Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0453
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-3|CAB00042.2|  223|Caenorhabditis elegans Hypothetical pr...    84   8e-17
AY691524-1|AAU01163.1|  213|Caenorhabditis elegans acyl protein ...    84   8e-17
AY691523-1|AAU01162.1|  213|Caenorhabditis elegans acyl protein ...    84   8e-17
Z54342-13|CAH60747.1|  123|Caenorhabditis elegans Hypothetical p...    30   0.99 
Z54342-12|CAA91145.2|  758|Caenorhabditis elegans Hypothetical p...    30   0.99 
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    29   2.3  
U42436-4|AAF99896.2|  297|Caenorhabditis elegans Hypothetical pr...    29   3.0  
DQ407523-1|ABD85015.1|  856|Caenorhabditis elegans OGA-1c protein.     28   4.0  
DQ407522-1|ABD85014.1|  854|Caenorhabditis elegans OGA-1b protein.     28   4.0  
DQ407521-1|ABD85013.1|  870|Caenorhabditis elegans OGA-1d protein.     28   4.0  
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U28742-3|AAA68333.3|  837|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.      27   9.2  

>Z75712-3|CAB00042.2|  223|Caenorhabditis elegans Hypothetical
           protein K04G2.5 protein.
          Length = 223

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52  NPVIIAAQARHTASLIFLHGLGDTGHGWASTI-AGIRGPHVKVICPTASTMPVTLNNGFR 228
           NP I++ +  H  +LIFLHGLGD GHGWA       +  ++K ICP +S  PVTLN G R
Sbjct: 8   NPSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMR 67

Query: 229 MPSWFDL 249
           MP+WFDL
Sbjct: 68  MPAWFDL 74



 Score = 79.0 bits (186), Expect = 2e-15
 Identities = 38/81 (46%), Positives = 47/81 (58%)
 Frame = +3

Query: 255 LDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLA 434
           LD  A EDE GI RAT  VH LI  EV AG+PA ++ +GGFS GG        TYP++L 
Sbjct: 77  LDPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLG 136

Query: 435 GVMSLSCWXPXHGYFPGGLKA 497
           G++ LS +      FPG   A
Sbjct: 137 GIVGLSSFFLQRTKFPGSFTA 157


>AY691524-1|AAU01163.1|  213|Caenorhabditis elegans acyl protein
           thioesterase 1 protein.
          Length = 213

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52  NPVIIAAQARHTASLIFLHGLGDTGHGWASTI-AGIRGPHVKVICPTASTMPVTLNNGFR 228
           NP I++ +  H  +LIFLHGLGD GHGWA       +  ++K ICP +S  PVTLN G R
Sbjct: 8   NPSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMR 67

Query: 229 MPSWFDL 249
           MP+WFDL
Sbjct: 68  MPAWFDL 74



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 38/81 (46%), Positives = 46/81 (56%)
 Frame = +3

Query: 255 LDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLA 434
           LD  A EDE GI RAT  VH LI  EV AG+PA ++ +GGFS GG        TYP++L 
Sbjct: 77  LDPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLG 136

Query: 435 GVMSLSCWXPXHGYFPGGLKA 497
           G++ LS        FPG   A
Sbjct: 137 GIVGLSSXFLQRTKFPGSFTA 157


>AY691523-1|AAU01162.1|  213|Caenorhabditis elegans acyl protein
           thioesterase 1 protein.
          Length = 213

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52  NPVIIAAQARHTASLIFLHGLGDTGHGWASTI-AGIRGPHVKVICPTASTMPVTLNNGFR 228
           NP I++ +  H  +LIFLHGLGD GHGWA       +  ++K ICP +S  PVTLN G R
Sbjct: 8   NPSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMR 67

Query: 229 MPSWFDL 249
           MP+WFDL
Sbjct: 68  MPAWFDL 74



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 38/81 (46%), Positives = 46/81 (56%)
 Frame = +3

