Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0455
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13; Endopt... 111 8e-24
UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8... 97 2e-19
UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gamb... 94 2e-18
UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella ve... 85 6e-16
UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44; Coelom... 81 1e-14
UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1; ... 78 1e-13
UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 ... 72 8e-12
UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3; Ixodoid... 70 3e-11
UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma... 65 1e-09
UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=1... 64 2e-09
UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17; Magn... 62 5e-09
UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8; Pezizom... 60 2e-08
UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7; Pezizomy... 60 3e-08
UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=... 57 3e-07
UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2; Caenorh... 54 2e-06
UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthor... 52 1e-05
UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 49 5e-05
UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1; F... 49 5e-05
UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2; Cryptos... 46 4e-04
UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150, w... 46 5e-04
UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2; Dictyos... 44 0.001
UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9; Trypano... 40 0.023
UniRef50_A4S554 Cluster: Ribosomal protein L28, component of cyt... 38 0.13
UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing pr... 35 1.2
UniRef50_A7AMH8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_UPI00006CFBC8 Cluster: hypothetical protein TTHERM_0048... 34 1.5
UniRef50_Q4UBK1 Cluster: 60S ribosomal protein l28, putative; n=... 34 1.5
UniRef50_Q09F08 Cluster: Ymf77; n=1; Tetrahymena pigmentosa|Rep:... 33 4.7
UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, wh... 32 6.2
UniRef50_Q8GCM9 Cluster: ORF228; n=2; Mycoplasma|Rep: ORF228 - M... 32 8.2
>UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13;
Endopterygota|Rep: 60S ribosomal protein L28 -
Drosophila melanogaster (Fruit fly)
Length = 144
Score = 111 bits (267), Expect = 8e-24
Identities = 47/76 (61%), Positives = 62/76 (81%)
Frame = +3
Query: 36 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 215
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 216 FTVVYKKAKATRKPLK 263
FT V KK K ++P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +2
Query: 206 QEGIHSSVQESKGYQKAAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 385
++G + +++ K Q+ AKN +R FKAG RRSL K+K LL + YR DL +A LRRASA
Sbjct: 61 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASA 120
Query: 386 ILRSQRP 406
+LRSQ+P
Sbjct: 121 VLRSQKP 127
>UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8;
Neoptera|Rep: Ribosomal protein L28-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 139
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
MS+ L WMI RNNNA+L+KKR+IKKPFS EP N+ N+ SFRYNGL+ K V V D K
Sbjct: 1 MSADLYWMITRNNNAYLLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGK 60
Query: 213 GFTVVYKKAKATRKPLKT 266
GF V K+AK KP K+
Sbjct: 61 GFVVTTKRAKQQNKPGKS 78
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +2
Query: 209 EGIHSSVQESKGYQKAAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 388
+G + + +K K K+ I AG RRSLYK++R L YR DL + LR+ASAI
Sbjct: 60 KGFVVTTKRAKQQNKPGKSNISVTMSAGPRRSLYKLRRYLDGGKYRKDLTQVALRKASAI 119
Query: 389 LRSQR 403
L SQ+
