Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0450
         (852 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5GF29 Cluster: Putative late transcription factor; n=1...    39   0.18 
UniRef50_UPI00006CF302 Cluster: hypothetical protein TTHERM_0006...    35   2.3  

>UniRef50_Q5GF29 Cluster: Putative late transcription factor; n=1;
           Diachasmimorpha longicaudata entomopoxvirus|Rep:
           Putative late transcription factor - Diachasmimorpha
           longicaudata entomopoxvirus
          Length = 213

 Score = 38.7 bits (86), Expect = 0.18
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = -3

Query: 304 MCKKFN*NILYIACPAKLLMIDSVCTIMYYDFVEHYYLQIVSRQHIIMSNYYIYVAIS-- 131
           +  ++N NI +  C  K   I  + T  + DF   YY  +    H +++  Y Y+ I   
Sbjct: 106 LLNRYN-NIDFYLCRTKKEYIKIIFT-EFIDFFTKYYTGVAISYHTLLTRIYSYLLIETN 163

Query: 130 -VPLLTKIKQHQISL---KFLLKTRAEPERAASPL 38
             P LTK   H I L   KFLL T  +     +PL
Sbjct: 164 LTPSLTKNNNHDIELIFDKFLLYTNKKRVTQGTPL 198


>UniRef50_UPI00006CF302 Cluster: hypothetical protein
           TTHERM_00066720; n=2; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00066720 - Tetrahymena
           thermophila SB210
          Length = 1267

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -3

Query: 283 NILYIACPAKLLMIDSVCTIMYYDFVEHYYLQIVSRQHIIMSNYYIYVAISVPLLTKIKQ 104
           N++ I    K + I + C++  ++  ++ Y+ +  + H++   YY+ +A+S+P   KI Q
Sbjct: 88  NVIKIPYQNKSIQILN-CSLCLFNLAQNIYILLFIKDHLVKV-YYLLIALSIPFCYKIAQ 145

Query: 103 HQIS--LKFLL 77
             I   L FL+
Sbjct: 146 SLIEARLNFLI 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,487,207
Number of Sequences: 1657284
Number of extensions: 15663390
Number of successful extensions: 30668
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30663
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)