Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0454
         (682 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0599 + 20897093-20898357,20898507-20898589,20899840-208999...    28   7.9  
06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171     28   7.9  

>12_02_0599 +
           20897093-20898357,20898507-20898589,20899840-20899903,
           20900057-20900354,20900385-20900426
          Length = 583

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 550 YSPKSFFLFISWTM---EVQTFLLQKDGFYLVRYLALHINPALFFRIHDYP 407
           Y+P+S F  + WT+   E+   + +KD      YL   + P   + + ++P
Sbjct: 289 YTPESGFTIVCWTLRMDEMDKMVWEKDAVLKSDYLWSMLKPDFLWPLDEFP 339


>06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171
          Length = 916

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 271 YPNYNLQYYCNPKNHEEIKQ 330
           +PN NL  + +PK+HE I Q
Sbjct: 694 FPNGNLDMWLHPKSHEHISQ 713


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,761,685
Number of Sequences: 37544
Number of extensions: 264105
Number of successful extensions: 690
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)