SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0458
         (764 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY576987-1|AAT77612.1| 2061|Homo sapiens HSPC069 isoform a protein.    34   0.48 
AJ238403-1|CAC28349.1| 2061|Homo sapiens huntingtin interacting ...    34   0.48 
BC117164-1|AAI17165.1| 2061|Homo sapiens SET domain containing 2...    34   0.64 
BC117162-1|AAI17163.1| 2061|Homo sapiens SET domain containing 2...    34   0.64 
BC090954-1|AAH90954.1| 1845|Homo sapiens SETD2 protein protein.        34   0.64 
AB051519-1|BAB21823.2| 1915|Homo sapiens KIAA1732 protein protein.     34   0.64 
BC104904-1|AAI04905.1| 1944|Homo sapiens anaphase promoting comp...    31   6.0  
BC104902-1|AAI04903.1| 1944|Homo sapiens anaphase promoting comp...    31   6.0  
BC005089-1|AAH05089.1|  311|Homo sapiens ANAPC1 protein protein.       31   6.0  
AK023807-1|BAB14687.1| 1424|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AJ278357-1|CAC19484.1| 1944|Homo sapiens Tsg24 protein protein.        31   6.0  

>AY576987-1|AAT77612.1| 2061|Homo sapiens HSPC069 isoform a protein.
          Length = 2061

 Score = 34.3 bits (75), Expect = 0.48
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465  KIRRNVQHRTKTTSWCLSGLLSNNGGIKRRNEVQRIARLMSKYSKKLVSKCIYIPILKCT 644
            K+++    +  +    L  L+ N  G+  +N+V  ++RLM +  + L  K   + +++ T
Sbjct: 1200 KMKKERSRKKDSVDGELEALMENGEGLSDKNQVPSLSRLMVRI-ETLEQKLTCLELIQNT 1258

Query: 645  ETE-LLDLFLRYXGWLLIHLWLTE 713
             ++  L  FL   G  L+ +W+ E
Sbjct: 1259 HSQSCLKSFLERHGLSLLWIWMAE 1282


>AJ238403-1|CAC28349.1| 2061|Homo sapiens huntingtin interacting
            protein 1 protein.
          Length = 2061

 Score = 34.3 bits (75), Expect = 0.48
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465  KIRRNVQHRTKTTSWCLSGLLSNNGGIKRRNEVQRIARLMSKYSKKLVSKCIYIPILKCT 644
            K+++    +  +    L  L+ N  G+  +N+V  ++RLM +  + L  K   + +++ T
Sbjct: 1200 KMKKERSRKKDSVDGELEALMENGEGLSDKNQVPSLSRLMVRI-ETLEQKLTCLELIQNT 1258

Query: 645  ETE-LLDLFLRYXGWLLIHLWLTE 713
             ++  L  FL   G  L+ +W+ E
Sbjct: 1259 HSQSCLKSFLERHGLSLLWIWMAE 1282


>BC117164-1|AAI17165.1| 2061|Homo sapiens SET domain containing 2
            protein.
          Length = 2061

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465  KIRRNVQHRTKTTSWCLSGLLSNNGGIKRRNEVQRIARLMSKYSKKLVSKCIYIPILKCT 644
            K+++    +  +    L  L+ N  G+  +N+V  ++RLM +  + L  K   + +++ T
Sbjct: 1200 KMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRI-ETLEQKLTCLELIQNT 1258

Query: 645  ETE-LLDLFLRYXGWLLIHLWLTE 713
             ++  L  FL   G  L+ +W+ E
Sbjct: 1259 HSQSCLKSFLERHGLSLLWIWMAE 1282


>BC117162-1|AAI17163.1| 2061|Homo sapiens SET domain containing 2
            protein.
          Length = 2061

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465  KIRRNVQHRTKTTSWCLSGLLSNNGGIKRRNEVQRIARLMSKYSKKLVSKCIYIPILKCT 644
            K+++    +  +    L  L+ N  G+  +N+V  ++RLM +  + L  K   + +++ T
Sbjct: 1200 KMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRI-ETLEQKLTCLELIQNT 1258

