Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0453
         (561 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   6.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   8.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.5  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 302 SGSLNTVFIFRSCSVQVLKSNHEG 231
           +G  +T  ++ SC +Q    +H+G
Sbjct: 129 NGHPSTPIVYASCKLQAAAVDHQG 152


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 363 ELYLQAHRL*LHQQSTHGRDQWLSQY 286
           E  L A  L L  +S HG  +W +Q+
Sbjct: 4   EFVLLASLLYLGNESVHGIQKWGTQF 29


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 156 QRPSCQSYMSYGFDYARDAQQRFP 227
           Q+PS ++Y    F Y  D  Q  P
Sbjct: 451 QQPSIRTYTQQQFPYVHDTLQIQP 474


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 432 AGVMSLSCWXPXHGYFPG 485
           A V+  SC+   + YFPG
Sbjct: 92  ATVLPNSCYQERYEYFPG 109


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 432 AGVMSLSCWXPXHGYFPG 485
           A V+  SC+   + YFPG
Sbjct: 92  ATVLPNSCYQERYEYFPG 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,878
Number of Sequences: 438
Number of extensions: 3289
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)