Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0454
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   1.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   1.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.3  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 367 RVMQLYKIITKTSEDNHEYERIKQDLYEALSILPNKTHPFVEGKF 501
           R + LY    +  +   E E +++ +Y  L      THP   G+F
Sbjct: 317 RAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRF 361


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 541 KSFFLFISWTMEVQTFLLQKDGFYLVRYLALHINPALF 428
           K+F +  S   E +TF ++KD   ++   A+H +P  F
Sbjct: 354 KNFVIEASKPHE-RTFTVEKDTMVMISMFAIHRDPQYF 390


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 585 LNLMRIEKLGHTCGHKSYYFF 647
           LN +RI + G    HKS YF+
Sbjct: 37  LNTLRIGRKGELKQHKSDYFY 57


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 585 LNLMRIEKLGHTCGHKSYYFF 647
           LN +RI + G    HKS YF+
Sbjct: 37  LNTLRIGRKGELKQHKSDYFY 57


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 540 NLSFYLFHGQW 508
           N+  Y FHGQW
Sbjct: 704 NVMTYDFHGQW 714



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 540 NLSFYLFHGQW 508
           NL  Y FHG+W
Sbjct: 275 NLMAYDFHGKW 285


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 412 NHEYERIKQDLYEAL 456
           NH+YE+I ++ +E++
Sbjct: 273 NHKYEKIDKEEHESM 287


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = -3

Query: 428 LSYS*LSSEVFVIILYNCITLSISPTPFRILIFCFI 321
           LSY+ +   +   IL+NC    ++   F+ + +  +
Sbjct: 274 LSYTVIQEVMLFTILWNCQNTRVASEDFKAIWYSIL 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,596
Number of Sequences: 336
Number of extensions: 3242
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)