Query: 255 LDATAPEDEDGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLA 434
           LD  A EDE GI RAT  VH LI  EV AG+PA ++ +GGFS GG        TYP++L 
Sbjct: 77  LDPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLG 136

Query: 435 GVMSLSCWXPXHGYFPGGLKA 497
           G++ LS        FPG   A
Sbjct: 137 GIVGLSSXFLQRTKFPGSFTA 157


>Z54342-13|CAH60747.1|  123|Caenorhabditis elegans Hypothetical
           protein C08H9.3b protein.
          Length = 123

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  AYIFTRFG*HRSWMGKHDCWHQRPSCQSYMSYGFDYARDAQQRFPY 230
           AY+ T F  HR+WM     W QRP C+ Y     ++  D    F Y
Sbjct: 24  AYVSTDFEVHRNWMAV--TW-QRPLCEWYTEATSEWTLDYPPFFAY 66


>Z54342-12|CAA91145.2|  758|Caenorhabditis elegans Hypothetical
           protein C08H9.3a protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  AYIFTRFG*HRSWMGKHDCWHQRPSCQSYMSYGFDYARDAQQRFPY 230
           AY+ T F  HR+WM     W QRP C+ Y     ++  D    F Y
Sbjct: 24  AYVSTDFEVHRNWMAV--TW-QRPLCEWYTEATSEWTLDYPPFFAY 66


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -1

Query: 393 MLHLERNHQAELYLQAHRL*LHQQSTHGRDQWLSQYRLHLQEL*RPGS*IKPRGHTETVV 214
           + H  +NHQ    L A      +  T G +++  + R   QEL    S I P+ HT+  +
Sbjct: 17  LAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNR---QELSARNSKIHPKNHTDLPI 73

Query: 213 ERHGHSRSRRTYN 175
            +  H R  R ++
Sbjct: 74  YKPRHPRGSRNHH 86


>U42436-4|AAF99896.2|  297|Caenorhabditis elegans Hypothetical
           protein C49H3.9 protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 246 FKNLDATAPEDEDGIERATDLVHGLIADEVKAGVPAD 356
           F+ ++ TA E  DGI+R       +I +++KA +P+D
Sbjct: 141 FRIVEPTAKEVMDGIQRRLSDSKKIIDEDLKADIPSD 177


>DQ407523-1|ABD85015.1|  856|Caenorhabditis elegans OGA-1c protein.
          Length = 856

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 130 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWFDLRTWTLQ 267
           G A+T   IR   + ++C T     +   NG R+ S F    W +Q
Sbjct: 448 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRWLMQ 493


>DQ407522-1|ABD85014.1|  854|Caenorhabditis elegans OGA-1b protein.
          Length = 854

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 130 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWFDLRTWTLQ 267
           G A+T   IR   + ++C T     +   NG R+ S F    W +Q
Sbjct: 448 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRWLMQ 493


>DQ407521-1|ABD85013.1|  870|Caenorhabditis elegans OGA-1d protein.
          Length = 870

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 130 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWFDLRTWTLQ 267
           G A+T   IR   + ++C T     +   NG R+ S F    W +Q
Sbjct: 464 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRWLMQ 509


>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
           protein F22B5.7 protein.
          Length = 1415

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 436 PANLSGYVSAAYRANAPP*EKPPSRT 359
           PA ++  V + ++A+APP   PP +T
Sbjct: 529 PAEIAEMVKSIHKADAPPAAAPPKKT 554


>U28742-3|AAA68333.3|  837|Caenorhabditis elegans Hypothetical
           protein T20B5.3 protein.
          Length = 837

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 130 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWF-DLRT 255
           G A+T   IR   + ++C T     +   NG R+ S F D RT
Sbjct: 448 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRT 490


>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
          Length = 1415

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 436 PANLSGYVSAAYRANAPP*EKPPSRT 359
           PA ++  V + ++A+APP   PP +T
Sbjct: 529 PAEIAEMVKSIHKADAPPAAAPPKKT 554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,942,408
Number of Sequences: 27780
Number of extensions: 267434
Number of successful extensions: 694
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)