SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71)
Length = 238
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 86 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 253
+G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D R ++
Sbjct: 55 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 105
>SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 333 IGDDTGDCGYGLSDGPADYNGCVL-RVGSMP 244
+ +D GYG ++ P Y GC++ R+ S+P
Sbjct: 481 VTEDALSPGYGKTEKPLGYRGCIIARIRSIP 511
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,344,910
Number of Sequences: 59808
Number of extensions: 392435
Number of successful extensions: 1904
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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