Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0453
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 71 5e-13
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 71 5e-13
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 68 6e-12
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 66 2e-11
04_04_1530 - 34182235-34182336,34182436-34182543,34183627-341837... 48 5e-06
04_04_1532 - 34187153-34187308,34187426-34187551,34187856-341879... 42 4e-04
04_04_1531 - 34184899-34185030,34185130-34185240,34185344-341854... 39 0.003
08_02_1422 - 26971803-26971900,26974083-26975061 32 0.36
05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130 31 0.83
01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597 31 0.83
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 29 2.5
11_01_0327 - 2446949-2446999,2447060-2447299,2447542-2447813,244... 29 2.5
05_04_0076 - 17697893-17697922,17698312-17698707 29 2.5
02_01_0636 + 4768852-4769775,4770638-4771021 29 3.4
08_01_0074 + 530207-532603 28 4.4
01_07_0275 + 42434082-42435152 28 5.9
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808... 27 7.7
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 27 7.7
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 71.3 bits (167), Expect = 5e-13
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +1
Query: 61 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 240
++ + RH A++++LHGLGD G W+ + + P++K ICPTA+T PVT GF +W
Sbjct: 24 VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATQPVTAFGGFPCTAW 83
Query: 241 FDL 249
FD+
Sbjct: 84 FDV 86
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 71.3 bits (167), Expect = 5e-13
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +1
Query: 61 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 240
I+ + RH A++++LHGLGD G W+ + + P++K ICPTA+T PVT GF +W
Sbjct: 24 IVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATRPVTAFGGFPCTAW 83
Query: 241 FDL 249
FD+
Sbjct: 84 FDV 86
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 67.7 bits (158), Expect = 6e-12
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +1
Query: 61 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 240
++ + RH A++++LHGLGD G W+ + + P++K ICPTA T PV GF +W
Sbjct: 57 VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLPLPNIKWICPTAPTRPVAAFGGFPCTAW 116
Query: 241 FDL 249
FD+
Sbjct: 117 FDV 119
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 65.7 bits (153), Expect = 2e-11
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +1
Query: 61 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 240
++ + H A++++LHGLGD G W+ + + P++K ICPTA T PV + GF +W
Sbjct: 25 VVRPKGAHKATIVWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAVFGGFPSTAW 84
Query: 241 FDL 249
FD+
Sbjct: 85 FDV 87
>04_04_1530 -
34182235-34182336,34182436-34182543,34183627-34183748,
34183817-34183961,34184045-34184097,34184187-34184478
Length = 273
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 40 RMEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVI---CPTASTMPVT 210
R+ P P+ AA AR+ + +++LHGLGD+G P ++ P+A PV+
Sbjct: 37 RLVPAPMAAAA-ARNRSFVLWLHGLGDSGPANEPIRNFFSAPEFRLTKWAFPSAPNSPVS 95
Query: 211 LNNGFRMPSWFDL 249
N+G MPSWFD+
Sbjct: 96 CNHGAVMPSWFDI 108
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +3
Query: 255 LDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGG-------XXXXXXXX 413
+ + +P+D+ G+ +A + VH +I EV G+P + + + GFSQGG
Sbjct: 113 MSSGSPQDDSGVLKAVENVHAMIDKEVADGIPPENIFVCGFSQGGRTSALHCALTLASVL 172
Query: 414 TYPERLAGVMSLSCWXP 464
YP+ L G S W P
Sbjct: 173 LYPKTLGGGAVFSGWLP 189
>04_04_1532 -
34187153-34187308,34187426-34187551,34187856-34187977,
34188058-34188181,34189671-34189821,34190506-34190720,
34191142-34191343,34191423-34191597,34191746-34192055,
34192141-34192356
Length = 598
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +3
Query: 276 DEDGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSC 455
DE+ + RA VH +I E+ AG V + G SQGG +P+ L G S
