Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0461
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92827-4|CAB07323.1|  722|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U32305-20|AAK18863.1|  796|Caenorhabditis elegans Worm armadillo...    27   9.5  
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri...    27   9.5  
AF016686-5|ABO16458.1|  407|Caenorhabditis elegans Hypothetical ...    27   9.5  
AF013951-1|AAC47748.1|  796|Caenorhabditis elegans wrm-1 protein.      27   9.5  
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ...    27   9.5  

>Z92827-4|CAB07323.1|  722|Caenorhabditis elegans Hypothetical
           protein C29F7.5 protein.
          Length = 722

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +3

Query: 522 NVWSAILLCYELYAIILWRSLKAGLQSYNFDMDRYKN 632
           N+++ +L C EL+AIIL  ++++  ++  F  ++Y N
Sbjct: 282 NLYTFLLHCLELFAIILLFAMQSNDENIYFPANQYVN 318


>U32305-20|AAK18863.1|  796|Caenorhabditis elegans Worm armadillo
           protein 1 protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = +1

Query: 463 YSVYLTNNIEYSTVYDVSIIMYGARYCCAMSYMLLYYG 576
           Y + +T  I+  T ++ S ++     CC   +M +++G
Sbjct: 282 YEIVMTRAIQLDTKFESSAMVLLVHLCCKPHFMKIFFG 319


>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
           protein 2 protein.
          Length = 1262

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +3

Query: 276 LTMIGGIETKLFVPIYLLVTLRGYASFTASALSSAWNKQNHVLSCFQTTLYYSAMY 443
           +T  G +    F   YL +T+     F    +S  W   +++LSC + +L  SA+Y
Sbjct: 614 MTEAGELSQLWFREFYLEMTMGQRIQFPIE-MSMPWILTDYILSCNEPSLIESALY 668


>AF016686-5|ABO16458.1|  407|Caenorhabditis elegans Hypothetical
           protein R07C3.7 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2

Query: 212 YGYXTFLRINTELTRPFGEHRIN 280
           YGY T LRINT   R    H IN
Sbjct: 294 YGYHTLLRINTGYPRIHVTHSIN 316


>AF013951-1|AAC47748.1|  796|Caenorhabditis elegans wrm-1 protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = +1

Query: 463 YSVYLTNNIEYSTVYDVSIIMYGARYCCAMSYMLLYYG 576
           Y + +T  I+  T ++ S ++     CC   +M +++G
Sbjct: 282 YEIVMTRAIQLDTKFESSAMVLLVHLCCKPHFMKIFFG 319


>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
           protein.
          Length = 1262

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +3

Query: 276 LTMIGGIETKLFVPIYLLVTLRGYASFTASALSSAWNKQNHVLSCFQTTLYYSAMY 443
           +T  G +    F   YL +T+     F    +S  W   +++LSC + +L  SA+Y
Sbjct: 614 MTEAGELSQLWFREFYLEMTMGQRIQFPIE-MSMPWILTDYILSCNEPSLIESALY 668


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,336,259
Number of Sequences: 27780
Number of extensions: 273154
Number of successful extensions: 456
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)