Sbjct: 120 LESQK 124
>UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014265 - Anopheles gambiae
str. PEST
Length = 158
Score = 93.9 bits (223), Expect = 2e-18
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +3
Query: 27 VKMSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPD 206
+ SS LNW+I+R++NAFL+K+R+I+KPFS EP N+TNL SFRY+GL+H K + + +
Sbjct: 1 IMASSHLNWLIVRDHNAFLLKRRDIRKPFSTEPGNLTNLSSFRYSGLVHHKTI-TITPAE 59
Query: 207 RKGFTVVYKKAKATRKPLK 263
+KG VY + K KP K
Sbjct: 60 KKGVNFVYNRKKVLNKPAK 78
Score = 62.9 bits (146), Expect = 4e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 206 QEGIHSSVQESKGYQKAAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 385
++G++ K K AK ++ K G RR+L K+ ++KAN YR DL A LRRASA
Sbjct: 60 KKGVNFVYNRKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYRADLRGAALRRASA 119
Query: 386 ILRSQRP 406
ILRSQRP
Sbjct: 120 ILRSQRP 126
>UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 137
Score = 85.4 bits (202), Expect = 6e-16
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
MSS L W IIRNN+ FLV+ + K +KEPNNVT L++F+YNGL++KK VGV P K
Sbjct: 1 MSSDLQWSIIRNNSCFLVRSQG--KTLTKEPNNVTGLNAFKYNGLVNKKVVGVDAAPSGK 58
Query: 213 GFTVVYKKAKATRKPLK 263
G + +K KA KP K
Sbjct: 59 GVVITTRKNKAANKPGK 75
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +2
Query: 200 P*QEGIHSSVQESKGYQKAAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRA 379
P +G+ + +++K K K + + +RR+L ++ + N+YR DL +RRA
Sbjct: 55 PSGKGVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMDLKDPAMRRA 114
Query: 380 SAILRSQRP 406
AILRSQ+P
Sbjct: 115 CAILRSQKP 123
>UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44;
Coelomata|Rep: 60S ribosomal protein L28 - Homo sapiens
(Human)
Length = 137
Score = 81.4 bits (192), Expect = 1e-14
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 213 GFTVVYKKAKATRKP 257
G VV K+ RKP
Sbjct: 59 GVVVVIKRRSGQRKP 73
Score = 56.0 bits (129), Expect = 4e-07
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +2
Query: 209 EGIHSSVQESKGYQKAAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 388
+G+ ++ G +K A + +R AR +L ++ +++ N YR DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 389 LRSQRPI 409
LRSQ+P+
Sbjct: 118 LRSQKPV 124
>UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 77.8 bits (183), Expect = 1e-13
Identities = 31/76 (40%), Positives = 51/76 (67%)
Frame = +3
Query: 36 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 215
S L W+++RNN++F+VK++ I + FS+EP N+ LHS++Y+GL++ KAVG+ KG
Sbjct: 3 SQDLQWLLVRNNSSFIVKQKGIGRIFSREPRNLVQLHSYKYSGLVNAKAVGIEAAKSGKG 62
Query: 216 FTVVYKKAKATRKPLK 263
+ K AK + +K
Sbjct: 63 VVITTKNAKQSSSAIK 78
>UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 -
Suberites domuncula (Sponge)
Length = 136
Score = 71.7 bits (168), Expect = 8e-12
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKP---FSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 203
MS+ L W +I+N+++FL++++ + F+ EPNNV N +SF++NGL++KK VGV
Sbjct: 1 MSAELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAA 60
Query: 204 DRKGFTVVYKKAKATRKPLK 263
D KG K++K KP K
Sbjct: 61 DNKGVLFKTKRSKVVSKPAK 80
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 209 EGIHSSVQESKGYQKAAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 388
+G+ + SK K AK +R RR+ +K+ L+ YR DL + +RRASAI
Sbjct: 63 KGVLFKTKRSKVVSKPAKMFVRATLSKDRRRAFKSIKKNLECTEYRPDLAELAVRRASAI 122
Query: 389 LRSQRP 406
L SQRP
Sbjct: 123 LSSQRP 128
>UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3;
Ixodoidea|Rep: 60S ribosomal protein L28 - Argas
monolakensis
Length = 142
Score = 69.7 bits (163), Expect = 3e-11
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
+S + WM++RN ++FLVKKRNIKK FS +P N +++ R+ G I K+A+ V + K
Sbjct: 2 VSRTYRWMVVRNCSSFLVKKRNIKKWFSTDPLNPKGVYANRFAGTIKKRALTVEPHSSGK 61
