Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0450
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0914 + 9010613-9013316,9013537-9013748                           31   0.88 
01_03_0149 + 13194866-13195012,13196576-13196828,13197810-131981...    28   8.2  

>08_01_0914 + 9010613-9013316,9013537-9013748
          Length = 971

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 831 RANRFN--GNFMEGARYQTFATRSPLARIFLNGWNSHXIFKQDYG 703
           R NRFN   N  EG    TF+  S L  + L G N H I  ++ G
Sbjct: 276 RINRFNTLANHFEGIIPPTFSNASALESLLLRGNNYHGIIPREIG 320


>01_03_0149 +
           13194866-13195012,13196576-13196828,13197810-13198173,
           13198283-13198501,13199888-13200002,13200697-13200948,
           13201149-13201442
          Length = 547

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 509 VFTWCVFYPNIIKRKDLFVSLS 444
           +F W + YP++ K  D+FV LS
Sbjct: 422 IFEWILSYPSLFKTFDIFVRLS 443


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,401,439
Number of Sequences: 37544
Number of extensions: 396375
Number of successful extensions: 758
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)