Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0461
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.3  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 35  GRAAVVTILETLELISQGGWRI 100
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 424  YTIVPCIIV*RIEYSVYLTNNIEYST 501
            Y  VP + +  + YSV+  NN+ + T
Sbjct: 1009 YVTVPSMYLLLVIYSVFNMNNVSWGT 1034


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 424  YTIVPCIIV*RIEYSVYLTNNIEYST 501
            Y  VP + +  + YSV+  NN+ + T
Sbjct: 1009 YVTVPSMYLLLVIYSVFNMNNVSWGT 1034


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 675 VWF*YEFVRLKIFSSSYTGPCRNYMIVXLLSDYAII 568
           +W  YE   L I  S  +  C  ++I+  LS Y +I
Sbjct: 245 IWTIYEMYHLAILWSCTSTNCPRFLIMLALS-YTVI 279


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 368 CARREASITPQGYQQIDRNKKFCFN 294
           C RR    T   +Q ++  K+F FN
Sbjct: 4   CPRRRGRQTYTRFQTLELEKEFHFN 28


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 368 CARREASITPQGYQQIDRNKKFCFN 294
           C RR    T   +Q ++  K+F FN
Sbjct: 155 CPRRRGRQTYTRFQTLELEKEFHFN 179


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 368 CARREASITPQGYQQIDRNKKFCFN 294
           C RR    T   +Q ++  K+F FN
Sbjct: 214 CPRRRGRQTYTRFQTLELEKEFHFN 238


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 133 WLLEPIDIYNVNAPPTLRYK 74
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,498
Number of Sequences: 336
Number of extensions: 3188
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)