Query: 213 GFTVVYKKAKATRKPLK 263
G T VY K KP K
Sbjct: 62 GVTFVYLAHKGATKPAK 78
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 KGYQKAAKNLIRRPFKAGARRSLYKVKRLLKA-NHYRTDLCKATLRRASAILRSQRPI 409
KG K AK L R G RR++ ++ +K +YR DL + RRASAIL+SQR I
Sbjct: 71 KGATKPAKRLKRVQLVKGPRRTMVSIRNWIKGMGYYRRDLRRVCQRRASAILKSQRAI 128
>UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma
japonicum|Rep: Ribosomal protein L28 - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
MSS L W +I+NN+ FL+K+ + FS++P N+ N + FRY G +HKKA+G+ E K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGPVHKKAIGIKEERYGK 58
Query: 213 GFTVVYKKAKATRKPLK 263
G V K KP K
Sbjct: 59 GVVVTTKNVAKDHKPAK 75
>UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=19;
Neodiplogasteridae|Rep: Large subunit ribosomal protein
28 - Pristionchus sp. 11 RS5228
Length = 127
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +3
Query: 57 IIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKK 236
+IRNN+AFL ++R I+K FS+EP N+ ++S YNGL + KAVGV D K +VV
Sbjct: 2 VIRNNSAFLRRQRGIQKAFSREPLNLKGINSPNYNGLTNNKAVGVTLAEDNK--SVVVSV 59
Query: 237 AKATRKPLKT*SAVHSRLVPGG 302
K +K L S + + + GG
Sbjct: 60 KKTGKKNLPAQSVIKTTIKRGG 81
>UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17;
Magnoliophyta|Rep: 60S ribosomal protein L28-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 62.5 bits (145), Expect = 5e-09
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 45 LNWMIIRNNNAFLVK---KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 215
L W I++NNN FLVK + N K FSKE NN+TN+HS++++GL +KK V + +
Sbjct: 8 LIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQA 67
Query: 216 FTVVYKKAKATRKP 257
+ K K KP
Sbjct: 68 VVLATTKTKKQNKP 81
>UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8;
Pezizomycotina|Rep: 60S ribosomal protein L28 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 157
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 209
+SS L W I RN NAFLVK+R FS++P N+ N SF+Y G + KAVG V+ +
Sbjct: 8 VSSDLVWQITRNQNAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVG-VQATEN 66
Query: 210 KGFTVVYKKAKATRKPLK 263
G V+ KK ++P K
Sbjct: 67 GGVVVITKKPGNPQQPAK 84
Score = 35.1 bits (77), Expect = 0.88
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 248 QKAAKNLIRRPFKAGAR-RSLYK-VKRLLKANHYRTDLCKATLRRASAILRSQRP 406
Q+ AKNL+ + A R +YK V N YR DL + + R SAI RSQ+P
Sbjct: 80 QQPAKNLVSVSWGPNAATRKIYKAVASKTAKNGYRADLREDAVARVSAIRRSQKP 134
>UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7;
Pezizomycotina|Rep: RIB40 genomic DNA, SC111 -
Aspergillus oryzae
Length = 157
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 209
+SS L W + RN NAFLVK+ + FS++P N+ N HSF+Y G + KA+G V+ +
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAIG-VQPTEN 66
Query: 210 KGFTVVYKKAKATRKPLK 263
G V+ KK+ ++P K
Sbjct: 67 GGVVVLTKKSGNAQQPGK 84
Score = 36.7 bits (81), Expect = 0.29
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 212 GIHSSVQESKGYQKAAKNLIRRPF--KAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 385
G+ ++S Q+ KN +R F KA R+ V N YR DL + + R SA
Sbjct: 68 GVVVLTKKSGNAQQPGKNAVRVTFGPKASTRKIYKGVADKTAKNGYRADLREDAVARVSA 127
Query: 386 ILRSQRP 406
I RSQ+P
Sbjct: 128 IRRSQKP 134
>UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=1;
Schizosaccharomyces pombe|Rep: Probable 60S ribosomal
protein L28e - Schizosaccharomyces pombe (Fission yeast)
Length = 134
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 27 VKMSSSLNWMIIRNNNAFLVKKRNIKK-PFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 203
+ +S+ L W +IR+NN FLVK+ F++EP NV+ ++ R++GL + KAVGV N
Sbjct: 1 MSVSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANS 60
Query: 204 DRKGFTVVYKKAKATRKPLK 263
R + K +KP K