Sbjct: 428 DEEDVLRAVQSVHAMIDREIAAGTNPQDVFVFGLSQGGALGIASVLLHPKTLGGCAVFSG 487
Query: 456 WXPXHGYF 479
+ P + F
Sbjct: 488 FLPFNSSF 495
>04_04_1531 -
34184899-34185030,34185130-34185240,34185344-34185465,
34185541-34185664,34185815-34185867,34185984-34186146
Length = 234
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +3
Query: 255 LDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLA 434
+ A DE + +A + VH ++ EV AG + + G SQGG YP L
Sbjct: 70 ITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAIASVLLYPMTLG 129
Query: 435 GVMSLS 452
G + S
Sbjct: 130 GCVVFS 135
>08_02_1422 - 26971803-26971900,26974083-26975061
Length = 358
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 103 LHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNG 222
LHG GD G W+S++ + PHV + P + N G
Sbjct: 112 LHGYGDNGESWSSSLEQVPLPHVYPL-PVIEEFGIVPNGG 150
>05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130
Length = 285
Score = 30.7 bits (66), Expect = 0.83
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 342 GVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWXPXHG 473
G ++V+L G SQGG +PER+A V+ L+ P G
Sbjct: 90 GDDEERVVLVGHSQGGFSVALAAERFPERVAAVVFLTAAMPPVG 133
>01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597
Length = 263
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 348 PADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWXPXH 470
P +KV+L G S GG +P+++A + L + P H
Sbjct: 75 PGEKVVLVGHSLGGINVALAAELFPDKIAAAVFLCAFMPDH 115
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 192 FDYARDAQQRFPYALVV*FKNLDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLL 368
+D A+Q P + + LDA APE +DG E + + + + A P D+VL+
Sbjct: 487 YDVFSSAKQAAPAVIFI--DELDAIAPERKDGSEELSIRIVVTLLKLIDAMSPRDRVLV 543
>11_01_0327 -
2446949-2446999,2447060-2447299,2447542-2447813,
2447917-2447956,2448057-2448134,2448212-2448271,
2448434-2448493,2449620-2449766,2449921-2450018,
2450455-2450582,2451275-2451321
Length = 406
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 237 VV*FKNLDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLLGGF 377
VV NL ++ + E+ + + D +H +A+ V G P D +G F
Sbjct: 324 VVGICNLQQSSQQAEEALSQGLDQLHQSLAETVAGGSPLDDPNVGSF 370
>05_04_0076 - 17697893-17697922,17698312-17698707
Length = 141
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 354 DKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWXPXHG 473
++V+L G S GG +PERLA V+ L+ P G
Sbjct: 84 ERVVLVGHSHGGFSVALAAEWFPERLAAVVFLTASMPPVG 123
>02_01_0636 + 4768852-4769775,4770638-4771021
Length = 435
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 1 DKLAHIDFPVINWRMEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTI 147
D +D P+++ R+ PV++A+ A + H + W+STI
Sbjct: 66 DLARRLDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTI 114
>08_01_0074 + 530207-532603
Length = 798
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 276 DEDGIERATDLVHGLIADEVKAGVPADKV 362
DE+ ++A L+H ++AD+ + G P D V
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVV 207
>01_07_0275 + 42434082-42435152
Length = 356
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 166 HVKVICPTASTMPVTLNNGFRMPSWFD 246
H+KV CP +T T+N+ R P+ FD
Sbjct: 235 HLKVTCPVLNTNDTTVND-IRTPNTFD 260
>12_02_0893 +
24077634-24078379,24079347-24080412,24080741-24080866,
24081278-24081384,24081720-24081744
Length = 689
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 415 VSAAYRANAPP*EKPPSRTLSAGTPALTSSAIN 317
+S AY A APP PPSR + G ++ +++
Sbjct: 350 LSNAYLATAPPPPPPPSRQATTGNSQTSTVSVS 382
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 7 LAHIDFPVINWRMEPNPVIIAAQARHTASLIFLHGLGDTGHGWAST 144
+ I PV+NW + +II A R T + +G+ + G ST
Sbjct: 496 MGQIYIPVMNWFLMVMCIIIVATFRSTNDIANAYGIAEVGVMMVST 541
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,632,682
Number of Sequences: 37544
Number of extensions: 329505
Number of successful extensions: 913
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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