Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0453
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    26   0.19 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.6  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 448 RDMTPANLSGYVSAAYRANAPP*EKPPSRTLSAGTPA 338
           R M   + +GY   +Y AN PP  K   + LS   P+
Sbjct: 77  RPMHQNSYTGYHLGSYAANCPPSPKDDEKCLSLERPS 113


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 436 PANLSGYVSAAYRANAPP*EKPPSRTLSAGTPALTSS 326
           PA  S     +      P   PP  T S+G+PA  +S
Sbjct: 13  PAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVAS 49



 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 379 EKPPSRTLSAGTPALTSSAINP 314
           E PP    SA TP  +S   +P
Sbjct: 9   ESPPPAPQSAATPISSSGMTSP 30


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 362 NFICRHTGFN 333
           NF+ RHTGF+
Sbjct: 307 NFLKRHTGFS 316


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 122 VSPKPCKNISDAVCLACAAIITGFGSILQFITGKSI 15
           VS +   ++S  +    A     FG+ L  ITGKSI
Sbjct: 216 VSLRQIGSLSQLLSETVALFNDVFGTCLILITGKSI 251


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 122 VSPKPCKNISDAVCLACAAIITGFGSILQFITGKSI 15
           VS +   ++S  +    A     FG+ L  ITGKSI
Sbjct: 216 VSLRQIGSLSQLLSETVALFNDVFGTCLILITGKSI 251


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 436 PANLSGYVSAAYRANAPP*EKPPSRTLSAG 347
           P N+ G+V      + PP    PS  LS+G
Sbjct: 59  PMNMQGFVKQQTAPHGPPYAPHPS--LSSG 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,521
Number of Sequences: 336
Number of extensions: 2835
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)