Sbjct: 61 PRGVVLITKTNPKNAQKPAK 80
Score = 37.5 bits (83), Expect = 0.17
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 239 KGYQKAAKNLIRRPFKAGAR-RSLYK-VKRLLKANHYRTDLCKATLRRASAILRSQRP 406
K QK AK L R+ A A R YK + + YR DL K ++ RASAIL SQRP
Sbjct: 73 KNAQKPAK-LFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVARASAILSSQRP 129
>UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L28 -
Caenorhabditis elegans
Length = 126
Score = 53.6 bits (123), Expect = 2e-06
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
MS +L W +IRNN+AFL +R I K FS E N+ ++S +Y+GL +K A+ V + K
Sbjct: 1 MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAK 58
Query: 213 GFTVVYKKAK 242
G V K K
Sbjct: 59 GVVVSTKNEK 68
>UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthora
infestans|Rep: Ribosomal protein L28 - Phytophthora
infestans (Potato late blight fungus)
Length = 139
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 36 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 215
S +L W++ +N ++FLVK+ F++E N+ N + +Y+GL KAV + D+K
Sbjct: 3 SDTLTWLLTKNTSSFLVKRNG--NEFAREKFNLLNRNCRKYSGLASTKAVD-ISISDKK- 58
Query: 216 FTVVYKKAKATRKPLKT*SAVHSR 287
T+ K KAT+KP K +AV R
Sbjct: 59 VTLTTKIEKATKKPAKAQNAVPLR 82
>UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 183
Score = 49.2 bits (112), Expect = 5e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
+S+ W ++ NA+LVK++ I S++P + NL + +GL H KAVGV
Sbjct: 48 VSNDFIWECTKSTNAYLVKRKGIDTTLSRDPYALNNLSTHYESGLSHDKAVGVHYCKPSG 107
Query: 213 GFTVVYKKAKATRKPLKT 266
V+ K K KP K+
Sbjct: 108 KICVITKVVKNANKPAKS 125
>UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: 60s ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 156
Score = 49.2 bits (112), Expect = 5e-05
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 212
MSS L W+++RN N+F VK + FS+E N+ N + +Y+GL + K V + +P
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSI--HPSAA 57
Query: 213 GFTVVYKKAKATRKPLKT*SA 275
G + K KA KP + SA
Sbjct: 58 G-GITITKIKADAKPNQVASA 77
>UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L28 -
Cryptosporidium parvum Iowa II
Length = 127
Score = 46.4 bits (105), Expect = 4e-04
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = +3
Query: 36 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 215
S+ L W ++ N +F+ K+N F+ EP N+ NL++ +Y+GL ++++ + P+ G
Sbjct: 3 STELLWQCVKKNTSFI--KKNNGFTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSNG 60
Query: 216 FTVVYKKAKATRK 254
V K AK T+K
Sbjct: 61 KLV--KNAKITKK 71
>UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_150,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVV 194
MS + W +++ NNAFLVK+ + S +P N T + ++ G I K AVGVV
Sbjct: 1 MSQQVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFISKNAVGVV 52
>UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L28
- Dictyostelium discoideum (Slime mold)
Length = 132
Score = 44.4 bits (100), Expect = 0.001
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVE-NPDR 209
MS L W II+ NNAFL + S EP N+ N +S +Y+GL + + V N
Sbjct: 1 MSQDLVWSIIKKNNAFLKSSHGL--TLSAEPGNLRNKNSLKYSGLARRTTIDVAAVNGKV 58
Query: 210 KGFTVVYKKA--KATRKPLKT*SAVHSR 287
+ + KKA A K T S V++R
Sbjct: 59 VVSSKIVKKAAFPAQSKKTTTFSTVNTR 86
>UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 192
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 MSSSLNWMIIRNNNAFLVKKR-NIKKPFSKEPNNVTNLHSFR 155
+SS L W + RN NA+LVK+ + FS++P NV N HSF+
Sbjct: 8 VSSDLVWQLTRNQNAYLVKRNTHGGVQFSRDPLNVLNKHSFK 49
>UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein L28 -
Trypanosoma cruzi
Length = 146
Score = 40.3 bits (90), Expect = 0.023
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +3
Query: 36 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 215
S+ L W+++R N+ FL K+ I+ S +P N + R+ G ++ KA V DR