Query: 645  ETE-LLDLFLRYXGWLLIHLWLTE 713
             ++  L  FL   G  L+ +W+ E
Sbjct: 1259 HSQSCLKSFLERHGLSLLWIWMAE 1282


>BC090954-1|AAH90954.1| 1845|Homo sapiens SETD2 protein protein.
          Length = 1845

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465  KIRRNVQHRTKTTSWCLSGLLSNNGGIKRRNEVQRIARLMSKYSKKLVSKCIYIPILKCT 644
            K+++    +  +    L  L+ N  G+  +N+V  ++RLM +  + L  K   + +++ T
Sbjct: 984  KMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRI-ETLEQKLTCLELIQNT 1042

Query: 645  ETE-LLDLFLRYXGWLLIHLWLTE 713
             ++  L  FL   G  L+ +W+ E
Sbjct: 1043 HSQSCLKSFLERHGLSLLWIWMAE 1066


>AB051519-1|BAB21823.2| 1915|Homo sapiens KIAA1732 protein protein.
          Length = 1915

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465  KIRRNVQHRTKTTSWCLSGLLSNNGGIKRRNEVQRIARLMSKYSKKLVSKCIYIPILKCT 644
            K+++    +  +    L  L+ N  G+  +N+V  ++RLM +  + L  K   + +++ T
Sbjct: 1054 KMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRI-ETLEQKLTCLELIQNT 1112

Query: 645  ETE-LLDLFLRYXGWLLIHLWLTE 713
             ++  L  FL   G  L+ +W+ E
Sbjct: 1113 HSQSCLKSFLERHGLSLLWIWMAE 1136


>BC104904-1|AAI04905.1| 1944|Homo sapiens anaphase promoting complex
            subunit 1 protein.
          Length = 1944

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 576  RLMSKYSKKLVSKCIYIPILKCTETELLDLFLRYXGWLLIHLWLT 710
            RL +   + L     ++P++KCT    LD +L+  G + +H +L+
Sbjct: 1829 RLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWLQVGGDMCVHAYLS 1873


>BC104902-1|AAI04903.1| 1944|Homo sapiens anaphase promoting complex
            subunit 1 protein.
          Length = 1944

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 576  RLMSKYSKKLVSKCIYIPILKCTETELLDLFLRYXGWLLIHLWLT 710
            RL +   + L     ++P++KCT    LD +L+  G + +H +L+
Sbjct: 1829 RLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWLQVGGDMCVHAYLS 1873


>BC005089-1|AAH05089.1|  311|Homo sapiens ANAPC1 protein protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 576 RLMSKYSKKLVSKCIYIPILKCTETELLDLFLRYXGWLLIHLWLT 710
           RL +   + L     ++P++KCT    LD +L+  G + +H +L+
Sbjct: 196 RLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWLQVGGDMCVHAYLS 240


>AK023807-1|BAB14687.1| 1424|Homo sapiens protein ( Homo sapiens cDNA
            FLJ13745 fis, clone PLACE3000244, highly similar to
            PROTEIN TSG24 (MEIOTIC CHECK POINT REGULATOR). ).
          Length = 1424

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 576  RLMSKYSKKLVSKCIYIPILKCTETELLDLFLRYXGWLLIHLWLT 710
            RL +   + L     ++P++KCT    LD +L+  G + +H +L+
Sbjct: 1309 RLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWLQVGGDMCVHAYLS 1353


>AJ278357-1|CAC19484.1| 1944|Homo sapiens Tsg24 protein protein.
          Length = 1944

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 576  RLMSKYSKKLVSKCIYIPILKCTETELLDLFLRYXGWLLIHLWLT 710
            RL +   + L     ++P++KCT    LD +L+  G + +H +L+
Sbjct: 1829 RLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWLQVGGDMCVHAYLS 1873


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,937,123
Number of Sequences: 237096
Number of extensions: 1734302
Number of successful extensions: 2415
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2415
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -