Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0454
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14823-2|CAA75101.1|  322|Drosophila melanogaster seryl-tRNA syn...    48   9e-06
AY119252-1|AAM51112.1|  417|Drosophila melanogaster SD21818p pro...    48   9e-06
AE014297-2015|AAF55175.1|  417|Drosophila melanogaster CG4938-PA...    48   9e-06

>Y14823-2|CAA75101.1|  322|Drosophila melanogaster seryl-tRNA
           synthetase protein.
          Length = 322

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +3

Query: 561 EFSEITRLLNLMRIEKLGHTCGHKSYYFFGELAD*REALL 680
           EFSE+ R LNL R++ LG+  GHKSYY  G+LA   +A++
Sbjct: 24  EFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAII 63


>AY119252-1|AAM51112.1|  417|Drosophila melanogaster SD21818p
           protein.
          Length = 417

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +3

Query: 561 EFSEITRLLNLMRIEKLGHTCGHKSYYFFGELAD*REALL 680
           EFSE+ R LNL R++ LG+  GHKSYY  G+LA   +A++
Sbjct: 119 EFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAII 158


>AE014297-2015|AAF55175.1|  417|Drosophila melanogaster CG4938-PA
           protein.
          Length = 417

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +3

Query: 561 EFSEITRLLNLMRIEKLGHTCGHKSYYFFGELAD*REALL 680
           EFSE+ R LNL R++ LG+  GHKSYY  G+LA   +A++
Sbjct: 119 EFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAII 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,656,322
Number of Sequences: 53049
Number of extensions: 482074
Number of successful extensions: 1093
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)