Sbjct: 4 STDLQWLLVRQNSKFLQKRNGIR--LSSDPFNNNANWTKRHAGFLNTKAAVVKTKGDR-- 59
Query: 216 FTVVYKKAKATRKP 257
V K KA KP
Sbjct: 60 ILVTTKDGKAGNKP 73
>UniRef50_A4S554 Cluster: Ribosomal protein L28, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L28, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 121
Score = 37.9 bits (84), Expect = 0.13
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 27 VKMSSSLNWMIIRNNNAFL-VKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 203
V S W + + +NAF FS EP NVT SFR +GL + K + + E+
Sbjct: 5 VPASDDFLWQVTKKHNAFTRASTSGHGARFSAEPGNVTAEVSFRASGLANAKTIDIREHD 64
Query: 204 DRKG 215
KG
Sbjct: 65 GGKG 68
>UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclin,
N-terminal domain containing protein - Tetrahymena
thermophila SB210
Length = 353
Score = 34.7 bits (76), Expect = 1.2
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 30 KMSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNN-VTN-LHSFRYNGLIHKKAVGVVENP 203
K S LNW + N + K+NIK K+ NN +TN L F +N I+K+ + ++E
Sbjct: 36 KKKSYLNWQGCKKINNKQINKQNIKATQIKKKNNQLTNSLLGFSFNQSINKQIIQLLEIN 95
Query: 204 DRKGFTVVYKKAKATRKPLK 263
K K + RK +K
Sbjct: 96 KIKEKKKETKNKQIKRKEIK 115
>UniRef50_A7AMH8 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 146
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +3
Query: 45 LNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTV 224
L W +I+ NNA++ K + + F+KE N+ H+ Y+GL+ + + +P +
Sbjct: 27 LVWELIKKNNAYIFKSGH--ETFTKERYNLMARHTPMYSGLMQNSVMNLELSPSGSKIVL 84
Query: 225 VYKKAKATRKP 257
+ R+P
Sbjct: 85 TSMDLQNARQP 95
>UniRef50_UPI00006CFBC8 Cluster: hypothetical protein
TTHERM_00487140; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00487140 - Tetrahymena
thermophila SB210
Length = 294
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 39 SSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVT 137
S L W I++NNNAFLVK + F+ +P +VT
Sbjct: 2 SQLVWEIVKNNNAFLVKNNGV--AFTTDPFSVT 32
>UniRef50_Q4UBK1 Cluster: 60S ribosomal protein l28, putative; n=2;
Theileria|Rep: 60S ribosomal protein l28, putative -
Theileria annulata
Length = 150
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 45 LNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGL 167
L W ++RNN+AFL K R FS E +N+ + HS R+ L
Sbjct: 20 LLWELVRNNHAFLKKSRT--TTFSLESHNLLSKHSPRFTVL 58
>UniRef50_Q09F08 Cluster: Ymf77; n=1; Tetrahymena pigmentosa|Rep:
Ymf77 - Tetrahymena pigmentosa
Length = 1260
Score = 32.7 bits (71), Expect = 4.7
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 45 LNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 209
L W+ + NNN FL K N+K + N+ N + + N I +GV++ D+
Sbjct: 161 LFWIKLNNNNIFLKKNNNLKNLKNLNLKNLKNSINNK-NNFIKINEIGVIDKKDK 214
>UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 131
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 245 YQKAAKNLIRRPFKAGARRSLYKVKRLLKAN 337
Y++ N +++ FK GA +SL KRL+KAN
Sbjct: 66 YKRKILNKLKKRFKMGAHKSLRMKKRLIKAN 96
>UniRef50_Q8GCM9 Cluster: ORF228; n=2; Mycoplasma|Rep: ORF228 -
Mycoplasma fermentans
Length = 228
Score = 31.9 bits (69), Expect = 8.2
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 51 WMIIRNNNAFLVKKRNIKKPFSKEP--NNVTNLHSFRYNGLIHKK--AVGVVENPDRKGF 218
WM + N + L+K+ N+K P ++ N+ +F++NG ++++ V V+ N +
Sbjct: 10 WMSLVNKDNLLIKEENLKPKKIVFPLIGSIINVQAFKFNGELYRQWNGVKVLRNTPQHYV 69
Query: 219 TVVYK 233
+YK
Sbjct: 70 LFMYK 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,246,523
Number of Sequences: 1657284
Number of extensions: 8832906
Number of successful extensions: 23997
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 23287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23971
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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