Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0458
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z49074-1|CAA88893.3|  771|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z49073-8|CAA88892.3|  771|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z92827-1|CAB07326.1|  394|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z69791-4|CAA93658.2|  362|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 404 ALNFSI--LIWRLVYXTVLSQTKH*FLIYTVQN*RLSPRNYYFNKIIT 267
           A N+S+  L W  V    L+  +H   IY      L+P  Y++NK +T
Sbjct: 256 AFNYSVFPLFWAGVEVNYLNSKEHLITIYEQLPILLAPEKYHYNKELT 303


>Z49074-1|CAA88893.3|  771|Caenorhabditis elegans Hypothetical
           protein ZK970.1a protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 404 ALNFSI--LIWRLVYXTVLSQTKH*FLIYTVQN*RLSPRNYYFNKIIT 267
           A N+S+  L W  V    L+  +H   IY      L+P  Y++NK +T
Sbjct: 220 AFNYSVFPLFWAGVEVNYLNSKEHLITIYEQLPILLAPEKYHYNKELT 267


>Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 404 ALNFSI--LIWRLVYXTVLSQTKH*FLIYTVQN*RLSPRNYYFNKIIT 267
           A N+S+  L W  V    L+  +H   IY      L+P  Y++NK +T
Sbjct: 256 AFNYSVFPLFWAGVEVNYLNSKEHLITIYEQLPILLAPEKYHYNKELT 303


>Z49073-8|CAA88892.3|  771|Caenorhabditis elegans Hypothetical
           protein ZK970.1a protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 404 ALNFSI--LIWRLVYXTVLSQTKH*FLIYTVQN*RLSPRNYYFNKIIT 267
           A N+S+  L W  V    L+  +H   IY      L+P  Y++NK +T
Sbjct: 220 AFNYSVFPLFWAGVEVNYLNSKEHLITIYEQLPILLAPEKYHYNKELT 267


>Z92827-1|CAB07326.1|  394|Caenorhabditis elegans Hypothetical
           protein C29F7.1 protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 442 INLKLSTVKLEEMSSIEPKQLLGALVDFFLIMVALNAE--TKSKGLHVL 582
           +NL + ++  EE  S+ P   +   VD F  MV   AE   KS GL ++
Sbjct: 173 VNLHIFSLTTEEWRSVLPDSAMRDTVDLFEAMVKTIAENMAKSPGLEII 221


>Z69791-4|CAA93658.2|  362|Caenorhabditis elegans Hypothetical
           protein F39D8.3 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 172 PHSDT*NNHSNYAIIKNVNLKDCKFMW 252
           PH      H N+ +++NV  K+C+ +W
Sbjct: 312 PHGKCRQKHMNFVVLRNVGTKECQ-VW 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,413,198
Number of Sequences: 27780
Number of extensions: 298397
Number of successful extensions: 711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)